CF835357
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_PEA (Arginine decarboxylase OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.686e-54 Identity = 111/188 (59.04%), Postives = 125/188 (66.49%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDA----VVDSSPNEDEQWSY 554 KID FIGG +SLPLHEM G G G YYLGMFLGG+YEEALGG+HNLFGGPSVVRVLQSDGPH FAVTRA+ G SC DVLRVMQHEP+LMFETLKHRA E+CGQ + Q F +MPYLV ++C L A+ N G YYC+G+D+ A V S EDE WSY Sbjct: 557 KIDKFIGGESSLPLHEMEGHG----GGYYLGMFLGGSYEEALGGLHNLFGGPSVVRVLQSDGPHGFAVTRAVAGSSCADVLRVMQHEPQLMFETLKHRALEFCGQH------------DDDSVVNAGVLANSLAQSFDNMPYLVSSTTCCLNALTNNNGFYYCSGDDFSADTVSVATSVAGEDENWSY 728
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_ARATH (Arginine decarboxylase 1 OS=Arabidopsis thaliana GN=SPE1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 9.274e-45 Identity = 103/185 (55.68%), Postives = 116/185 (62.70%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSC-SLTAINNGGGLYYCNGEDYDAVVDSSPNEDEQWSY 554 KI+ FIGG +SLPLHEM GC G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPH FAVTRA+ G S DVLR MQHEPELMF+TLKHRAEE + + F++MPYL + +S +LTA N G+YYC D A +DE WSY Sbjct: 529 KINKFIGGESSLPLHEMDNNGCSG-GRYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHGFAVTRAVMGQSSADVLRAMQHEPELMFQTLKHRAEEPRNNNNKACGDKG---------NDKLVVASCLAKSFNNMPYLSMETSTNALTAAVNNLGVYYC---DEAAAGGGGKGKDENWSY 700
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_SOYBN (Arginine decarboxylase OS=Glycine max PE=2 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.603e-44 Identity = 101/184 (54.89%), Postives = 113/184 (61.41%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSCSLTAINNGGGLYYCNGEDYDAVVDSSPNEDEQWSY 554 KID FI G +SLPLHEM GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVTRA+PGPSCGDVLRVMQH+PELMFETLKHRA+EY ++ + F MPYL+ SS +D A V ++ + EQWSY Sbjct: 545 KIDKFINGESSLPLHEMEGGRT-----YYLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGPSCGDVLRVMQHQPELMFETLKHRAQEYVSHDN-----------------AAALLAAGLARTFDRMPYLLSLSSFV--------------ADDVAAAVPAAQDLGEQWSY 692
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_DIACA (Arginine decarboxylase OS=Dianthus caryophyllus GN=ADC PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.851e-44 Identity = 104/195 (53.33%), Postives = 119/195 (61.03%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPSSCSLTAINNGGGL------YYCNGED--YDAVVDSSPNEDEQWSYCYA 563 KID FIG +SLPLHE+ GG YYLGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGP S+AVTRA+PGPS DVLRVM HEPELMF+TLKHRAEE C ++ Q F+S PYLV + +NG GL Y+ +D A VD++ E+EQWSY A Sbjct: 554 KIDKFIGDESSLPLHELSGGE-----GYYLGMFLGGAYEEALGGVHNLFGGPSVVRVQQSDGPQSYAVTRAVPGPSSSDVLRVMHHEPELMFQTLKHRAEE-CDNDY-----------------TAGPLADMLAQSFNSTPYLVPGHATGSCGFSNGSGLVNGCREYFYGVDDGCNAAAVDAAAGEEEQWSYVCA 725
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE2_ARATH (Arginine decarboxylase 2 OS=Arabidopsis thaliana GN=SPE2 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.481e-42 Identity = 97/174 (55.75%), Postives = 111/174 (63.79%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCGQEHXXXXXXXXXXXXXXXMXXXXXXXXXXXQYFHSMPYLVVPS---SCSLTAINNGGGLYYCNGEDYDAV 515 KI+ FIGG +SLPLHE+ G G G Y+LGMFLGGAYEEALGGVHNLFGGPSVVRV QSDGPHSFAVTRA+PG S DVLR MQHEPELMF+TLKHRAEE + + FH+MPYL S SL+A + G YYC+ + YD + Sbjct: 542 KINKFIGGESSLPLHELDKNGSG--GRYFLGMFLGGAYEEALGGVHNLFGGPSVVRVSQSDGPHSFAVTRAVPGQSSADVLRAMQHEPELMFQTLKHRAEEMMHTKGGSEGENEEEEED----DEFNNVAASLDRSFHNMPYLATEQASPSNSLSAAISNLGFYYCDEDVYDYI 709
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_BRAJU (Arginine decarboxylase OS=Brassica juncea GN=ADC1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.438e-38 Identity = 79/101 (78.22%), Postives = 83/101 (82.18%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEE 305 KI+ FIGG +SLPLHE+ G YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQ DGPH FAVTRAM G S DVLR MQHEPELMF+TLKHRAEE Sbjct: 535 KINKFIGGESSLPLHELDNNG------YYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQKDGPHGFAVTRAMMGQSSADVLRAMQHEPELMFQTLKHRAEE 629
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_ORYSJ (Arginine decarboxylase OS=Oryza sativa subsp. japonica GN=ADC1 PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.101e-35 Identity = 75/100 (75.00%), Postives = 81/100 (81.00%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAE 302 K+D FIGG SLPLHE+ G RG YYLGMFLGGAY+EALGG+HNLFGGPSVVRV QSDGPH FAVTRA GPSC DVLR MQHEPE+MFE LK R + Sbjct: 545 KVDHFIGGRHSLPLHELPVHGT--RG-YYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQSDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTD 641
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPE1_SOLLC (Arginine decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.626e-23 Identity = 52/67 (77.61%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFA 203 K+D FIGG +SLPLHE+ G G+ G YYLGMFLGGAYEEALGG+HNLFGGPSVVRV+QSD PHSFA Sbjct: 439 KVDKFIGGESSLPLHEI---GSGDGGRYYLGMFLGGAYEEALGGLHNLFGGPSVVRVMQSDSPHSFA 502
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPEA_SYNR3 (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain RCC307) GN=speA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.800e-14 Identity = 42/104 (40.38%), Postives = 61/104 (58.65%), Query Frame = 3 Query: 3 KIDTFIGGGTSLPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAEEYCG 314 K+ FI G++ PL E+ GE PY++G+FLGGAY+E +G +HNLFG + V + S G + V + G + DVL M+H PE + E L+ +EE G Sbjct: 512 KLARFIASGSAKPLLELHELKDGE--PYWIGLFLGGAYQEVMGNLHNLFGSTNAVSIRLSPG-GPYRVEHVVRGQTNSDVLEAMEHNPEALLERLRQASEEAIG 612
BLAST of CF835357 vs. ExPASy Swiss-Prot
Match: SPEA_SYNPX (Biosynthetic arginine decarboxylase OS=Synechococcus sp. (strain WH8102) GN=speA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.223e-12 Identity = 39/103 (37.86%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 3 KIDTFIGGGTS---LPLHEMVGGGCGERGPYYLGMFLGGAYEEALGGVHNLFGGPSVVRVLQSDGPHSFAVTRAMPGPSCGDVLRVMQHEPELMFETLKHRAE 302 ++D FIG G L LHE+ + PY +G+FL GAY+E +G +HNLFG + V + S G S+ + + G + DVL M+H+P ++ E L+ AE Sbjct: 516 RLDRFIGDGQPKQLLELHEL-----DDNNPYLIGLFLSGAYQEVMGNLHNLFGTTNAVHIRLSPG-GSYRIDHVVRGDTNADVLEAMEHDPRVLLERLRVAAE 612 The following BLAST results are available for this feature:
BLAST of CF835357 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835357 ID=CF835357; Name=CF835357; organism=Citrus sinensis; type=EST; length=719bpback to top |