CF835444

Overview
NameCF835444
Unique NameCF835444
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length784
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3712 contig Csv1_Contig3712:7..790. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: PHAE_PHAVU (Erythroagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=DLEC1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.750e-16
Identity = 68/221 (30.77%), Postives = 94/221 (42.53%), Query Frame = 3
Query:  150 AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 776
            A   S G L LT+      P    L  +GR  YS P+  W       A   T+FT  I   PN +  ADG+ FV     S P +                A    VE DT  N +W DP   H+GID+     N  KS+ ++  D   G   +V I YD  TK+L   + Y       ++   + L   +P  V VGFTA+TG      E++ +L W+F +
Sbjct:   43 ATVSSKGQLRLTNVNDNGEPT---LSSLGRAFYSAPIQIWDNTTGAVAASPTSFTFNID-VPNNSGPADGLAFVLLPVGSQPKDKGGLLGLFNNYKYDSNAHTVAVEFDTLYNVHW-DPKPRHIGIDV-----NSIKSIKTTTWDFVKGENAEVLITYDSSTKLLVASLVYPSLKTSFIVSDTVDLKSVLPEWVIVGFTATTGITKGNVETNDILSWSFAS 253          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC1_MEDTR (Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 70/227 (30.84%), Postives = 107/227 (47.14%), Query Frame = 3
Query:  132 SLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX-----AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 770
            +LI  G A+T S G L LT               +GR LYS P+  W       A   T FT  I+  P +++ ADG+ F  A  DT P                        AVE+DT+ N +  DP  N H+GI++     N  KS+ ++   L++GR   V + +D  T +L V ++Y G P   ++   + L + +P  V +GF+A+TG +F+E H +  W+F
Sbjct:   47 NLIFQGNAITTSTGKLQLTKAVK---------NSIGRALYSAPIHIWDSKTGDVANFETLFTFAITA-PYSSNVADGLAFFIAPVDTQPQNIGRAGFLGVFNSETYNKSIQTVAVEIDTFHNTW--DPKINRHIGINV-----NCIKSISTTSWVLENGREANVLVRFDAHTNVLSVVLSYPGLPDSYILSDVVPLKDIVPEWVRIGFSAATGAEFAE-HDIRYWSF 255          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC1_DOLBI (Seed lectin subunit I OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16
Identity = 67/227 (29.52%), Postives = 98/227 (43.17%), Query Frame = 3
Query:  132 SLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 776
            S I  G  T S G L LT       P    L   GR  YS P+      T   A  +T+FT++IS  P+    ADG+ F      S P                  A    VE DT+ N  W DP   H+GID+     N  KS+ +   DL +G   ++ I Y+  T +L   + +       ++   + ++  +P  V VGF+A+TG    + E+H VL W+F +
Sbjct:   37 SFILQGDATVSSGKLQLTKVKENGIPTPSSL---GRAFYSSPIQIYDKSTGAVASWATSFTVKISA-PSKASFADGIAFALVPVGSEPRRNGGYLGVFDSDVYNNSAQTVAVEFDTFSNSGW-DPSMKHIGIDV-----NSIKSIATVSWDLANGENAEILITYNAATSLLVASLVHPSRRTSYILSERVDITNELPEYVSVGFSATTGLSEGYIETHDVLSWSFAS 253          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LECS_VATMA (Seed lectin OS=Vatairea macrocarpa PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16
Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = 3
Query:  150 AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 776
            A+  S G L LT     +  D      +GR LY+ P+  W       A  +T+F+  +   P+ + +ADG+ F  A  DT P  +                 AVE DT+ N +  DP A H+GI++     N  +S+       ++G+   V+I Y+  TK L   + Y  N    ++   + L   +P  V VGF+A++G   D  E+H VLDW+FT+
Sbjct:   24 ALVTSKGKLQLTKVKDGKPVDH----SLGRALYAAPIHIWDDSTDRVASFATSFSFVVEA-PDESKTADGIAFFLAPPDTQPQKDGGFLGLFNDSNKSIQTVAVEFDTFSNTW--DPSARHIGINV-----NSIESMKYVKWGWENGKVANVYISYEASTKTLTASLTYPSNATSYIVSANVDLKSALPEWVRVGFSATSGLSRDHVETHDVLDWSFTS 230          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC5_DOLBI (Lectin DB58 OS=Dolichos biflorus PE=1 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16
Identity = 65/227 (28.63%), Postives = 100/227 (44.05%), Query Frame = 3
Query:  132 SLICMGAVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPV------TAWPAMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXXA----VELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 776
            S I  G  T S   L LT       P    L  +GR  YS P+      T   A  +T+FT  I   PN + SADG+ F      S P                  A    VE DT+ N  W DP + H+GID+     N  KS+ ++   L +G+  ++ I Y+  T +L   + +       ++   + ++  +P  V +GF+A+TG    ++E+H VL W+F +
Sbjct:   37 SFILQGDATVSSSKLRLTKVKGNGLPT---LSSLGRAFYSSPIQIYDKSTGAVASWATSFTANIFA-PNKSSSADGIAFALVPVGSEPKSNSGFLGVFDSDVYDNSAQTVAVEFDTFSNTDW-DPTSRHIGIDV-----NSIKSIRTASWGLANGQNAEILITYNAATSLLVASLVHPSRRTSYIVSERVDITNELPEYVSIGFSATTGLSEGYTETHDVLSWSFAS 253          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: PHAM_PHAVU (Leucoagglutinating phytohemagglutinin OS=Phaseolus vulgaris GN=PDLEC2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15
Identity = 69/226 (30.53%), Postives = 96/226 (42.48%), Query Frame = 3
Query:  132 SLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX--AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTG--PDFSESHQVLDWTFTT 776
            +LI  G A   S G L LT+  S   P    +  +GR  YS P+  W       A   T FT  I   PN    ADG+ F      S P +                  AVE DT  N  W DP   H+GID+     N  KS+ ++  D  +G   +VHI Y+  TK+L   + Y        +   + L   +P  V VGF+A+TG      E++ +L W+F +
Sbjct:   36 NLILQGDASVSSSGQLRLTNVNSNGEPT---VGSLGRAFYSAPIQIWDYTTGNVASFDTNFTFNIL-VPNNAGPADGLAFALVPVGSQPKDKGGFLGLFDGSNSNFHTVAVEFDTLYNKDW-DPRERHIGIDV-----NSIKSIKTTPWDFVNGENAEVHITYESSTKLLVASLVYPSLKTSFTVSDTVDLKSVLPEWVSVGFSATTGITKGNVETNDILSWSFAS 251          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC_SOYBN (Lectin OS=Glycine max GN=LE1 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:  150 AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP----AMISTTFTIRISPY-PNTTDSADGMTFVFAT-DTSPPTEXXXXXXXXXXXXXXXX-AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDF-SESHQVLDWTFTT 776
            A+  S G L L       +P    L   GR LYS P+  W     ++ S   +   + Y P+T   ADG+ F  A  DT P T                  AVE DT++N +  DP   H+GI++     N  +S+ ++  DL + +  +V I YD  T +L   + Y       ++   + L  ++P  V +GF+A+TG D   ESH VL W+F +
Sbjct:   56 AIVTSSGKLQLNKVDENGTPKPSSL---GRALYSTPIHIWDKETGSVASFAASFNFTFYAPDTKRLADGLAFFLAPIDTKPQTHAGYLGLFNENESGDQVVAVEFDTFRNSW--DPPNPHIGINV-----NSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVYPSQRTSNILSDVVDLKTSLPEWVRIGFSAATGLDIPGESHDVLSWSFAS 262          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC2_MEDTR (Truncated lectin 2 OS=Medicago truncatula GN=LEC2 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.328e-15
Identity = 70/229 (30.57%), Postives = 102/229 (44.54%), Query Frame = 3
Query:  159 PSYGYLSLTSDPSPESPDQLPLKK-----VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFAT-DTSPPT-----EXXXXXXXXXXXXXXXXAVELDTYKNDYWSDPDAN------HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQK--LIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 770
            P    L    D    S  +L L K     +GR LYS P+  W       A   TTFT  I+  PNT + ADG+ F  A  DT P +                      AVE+DT+ N  W     N      H+GID+     N  KS+ +    L++ +   V I ++G T +L V V Y   PL +   +   + L + +P  V +GF++STG ++S +H +L W+F
Sbjct:   39 PDQKNLIFQGDAKTASTGKLELSKAVKNSIGRALYSAPIHIWDSKTGSVANFQTTFTFTITA-PNTYNVADGLAFFIAPIDTKPKSIHHGGYLGVFDSKTYKKSIQTVAVEIDTFYNAQWDPNPGNISSTGRHIGIDV-----NSIKSISTVPWSLENNKKANVAIGFNGATNVLSVDVEY---PLIRHYTLSHVVPLKDVVPEWVRIGFSSSTGAEYS-AHDILSWSF 257          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LECB_SPAPA (Seed lectin beta chain OS=Spatholobus parviflorus PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.040e-15
Identity = 67/228 (29.39%), Postives = 98/228 (42.98%), Query Frame = 3
Query:  132 SLICMG-AVTPSYGYLSLTSDPSPESPDQLPLKKVGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFATDTSPPTEXXXXXXXXXXXXXXXX----AVELDTYKNDYWSDPDANHMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPD--FSESHQVLDWTFTT 776
            +LI  G A+    G L LT+  S   P+   L   GR  YS P+  W       A  +T+F   I   PN    ADG+ F  A   S P                      AVE DTY+N  ++DP   H+G D+     N   S+ +    L +G   +V I Y+   K+L   + Y  +    ++   + LS  +P  V VGF+A+TG    + E+H V  W+F +
Sbjct:   17 NLILQGDALVTVAGVLQLTNVDSNGVPEPSSL---GRATYSAPINIWDSATGLVASFATSFRFTIYA-PNIATIADGLAFFLAPVASAPDSGGGFLGLFDSAVGDTTYQTVAVEFDTYENTVFTDPPYTHIGFDV-----NSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLVYPSSKTSFILADIVDLSSVLPEWVRVGFSAATGASKGYIETHDVFSWSFAS 235          
BLAST of CF835444 vs. ExPASy Swiss-Prot
Match: LEC_VICFA (Favin OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15
Identity = 62/191 (32.46%), Postives = 90/191 (47.12%), Query Frame = 3
Query:  231 VGRVLYSQPVTAWP------AMISTTFTIRISPYPNTTDSADGMTFVFA-TDTSPPTEXXXXXXXXXXXXXXXX---AVELDTYKNDYWSDPDAN-HMGIDIANLTSNPAKSLDSSGIDLKSGRPIQVHIYYDGWTKILYVYVAYAGNPLQKLIERPILLSETIPSSVYVGFTASTGPDFSESHQVLDWTF 770
            VGR LYS P+  W       A  +TTF   I   PN  + ADG TF  A  DT P T                    AVE DT+ N  W   +   H+GID+     N  KS+ +   +L++G    V I ++  T +L V + Y  N     +   + L + +P  V +GF+A+TG +++ +H+VL WTF
Sbjct:   42 VGRALYSLPIHIWDSETGNVADFTTTFIFVIDA-PNGYNVADGFTFFIAPVDTKPQTGGGYLGVFNGKDYDKTAQTVAVEFDTFYNAAWDPSNGKRHIGIDV-----NTIKSISTKSWNLQNGEEAHVAISFNATTNVLSVTLLYP-NLTGYTLSEVVPLKDVVPEWVRIGFSATTGAEYA-THEVLSWTF 224          
The following BLAST results are available for this feature:
BLAST of CF835444 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
PHAE_PHAVU2.750e-1630.77Erythroagglutinating phytohemagglutinin OS=Phaseol... [more]
LEC1_MEDTR4.690e-1630.84Lectin 1 OS=Medicago truncatula GN=LEC1 PE=3 SV=1[more]
LEC1_DOLBI4.690e-1629.52Seed lectin subunit I OS=Dolichos biflorus PE=1 SV... [more]
LECS_VATMA6.126e-1629.68Seed lectin OS=Vatairea macrocarpa PE=1 SV=1[more]
LEC5_DOLBI8.000e-1628.63Lectin DB58 OS=Dolichos biflorus PE=1 SV=2[more]
PHAM_PHAVU1.782e-1530.53Leucoagglutinating phytohemagglutinin OS=Phaseolus... [more]
LEC_SOYBN1.782e-1529.95Lectin OS=Glycine max GN=LE1 PE=1 SV=1[more]
LEC2_MEDTR2.328e-1530.57Truncated lectin 2 OS=Medicago truncatula GN=LEC2 ... [more]
LECB_SPAPA3.040e-1529.39Seed lectin beta chain OS=Spatholobus parviflorus ... [more]
LEC_VICFA5.186e-1532.46Favin OS=Vicia faba PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01D22_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01D22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835444 ID=CF835444; Name=CF835444; organism=Citrus sinensis; type=EST; length=784bp
TTCGTCCCCATAAAATGATTTTCCTACTACTCCTTTCAATTTTTCTTCCC
TGTGCTTCTTCATCAATCCCTGTGGATCCACCTGTTAGCTTCTCATTTTC
CTCATTCAACCCAAAAAGTTGTAGCGATGGCAGCCTAATTTGCATGGGCG
CAGTGACTCCAAGTTATGGCTACTTGAGCCTCACATCAGACCCTTCACCA
GAATCGCCAGATCAGCTGCCGCTAAAAAAGGTTGGACGGGTTTTATACAG
CCAGCCTGTGACTGCATGGCCAGCTATGATTAGTACCACCTTCACCATTA
GGATCTCACCCTACCCAAATACAACGGATTCTGCAGATGGCATGACGTTT
GTTTTTGCAACCGATACCAGCCCTCCAACTGAAAACTCCGCCGGCGGAAA
TCTTGGACTGAGTAACGGTGTTTCGCAATTAGCCGTGGAGCTGGACACTT
ACAAGAACGACTACTGGTCTGATCCAGATGCTAACCATATGGGCATTGAC
ATAGCAAACTTAACATCGAATCCAGCCAAGAGTCTCGACAGCTCTGGTAT
TGATCTCAAAAGTGGAAGACCGATCCAGGTTCACATTTATTACGATGGAT
GGACGAAAATACTCTATGTTTATGTGGCATATGCGGGGAACCCACTTCAG
AAGCTTATTGAAAGACCTATCCTCTTGTCAGAAACAATTCCAAGCTCAGT
CTATGTTGGCTTCACAGCATCCACAGGGCCCGACTTTTCAGAAAGCCATC
AGGTGCTTGATTGGACCTTCACAACGTTCCCATT
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