CF835445

Overview
NameCF835445
Unique NameCF835445
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length598
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4678 contig Csv1_Contig4678:413..1010. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.516e-54
Identity = 103/132 (78.03%), Postives = 111/132 (84.09%), Query Frame = -3
Query:  201 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 596
            R+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP FRPLVEK              AHLKLSELGFA+A
Sbjct:  119 REDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.241e-53
Identity = 103/131 (78.63%), Postives = 108/131 (82.44%), Query Frame = -3
Query:  204 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 596
            R DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DP FRPLVEK              AHLKLSELGFAE
Sbjct:  120 RQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 3.823e-53
Identity = 102/132 (77.27%), Postives = 110/132 (83.33%), Query Frame = -3
Query:  201 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 596
            R+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP F PLVEK              AHLKLSELGFA+A
Sbjct:  119 REDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 204.142 bits (518), Expect = 4.227e-52
Identity = 102/132 (77.27%), Postives = 107/132 (81.06%), Query Frame = -3
Query:  201 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 596
            R+DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D VFRPLVEK              AHLKLSELGFAEA
Sbjct:  119 REDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 3.029e-50
Identity = 98/132 (74.24%), Postives = 106/132 (80.30%), Query Frame = -3
Query:  201 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAEA 596
            R+DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDPVFRPLVEK              AH+KLSELGFA+A
Sbjct:  119 REDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 1.838e-47
Identity = 95/131 (72.52%), Postives = 104/131 (79.39%), Query Frame = -3
Query:  204 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGFAE 596
            R DK EPP EGRLP A +G DHLR VFG +MGL+DKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E+L+GEK+GLLQLP+DKALLDDP+F P VEK              AHLKLSELGFA+
Sbjct:  120 RLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 2.406e-39
Identity = 84/129 (65.12%), Postives = 93/129 (72.09%), Query Frame = -3
Query:  210 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 596
            R D    P+EGRLPDAKQG  HLR VF  +MGLSDKDIVALSGGHTLGR H ERSGF+GPWT+ PL FDNSYF ELL GE +GLL+LP+DK LL+DP FR LVE               +H KLSELGF
Sbjct:  117 RKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 1.724e-37
Identity = 81/129 (62.79%), Postives = 93/129 (72.09%), Query Frame = -3
Query:  210 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 596
            R D +  P+EGRLPDAK+G  HLR +F  +MGLSDKDIVALSGGHTLGR H ERSGFEG WT+ PL FDNSYF ELL GE +GLL+LP+DKALL+DP FR  V+               +H KLSELGF
Sbjct:  117 RRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36
Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = -3
Query:  210 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 596
            R D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE               +H KLSELGF
Sbjct:  118 RRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF835445 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 3.252e-36
Identity = 77/129 (59.69%), Postives = 93/129 (72.09%), Query Frame = -3
Query:  210 RDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXAHLKLSELGF 596
            R D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE               +H KLSELGF
Sbjct:  118 RRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of CF835445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
APX1_ORYSJ4.516e-5478.03L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ2.241e-5378.63L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI3.823e-5377.27L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_PEA4.227e-5277.27L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH3.029e-5074.24L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH1.838e-4772.52L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH2.406e-3965.12L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ1.724e-3762.79Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ3.252e-3659.69Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI3.252e-3659.69Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01D23_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835445 ID=CF835445; Name=CF835445; organism=Citrus sinensis; type=EST; length=598bp
GATATTATTAGTTCAAAGGATGATAGTAACCATAGTCTTCGACCCAACTT
TTCACAATCCACCATGTGCAACAAAACAAAACCACAAAATTCCACCAACA
ACATCTTGAAATTCGAATTTTCTGAGAATTCAAAAAACATAAAATAGAGG
CACACTGTTGTTGGCATCATTCCAACCATTTATTTACTCAGGTAAATTTA
GGCTTCAGCAAATCCTAGCTCAGAGAGCTTGAGATGAGCCTCAGCATAAT
CAGCGAAGAAAGCGTCCTCATCCGCAGCATATTTCTCAACAAGAGGGCGG
AAAACAGGGTCATCCAGAAGGGCCTTGTCGGATGGCAATTGCAGAAGACC
ATCCTTCTCACCAGTCAAGAGCTCCGTGAAGTAGGAATTGTCAAAAATGA
GAGGGTTGCGGGTCCATGGTCCCTCAAATCCAGACCTCTCCTTGTGGCAC
CTTCCCAGGGTGTGGCCACCAGAGAGAGCAACAATATCCTTGTCGCTGAG
GCCCATCTGAGCACCAAAGACTTGCCTCAAGTGATCATTACCCTGTTTAG
CATCAGGAAGCCGGCCTTCTTGAGGTGGCTCAGCCTTGTCATCTCTTC
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