CF835446

Overview
NameCF835446
Unique NameCF835446
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length608
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4678 contig Csv1_Contig4678:412..1019. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 9.518e-55
Identity = 103/133 (77.44%), Postives = 111/133 (83.46%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 399
            GR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP FRPLVEK               HLKLSELGFA+A
Sbjct:  118 GREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.724e-54
Identity = 103/132 (78.03%), Postives = 108/132 (81.82%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 396
            GR DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYFTEL++GEK+GLLQLPSDKAL+ DP FRPLVEK               HLKLSELGFAE
Sbjct:  119 GRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 8.058e-54
Identity = 102/133 (76.69%), Postives = 110/133 (82.71%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 399
            GR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKERSGFEGPWTRNPL FDNSYFTELL+G+K+GLLQLPSDKALL DP F PLVEK               HLKLSELGFA+A
Sbjct:  118 GREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 206.453 bits (524), Expect = 8.909e-53
Identity = 102/133 (76.69%), Postives = 107/133 (80.45%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 399
            GR+DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKERSGFEGPWT NPLIFDNSYFTELLTGEKDGLLQLPSDKALL D VFRPLVEK               HLKLSELGFAEA
Sbjct:  118 GREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 6.384e-51
Identity = 98/133 (73.68%), Postives = 106/133 (79.70%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAEA 399
            GR+DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+RSGFEG WT NPLIFDNSYF ELL+GEK+GLLQL SDKALLDDPVFRPLVEK               H+KLSELGFA+A
Sbjct:  118 GREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 6.607e-48
Identity = 95/132 (71.97%), Postives = 104/132 (78.79%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGFAE 396
            GR DK EPP EGRLP A +G DHLR VFG +MGL+DKDIVALSGGHTLGRCHKERSGFEG WT NPLIFDNSYF E+L+GEK+GLLQLP+DKALLDDP+F P VEK               HLKLSELGFA+
Sbjct:  119 GRLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.276e-40
Identity = 85/130 (65.38%), Postives = 94/130 (72.31%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 390
            GR D +  P+EGRLPDAKQG  HLR VF  +MGLSDKDIVALSGGHTLGR H ERSGF+GPWT+ PL FDNSYF ELL GE +GLL+LP+DK LL+DP FR LVE                H KLSELGF
Sbjct:  116 GRKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 1.631e-38
Identity = 83/130 (63.85%), Postives = 93/130 (71.54%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 390
            GR D S  P+EGRLPDAK+G  HLR +F  +MGLSDKDIVALSGGHTLGR H ERSGFEG WT+ PL FDNSYF ELL GE +GLL+LP+DKALL+DP FR  V+                H KLSELGF
Sbjct:  116 GRRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 79/130 (60.77%), Postives = 93/130 (71.54%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 390
            GR D S+ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF
Sbjct:  117 GRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF835446 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.076e-37
Identity = 79/130 (60.77%), Postives = 93/130 (71.54%), Query Frame = 1
Query:    1 GRDDKSEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKERSGFEGPWTRNPLIFDNSYFTELLTGEKDGLLQLPSDKALLDDPVFRPLVEKXXXXXXXXXXXXXXXHLKLSELGF 390
            GR D S+ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ERSGF+G WT++PL FDNSYF ELL    +GLL+LP+DKAL++DP FR  VE                H KLSELGF
Sbjct:  117 GRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of CF835446 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
APX1_ORYSJ9.518e-5577.44L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ORYSJ4.724e-5478.03L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI8.058e-5476.69L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_PEA8.909e-5376.69L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH6.384e-5173.68L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX2_ARATH6.607e-4871.97L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH2.276e-4065.38L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ1.631e-3863.85Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ3.076e-3760.77Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI3.076e-3760.77Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01D23_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01D23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835446 ID=CF835446; Name=CF835446; organism=Citrus sinensis; type=EST; length=608bp
GGAAGAGATGACAAGTCTGAGCCACCTCAAGAAGGCCGGCTTCCTGATGC
TAAACAGGGTAATGATCACTTGAGGCAAGTCTTTGGTGCTCAGATGGGCC
TCAGCGACAAGGATATTGTTGCTCTCTCTGGTGGCCACACCCTGGGAAGG
TGCCACAAGGAGAGGTCTGGATTTGAGGGACCATGGACCCGCAACCCTCT
CATTTTTGACAATTCCTACTTCACGGAGCTCTTGACTGGTGAGAAGGATG
GTCTTCTGCAATTGCCATCCGACAAGGCCCTTCTGGATGACCCTGTTTTC
CGCCCTCTTGTTGAGAAATATGCTGCGGATGAGGACGCTTTCTTCGCTGA
TTATGCTGAGGCTCATCTCAAGCTCTCTGAGCTAGGATTTGCTGAAGCCT
AAATTTACCTGAGTAAATAAATGGTTGGAATGATGCCAACAACAGTGTGC
CTCTATTTTATGTTTTTTGAATTCTCAGAAAATTCGAATTTCAAGATGTT
GTTGGTGGAATTTTGTGGTTTTGTTTTGTTGCACATGGTGGATTGTGAAA
AGTTGGGTCGAATACTATGGTTACTATCATCCTTTAGAACTAATAATATC
AACTGTTT
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