CF835451

Overview
NameCF835451
Unique NameCF835451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length778
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10948 contig Csv1_Contig10948:613..1390. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: MTDH_FRAAN (Probable mannitol dehydrogenase OS=Fragaria ananassa GN=CAD PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.108e-61
Identity = 122/184 (66.30%), Postives = 138/184 (75.00%), Query Frame = -1
Query:  227 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 778
            PL+YFGL +                             VISTSP K+ EAL+HLGADSFL SRD DQ+Q A+GT+DGIIDTVSA HP+LPL+GLL S GKLV+VGAP+KPLELPV  L+MGRK V+GS  GGMKETQEMIDFAA+HNITADIEVI +DY+NTAMERL KADVRYRFVIDI NTL
Sbjct:  172 PLRYFGLDKPGMHVGVVGLGGLGHVAVKFAKAMGVKVTVISTSPKKEEEALKHLGADSFLVSRDQDQMQAAIGTMDGIIDTVSAQHPLLPLIGLLNSHGKLVMVGAPEKPLELPVFPLLMGRKMVAGSGIGGMKETQEMIDFAARHNITADIEVIPIDYLNTAMERLVKADVRYRFVIDIGNTL 355          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: MTDH_MESCR (Probable mannitol dehydrogenase OS=Mesembryanthemum crystallinum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 229.565 bits (584), Expect = 1.529e-59
Identity = 112/147 (76.19%), Postives = 129/147 (87.76%), Query Frame = -1
Query:  221 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 661
            ISTSP+KK EA+  LGADSF+ SR+P+Q+Q AMGTLDGIIDTVSA HP+LPLLGLLKSQGK+++VG PDKPLELPV  L+ GRK ++GS  GGMKETQEMIDFAAKH+I +DIEV+ MDYVNTAMERL K DVRYRFVID+ANTL A
Sbjct:  214 ISTSPNKKDEAVNRLGADSFVVSREPEQMQSAMGTLDGIIDTVSAAHPLLPLLGLLKSQGKMIMVGVPDKPLELPVFPLLQGRKILAGSCIGGMKETQEMIDFAAKHDIKSDIEVVPMDYVNTAMERLLKGDVRYRFVIDVANTLKA 360          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: MTDH_PETCR (Mannitol dehydrogenase (Fragment) OS=Petroselinum crispum GN=ELI3 PE=2 SV=1)

HSP 1 Score: 221.476 bits (563), Expect = 4.164e-57
Identity = 109/145 (75.17%), Postives = 127/145 (87.59%), Query Frame = -1
Query:  227 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 661
            ISTS SKK EALE LGAD FL S D DQ+Q A GTL GIIDTVSA+HP++PLLGLLK  GKLV+VGAP+KPLELPV  L+MGRK ++GS+ GG+KETQEM+DFAA+HNITAD+EVI +DYVNTAMERL K+DVRYRFVID+ANT+
Sbjct:  190 ISTSESKKQEALEKLGADEFLVSSDSDQMQAATGTLHGIIDTVSALHPVVPLLGLLKVNGKLVMVGAPEKPLELPVFPLLMGRKVLAGSNIGGLKETQEMLDFAAQHNITADVEVIPVDYVNTAMERLVKSDVRYRFVIDVANTI 334          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH7_ARATH (Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis thaliana GN=CAD7 PE=1 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 3.525e-56
Identity = 109/148 (73.65%), Postives = 126/148 (85.14%), Query Frame = -1
Query:  218 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 661
            ISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA HP+LPLLGLLK++GKLV+VGAP +PLELPV  LI GRK V GS  GG+KETQEM+D A KHNITADIE+IS DYVNTAMERLAKADV+YRFVID+ANT+  T
Sbjct:  209 ISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMGTMDGIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKETQEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMKPT 356          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH8_ARATH (Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis thaliana GN=CAD8 PE=1 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.984e-55
Identity = 109/145 (75.17%), Postives = 123/145 (84.83%), Query Frame = -1
Query:  227 ISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 661
            ISTS  K+ EA+  LGAD+FL SRDP Q++ AMGT+DGIIDTVSA H +LPLLGLLK +GKLV+VGAP+KPLELPV+ LI  RK V GS  GG+KETQEMID A KHNITADIE+IS DYVNTAMERL KADVRYRFVID+ANTL
Sbjct:  209 ISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMGTMDGIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKETQEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTL 353          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: GEDH1_OCIBA (Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GEDH1 PE=1 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 4.309e-54
Identity = 108/184 (58.70%), Postives = 131/184 (71.20%), Query Frame = -1
Query:  227 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTL 778
            PLKYFGL +                             VISTS SKK EA++HLG D F+ S DP Q+Q A+GTLDGIIDTVSA HPI+PLL LLK  GKL++VG PDKPL+LPV  LI GR+T++GS  GG+KETQEMIDFAAK+NI AD+EVI +DY+NTAM+RL K+DV+YRFVID+  +L
Sbjct:  174 PLKYFGLDKPGLRVGVNGLGGLGHVAVKFAKAFGTKVTVISTSLSKKEEAMQHLGVDEFVVSTDPQQMQAAVGTLDGIIDTVSAPHPIVPLLSLLKPHGKLIVVGLPDKPLQLPVFPLIQGRRTIAGSGIGGLKETQEMIDFAAKNNIVADVEVIPIDYINTAMDRLLKSDVKYRFVIDVEKSL 357          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH6_ARATH (Probable cinnamyl alcohol dehydrogenase 6 OS=Arabidopsis thaliana GN=CAD6 PE=2 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 6.223e-53
Identity = 108/188 (57.45%), Postives = 133/188 (70.74%), Query Frame = -1
Query:  215 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAATK 778
            P+KYFGL                               V+S++  K  +AL+ LGAD FL S D DQ++ AMGT+DGIIDTVSA H I PL+GLLKS GKLVL+GA +KP ++   SLI+GRK+++GS  GGM+ETQEMIDFAA+H I A+IE+ISMDYVNTAM+RLAK DVRYRFVIDI+NTLAAT+
Sbjct:  175 PMKYFGLTGPDKHVGIVGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMDGIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQETQEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTLAATR 362          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: CADH9_ARATH (Probable cinnamyl alcohol dehydrogenase 9 OS=Arabidopsis thaliana GN=CAD9 PE=1 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 8.127e-53
Identity = 104/185 (56.22%), Postives = 131/185 (70.81%), Query Frame = -1
Query:  224 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLA 778
            P+KY+G+ E                             VIS+S +K  EA+ HLGADSFL + DP +++ A+GT+D IIDT+SAVH + PLLGLLK  GKL+ +G P+KPLELP+  L++GRK V GS  GGMKETQEM+DF AKHNITADIE+I MD +NTAMERLAK+DVRYRFVID+AN+L+
Sbjct:  174 PMKYYGMTEAGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDTISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLDFCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSLS 358          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: MTDH3_STYHU (Probable mannitol dehydrogenase 3 OS=Stylosanthes humilis GN=CAD3 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.061e-52
Identity = 111/188 (59.04%), Postives = 133/188 (70.74%), Query Frame = -1
Query:  218 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSP-SKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAAT 778
            PLKY+GL +                             VISTSP +KK EA+++LGADSFL SRDPDQ++    TLDGIIDTVSA H I+PL+GLLKS GKLVL+GA +KPLELP   LI+GRK V G+  GG+KETQEMIDF+ KHN+  +IEV+ MDYVN AM+RLAKADV+YRFVID+ANTL  T
Sbjct:  175 PLKYYGLDKPGLHVGVVGLGGLGHMVAKFAKTHGLKITVISTSPPTKKEEAIKNLGADSFLVSRDPDQMEAPKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPPFPLILGRKLVGGTLVGGLKETQEMIDFSPKHNVKPEIEVVPMDYVNIAMQRLAKADVKYRFVIDVANTLKPT 362          
BLAST of CF835451 vs. ExPASy Swiss-Prot
Match: MTDH_MEDSA (Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.811e-52
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = -1
Query:  221 PLKYFGLAEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXVISTSPSKKTEALEHLGADSFLNSRDPDQLQGAMGTLDGIIDTVSAVHPILPLLGLLKSQGKLVLVGAPDKPLELPVISLIMGRKTVSGSSTGGMKETQEMIDFAAKHNITADIEVISMDYVNTAMERLAKADVRYRFVIDIANTLAA 778
            P+KY+G+ E                             VISTSP+K+TEA++ LGADSFL S+DP++++ AMGT+D IIDT+SA H ++PLLGLLK  GKLV VG P KPLEL V  L+ GRK + GS+ GGMKETQEM+DF  KHNITADIE+I M  +NTAMERL KADV+YRFVID+AN+ ++
Sbjct:  173 PMKYYGMTEPGKHLGVAGLGGLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIIDTISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEMLDFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSFSS 358          
The following BLAST results are available for this feature:
BLAST of CF835451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
MTDH_FRAAN8.108e-6166.30Probable mannitol dehydrogenase OS=Fragaria ananas... [more]
MTDH_MESCR1.529e-5976.19Probable mannitol dehydrogenase OS=Mesembryanthemu... [more]
MTDH_PETCR4.164e-5775.17Mannitol dehydrogenase (Fragment) OS=Petroselinum ... [more]
CADH7_ARATH3.525e-5673.65Cinnamyl alcohol dehydrogenase 7 OS=Arabidopsis th... [more]
CADH8_ARATH2.984e-5575.17Cinnamyl alcohol dehydrogenase 8 OS=Arabidopsis th... [more]
GEDH1_OCIBA4.309e-5458.70Geraniol dehydrogenase 1 OS=Ocimum basilicum GN=GE... [more]
CADH6_ARATH6.223e-5357.45Probable cinnamyl alcohol dehydrogenase 6 OS=Arabi... [more]
CADH9_ARATH8.127e-5356.22Probable cinnamyl alcohol dehydrogenase 9 OS=Arabi... [more]
MTDH3_STYHU1.061e-5259.04Probable mannitol dehydrogenase 3 OS=Stylosanthes ... [more]
MTDH_MEDSA1.811e-5255.91Probable mannitol dehydrogenase OS=Medicago sativa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E03_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835451 ID=CF835451; Name=CF835451; organism=Citrus sinensis; type=EST; length=778bp
TTTTTTTTTTTATATGAACAATGTTTTATTCCATTAACATTTATAGTTTT
TTGGCAATCACGACATAATTAGGGCGATGTAACTGGAAATTAAAAGTAAT
TTAAGCGCTAAAAGAGTGTAATGATCGAGGGAGCATTACATATAGCCAAG
TGGATCATGGAACAAAGTTGTGAATTGAAGACACCAATCTGATTCTGATT
CTGATTCTTCAAGGTTTGGTGGCGGCCAAGGTGTTTGCAATATCAATGAC
AAATCGATACCGAACATCAGCCTTGGCGAGCCGCTCCATTGCCGTATTGA
CATAATCCATCGAAATAACCTCAATGTCAGCTGTTATATTGTGTTTTGCT
GCAAAATCAATCATCTCTTGCGTCTCTTTCATTCCCCCAGTGCTGCTCCC
TGACACCGTCTTCCTCCCCATAATTAAGGAAATCACAGGTAGCTCGAGTG
GCTTGTCCGGAGCACCAACCAAAACAAGCTTGCCCTGGGACTTTAATAGA
CCGAGCAATGGCAAAATGGGGTGCACAGCGGACACCGTGTCAATAATACC
ATCCAATGTGCCCATGGCACCCTGCAATTGGTCAGGGTCACGGCTATTCA
AAAATGAATCAGCGCCAAGATGTTCAAGAGCTTCAGTCTTCTTGCTTGGA
GAGGTGCTAATTACTGTCACTTTGGCCCCAAAAGCCTTGGCAAATTTGAC
AGCGACATGACCAAGCCCGCCAAGGCCAACGATGCCTACATGCTTTCCTT
GTTCTGCTAGTCCAAAGTATTTCAATGG
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