CF835468

Overview
NameCF835468
Unique NameCF835468
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1217 contig Csv1_Contig1217:213..900. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 292.352 bits (747), Expect = 1.561e-78
Identity = 145/198 (73.23%), Postives = 159/198 (80.30%), Query Frame = -1
Query:  155 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 688
            +TGGPFGTM+   EQ+H+AN GLDIAVRL +P K+Q P +SY D YQLAGVV VEVTGGP++PFHPGR DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKER                    EL++GEK+GLLQLPSDKAL+ DP FRPLVEKYAADEDAFF DYAEAHLKLSELGFAE
Sbjct:   53 RTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 290.041 bits (741), Expect = 7.745e-78
Identity = 145/199 (72.86%), Postives = 156/199 (78.39%), Query Frame = -1
Query:  152 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 688
            KTGGPFGT++   E AH ANNGLDIAVRL EP KEQFP +SY D YQLAGVV VE+TGGP++PFHPGR+DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKER                    ELLTGEKDGLLQLPSDKALL D VFRPLVEKYAADED FF DYAEAHLKLSELGFAEA
Sbjct:   52 KTGGPFGTIKHQAELAHGANNGLDIAVRLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.253e-77
Identity = 143/199 (71.86%), Postives = 159/199 (79.90%), Query Frame = -1
Query:  152 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 688
            +TGGPFGTMR   EQAH AN+G+ IA+RL +P +EQFPTIS+ D +QLAGVV VEVTGGPDIPFHPGR+DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+R                    ELL+GEK+GLLQL SDKALLDDPVFRPLVEKYAADEDAFF DYAEAH+KLSELGFA+A
Sbjct:   52 RTGGPFGTMRFDAEQAHGANSGIHIALRLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.844e-77
Identity = 143/199 (71.86%), Postives = 158/199 (79.40%), Query Frame = -1
Query:  152 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 688
            KTGGPFGTM+   E +H+AN GLDIAVR+ EP KE+ PTISY D YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKER                    ELL+G+K+GLLQLPSDKALL DP FRPLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:   52 KTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.254e-76
Identity = 142/199 (71.36%), Postives = 157/199 (78.89%), Query Frame = -1
Query:  152 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 688
            KTGGPFGTM+   E +H+AN GLDIAVR+ EP KE+ PTISY D YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKER                    ELL+G+K+GLLQLPSDKALL DP F PLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:   52 KTGGPFGTMKTPAELSHAANAGLDIAVRMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 276.559 bits (706), Expect = 8.861e-74
Identity = 140/198 (70.71%), Postives = 154/198 (77.78%), Query Frame = -1
Query:  155 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 688
            KTGGPFGT+R   E AH ANNGLDIAVRL +P KE FP +SY D YQLAGVV VE+TGGP+IPFHPGR DK EPP EGRLP A +G DHLR VFG +MGL+DKDIVALSGGHTLGRCHKER                    E+L+GEK+GLLQLP+DKALLDDP+F P VEKYAADEDAFF DY EAHLKLSELGFA+
Sbjct:   53 KTGGPFGTIRHPQELAHDANNGLDIAVRLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.219e-58
Identity = 123/196 (62.76%), Postives = 136/196 (69.39%), Query Frame = -1
Query:  161 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 688
            KTGGP G++R   E  H AN+GL IA+ L E  K + P I+Y DLYQLAGVV VEVTGGPDI F PGR D    P+EGRLPDAKQG  HLR VF  +MGLSDKDIVALSGGHTLGR H ER                    ELL GE +GLL+LP+DK LL+DP FR LVE YA DEDAFF DYAE+H KLSELGF
Sbjct:   50 KTGGPNGSIRNEEEHTHGANSGLKIALDLCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = -1
Query:  161 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 688
            KTGGP G++R   E +H+AN G+ IA+ L EP K++ P I+Y DLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ER                    ELL    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:   51 KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56
Identity = 115/196 (58.67%), Postives = 138/196 (70.41%), Query Frame = -1
Query:  161 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 688
            KTGGP G++R   E +H+AN G+ IA+ L EP K++ P I+Y DLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ER                    ELL    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:   51 KTGGPNGSIRFPQEYSHAANAGIKIAIDLLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF835468 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.424e-55
Identity = 116/196 (59.18%), Postives = 134/196 (68.37%), Query Frame = -1
Query:  161 KTGGPFGTMRLAVEQAHSANNGLDIAVRLWEPFKEQFPTISYVDLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 688
            KTGG  G++R   E  H +N GL IA+ L EP K + P I+Y DLYQLAGVV VEVTGGP + F PGR D +  P+EGRLPDAK+G  HLR +F  +MGLSDKDIVALSGGHTLGR H ER                    ELL GE +GLL+LP+DKALL+DP FR  V+ YA DED FF DYAE+H KLSELGF
Sbjct:   50 KTGGANGSIRYEEEYTHGSNAGLKIAIDLLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
The following BLAST results are available for this feature:
BLAST of CF835468 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
APX2_ORYSJ1.561e-7873.23L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_PEA7.745e-7872.86L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH2.253e-7771.86L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX1_ORYSJ3.844e-7771.86L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI3.254e-7671.36L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ARATH8.861e-7470.71L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH5.219e-5862.76L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX3_ORYSJ2.864e-5658.67Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI2.864e-5658.67Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX4_ORYSJ2.424e-5559.18Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E12_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835468 ID=CF835468; Name=CF835468; organism=Citrus sinensis; type=EST; length=688bp
ATTTCCTAAACACCCTGTGCAATAAAACAAAACCACAAAATTCAACCAAC
AACATCTTGAAATTCGAATTTTCTGACAATTCAAAAAACATAAAATAGAG
GCACACTGTTGTTGGCATCATTCCAACCATTTATTTACTCAGGTAACTTT
AGGCTTCGGCAAATCCTAGCTCAGAGAGCTTGAGATGAGCCTCAGCATAA
TCAGTGAAGAAAGCGTCCTCATCCGCAGCATATTTCTCAACAAGAGGGCG
GAAAACAGGGTCATCCAGAAGGGCCTTGTCAGATGGCAATTGCAAAAGAC
CATCCTTCTCACCAGTCAAGAGCTCCCTCTCCTTGTGGCACCTTCCCAGG
GTGTGGCCACCAGAGAGAGCAACAATATCCTTGTCGCTGAGGCCCATCTG
AGCACCGAAGACTTGCCTCAAGTGATCATTACCCTGTTTAGCATCAGGAA
GCCGGCCTTCTTGAGGTGGCTCAGCCTTGTCATCTCTTCCAGGGTGGAAG
GGGATATCGGGCCCACCGGTAACCTCAACGCCAACAACACCAGCAAGCTG
ATAAAGGTCAACGTACGAGATGGTAGGGAACTGCTCCTTGAACGGCTCCC
AAAGCCTAACGGCAATATCGAGGCCGTTGTTGGCTGAGTGTGCCTGCTCA
ACAGCGAGCCTCATGGTTCCGAACGGACCTCCGGTCTT
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