CF835475

Overview
NameCF835475
Unique NameCF835475
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5523 contig Csv1_Contig5523:40..794. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_DROME (Putative oligosaccharyltransferase complex subunit CG9662 OS=Drosophila melanogaster GN=CG9662 PE=2 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 5.799e-24
Identity = 54/141 (38.30%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  195 PYSIIRPPRLRLKLPSFTLPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYLR 617
            P+ I+ PP ++++  S  +PSPM VF+++L +YF+V  G +YDVIVEPP +G+T D   G  RPV F+P RVNGQYI+EGL+S             +D      +    ++   + G   I++++  + LF+R+K+P YL+
Sbjct:    9 PFHILVPPNIKVRRFSIPMPSPMAVFSVILFSYFLVTGGIIYDVIVEPPSLGATVD-EHGHSRPVAFMPYRVNGQYIMEGLASSFLFTVGGLGFIIMDQTHTPGKTNLNRLLLTAMGFIFILVSFFTTWLFMRMKLPSYLQ 148          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_DANRE (Oligosaccharyltransferase complex subunit ostc OS=Danio rerio GN=ostc PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24
Identity = 58/141 (41.13%), Postives = 89/141 (63.12%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P++++  P ++LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G  S+++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNVKLKKPSWLHMPSAMTVYAVVIVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVSVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_CHICK (Oligosaccharyltransferase complex subunit OSTC OS=Gallus gallus GN=OSTC PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 7.573e-24
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P++++  P ++LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G  S+++++ M+ +F+R+K+PGYL
Sbjct:    8 PFAVLECPNIKLKRPGWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVSVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTCA_XENLA (Oligosaccharyltransferase complex subunit ostc-A OS=Xenopus laevis GN=ostc-A PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 9.891e-24
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNTPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_XENTR (Oligosaccharyltransferase complex subunit ostc OS=Xenopus tropicalis GN=ostc PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTCB_XENLA (Oligosaccharyltransferase complex subunit ostc-B OS=Xenopus laevis GN=ostc-B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.292e-23
Identity = 58/141 (41.13%), Postives = 88/141 (62.41%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P++++  P L+LK PS+  +PS MTV+A+V+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFTVLECPNLKLKKPSWLHMPSAMTVYAMVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_BOVIN (Oligosaccharyltransferase complex subunit OSTC OS=Bos taurus GN=OSTC PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.759e-23
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSVTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_RAT (Oligosaccharyltransferase complex subunit OSTC OS=Rattus norvegicus GN=Ostc PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_MOUSE (Oligosaccharyltransferase complex subunit OSTC OS=Mus musculus GN=Ostc PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
BLAST of CF835475 vs. ExPASy Swiss-Prot
Match: OSTC_CANFA (Oligosaccharyltransferase complex subunit OSTC OS=Canis familiaris GN=OSTC PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.909e-23
Identity = 58/141 (41.13%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  198 PYSIIRPPRLRLKLPSFT-LPSPMTVFALVLLTYFMVVSGFVYDVIVEPPGIGSTQDPATGSVRPVVFLPGRVNGQYIIEGLSSXXXXXXXXXXXXXLDLALDKNRAKSVKVSYASAGISSIVIAYIMSMLFIRIKIPGYL 617
            P+ ++  P L+LK P +  +PS MTV+ALV+++YF++  G +YDVIVEPP +GS  D   G  RPV FL  RVNGQYI+EGL+S             LD +   N  K  +      G   +++++ M+ +F+R+K+PGYL
Sbjct:    8 PFLVLECPNLKLKKPPWVHMPSAMTVYALVVVSYFLITGGIIYDVIVEPPSVGSMTD-EHGHQRPVAFLAYRVNGQYIMEGLASSFLFTMGGLGFIILDRSNAPNIPKLNRFLLLFIGFVCVLLSFFMARVFMRMKLPGYL 147          
The following BLAST results are available for this feature:
BLAST of CF835475 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
OSTC_DROME5.799e-2438.30Putative oligosaccharyltransferase complex subunit... [more]
OSTC_DANRE7.573e-2441.13Oligosaccharyltransferase complex subunit ostc OS=... [more]
OSTC_CHICK7.573e-2441.13Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTCA_XENLA9.891e-2441.13Oligosaccharyltransferase complex subunit ostc-A O... [more]
OSTC_XENTR1.292e-2341.13Oligosaccharyltransferase complex subunit ostc OS=... [more]
OSTCB_XENLA1.292e-2341.13Oligosaccharyltransferase complex subunit ostc-B O... [more]
OSTC_BOVIN3.759e-2341.13Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_RAT4.909e-2341.13Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_MOUSE4.909e-2341.13Oligosaccharyltransferase complex subunit OSTC OS=... [more]
OSTC_CANFA4.909e-2341.13Oligosaccharyltransferase complex subunit OSTC OS=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01E19_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01E19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835475 ID=CF835475; Name=CF835475; organism=Citrus sinensis; type=EST; length=755bp
TTTTTTTTTTTTTATCTTAATCACTTAGAATTCGCAAAATCTCATTATCT
TAATCACTTGGAATTCATAAGCAGTTCATTCATTGCAAATGTATAACACA
ATCTGATCAAATACCATAAAAAAATCCACAACCCAATTAAACTCTTATCA
AAACTAAGTTAACGAACAGCATTAAAAAAGAAAATAAAAATTCACCTAAG
ATAACCAGGGATCTTAATGCGAATAAAGAGCATACTCATAATATAAGCAA
TGACAATGGAAGAGATCCCAGCAGAGGCATAAGAGACCTTAACACTCTTA
GCCCTATTCTTATCAAGAGCGAGATCCAAAAGCACGAAGCCCATCCCGCC
GAGCACGAACATGAACCCAGAAGAGAGTCCCTCGATGATGTACTGCCCGT
TGACGCGGCCGGGTAGGAAGACGACGGGGCGTACGGAACCGGTGGCGGGG
TCCTGCGTGGACCCGATGCCAGGAGGCTCAACGATGACGTCGTAGACGAA
GCCCGACACGACCATAAAGTAGGTTAGGAGGACGAGGGCGAAGACGGTCA
TTGGGGATGGGAGCGTGAATGACGGCAGCTTCAGGCGGAGACGCGGCGGG
CGGATGATCGAGTAAGGGAAGATTTTGAGGATGTGGAACAGTGGGTCAAT
TGACGACTGCGATGCGTCGGATTGTGATGCGAGGGTTTGTGCTGCTTCTG
CTTTCGGAGCCATTTTTGCAGAAGTATGTGAATCGTCCTGAATTGGATCA
GAGTC
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