CF835486

Overview
NameCF835486
Unique NameCF835486
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3636 contig Csv1_Contig3636:199..824. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: FHIT_DICDI (Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium discoideum GN=fhit PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.316e-35
Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = -1
Query:  207 EVFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 626
            E+F++T LS+A+VNL+P+L GHVLVC +R   R  DLT +E TDLWL+AQ++   +E +  G   TFAIQDG  AGQTV HVHIH++PRK  DFE ND+IY+ IE             KER+ RS EEM +E+ + R LF
Sbjct:   15 EIFFTTELSFALVNLKPVLPGHVLVCPKRIVPRVKDLTKEEFTDLWLSAQRISSVVEEHFNGDGITFAIQDGKNAGQTVEHVHIHIIPRKKFDFENNDQIYNEIE-------------KEREPRSYEEMEKESSELRPLF 141          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: FHIT_BOVIN (Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=FHIT PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 7.450e-34
Identity = 72/139 (51.80%), Postives = 95/139 (68.35%), Query Frame = -1
Query:  207 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 623
            VF  T LS+A+VN +P++ GHVLVC  R  +RF D++ +E  DL+  AQ+VG  +E + +G+S TF++QDGPEAGQTV HVH+H+LPRKAGDF +ND IYDA+E  ++E     D D     RS EEM  EA   R  F
Sbjct:   15 VFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDMSPEEVADLFQAAQRVGTVVEKHFQGTSLTFSMQDGPEAGQTVKHVHVHILPRKAGDFHRNDSIYDALEKHDRE-----DKDSPALWRSEEEMAAEAAALRVYF 148          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: FHIT_HUMAN (Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN=FHIT PE=1 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.397e-32
Identity = 72/139 (51.80%), Postives = 91/139 (65.47%), Query Frame = -1
Query:  207 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 623
            VF  T LS+A+VN +P++ GHVLVC  R  +RF DL  DE  DL+ T Q+VG  +E +  G+S TF++QDGPEAGQTV HVH+HVLPRKAGDF +ND IY+ ++  +KE       D     RS EEM  EA   R  F
Sbjct:   15 VFLKTELSFALVNRKPVVPGHVLVCPLRPVERFHDLRPDEVADLFQTTQRVGTVVEKHFHGTSLTFSMQDGPEAGQTVKHVHVHVLPRKAGDFHRNDSIYEELQKHDKE-------DFPASWRSEEEMAAEAAALRVYF 146          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: FHIT_RAT (Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegicus GN=Fhit PE=1 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 3.130e-32
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = -1
Query:  207 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 623
            VF  T LS+A+VN +P++ GHVL+C  R  +RF DL  DE  DL+   Q+VG  +E + +G+S TF++QDGPEAGQTV HVH+H+LPRK+GDF +ND IYD ++  ++E     + D     RS EEM  EA+  R+ F
Sbjct:   15 VFLKTELSFALVNRKPVVPGHVLMCPLRPVERFRDLRPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHILPRKSGDFRRNDNIYDELQKHDRE-----EEDSPAFWRSEEEMAAEAEVLRAYF 148          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: FHIT_MOUSE (Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN=Fhit PE=2 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 4.088e-32
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = -1
Query:  207 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSLF 623
            VF  T LS+A+VN +P++ GHVLVC  R  +RF DL  DE  DL+   Q+VG  +E + +G+S TF++QDGPEAGQTV HVH+HVLPRKAGDF +ND IYD ++  ++E     + D     RS +EM  EA+  R  F
Sbjct:   15 VFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDLHPDEVADLFQVTQRVGTVVEKHFQGTSITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKHDRE-----EEDSPAFWRSEKEMAAEAEALRVYF 148          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: NFT1_CAEEL (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Caenorhabditis elegans GN=nft-1 PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.339e-32
Identity = 72/138 (52.17%), Postives = 91/138 (65.94%), Query Frame = -1
Query:  210 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYRSL 623
            +FYSTP S+  VNL+P+  GHVLV  +R   R  DLT  ET DL++ A+KV   LE +H  +STT  +QDG +AGQTVPHVHIH+LPR+AGDF  N EIY  +   +KE         ERK RS E+M +EA  YR+L
Sbjct:  311 IFYSTPHSFVFVNLKPVTDGHVLVSPKRVVPRLTDLTDAETADLFIVAKKVQAMLEKHHNVTSTTICVQDGKDAGQTVPHVHIHILPRRAGDFGDN-EIYQKLASHDKE--------PERKPRSNEQMAEEAVVYRNL 439          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: APH1_SCHPO (Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] OS=Schizosaccharomyces pombe GN=aph1 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 5.525e-29
Identity = 67/161 (41.61%), Postives = 92/161 (57.14%), Query Frame = -1
Query:  207 EVFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKEL---------------------QQKLDLDKERKDRSLEEMNQEADQYRSLF 626
            +VFY T LS A VNL+P+L GHVLV  +R   R  DLT  E TDL+ + +KV + +E     S++   IQDG +AGQTVPHVH+H++PRK  DF +ND +Y  +E  E  L                     +Q +  D++RK R+LEEM +EA   +  F
Sbjct:   15 QVFYRTKLSAAFVNLKPILPGHVLVIPQRAVPRLKDLTPSELTDLFTSVRKVQQVIEKVFSASASNIGIQDGVDAGQTVPHVHVHIIPRKKADFSENDLVYSELEKNEGNLASLYLTGNERYAGDERPPTSMRQAIPKDEDRKPRTLEEMEKEAQWLKGYF 175          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: NFT1_DROME (Nitrilase and fragile histidine triad fusion protein NitFhit OS=Drosophila melanogaster GN=NitFhit PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.486e-21
Identity = 52/136 (38.24%), Postives = 79/136 (58.09%), Query Frame = -1
Query:  216 VFYSTPLSYAMVNLRPLLSGHVLVCSRREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIEVKEKELQQKLDLDKERKDRSLEEMNQEADQYR 623
            +FY +   +A  NLR ++ GHVLV ++R   R   L   E  D++ T   V + LE  ++ +S T  +QDG +AGQTVPHVH H++PR+ GDF  ND+IY  ++ +           +E+  R++EE  +EA  YR
Sbjct:  328 IFYESEHCFAFTNLRCVVKGHVLVSTKRVTPRLCGLDCAEMADMFTTVCLVQRLLEKIYQTTSATVTVQDGAQAGQTVPHVHFHIMPRRLGDFGHNDQIYVKLDERA----------EEKPPRTIEERIEEAQIYR 453          
BLAST of CF835486 vs. ExPASy Swiss-Prot
Match: HNT2_YEAST (Hit family protein 2 OS=Saccharomyces cerevisiae GN=HNT2 PE=1 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.081e-16
Identity = 44/106 (41.51%), Postives = 67/106 (63.21%), Query Frame = -1
Query:  312 EVFYSTPLSYAMVNLRPLLSGHVLVCS-RREAKRFADLTGDETTDLWLTAQKVGKQLESYHKGSSTTFAIQDGPEAGQTVPHVHIHVLPRKAGDFEKNDEIYDAIE 626
            +VFY +  +YA+VNL+P++ GHVL+   R      +DLT  E+ D + T Q + + ++  +K  S   AIQDGPEAGQ+VPH+H H++PR   +    D IYD ++
Sbjct:   15 QVFYKSKYTYALVNLKPIVPGHVLIVPLRTTVLNLSDLTMPESQDYFKTLQLIHRFIKWQYKADSINVAIQDGPEAGQSVPHLHTHIIPRYKIN-NVGDLIYDKLD 119          
The following BLAST results are available for this feature:
BLAST of CF835486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
FHIT_DICDI2.316e-3552.14Bis(5'-adenosyl)-triphosphatase OS=Dictyostelium d... [more]
FHIT_BOVIN7.450e-3451.80Bis(5'-adenosyl)-triphosphatase OS=Bos taurus GN=F... [more]
FHIT_HUMAN2.397e-3251.80Bis(5'-adenosyl)-triphosphatase OS=Homo sapiens GN... [more]
FHIT_RAT3.130e-3248.92Bis(5'-adenosyl)-triphosphatase OS=Rattus norvegic... [more]
FHIT_MOUSE4.088e-3250.36Bis(5'-adenosyl)-triphosphatase OS=Mus musculus GN... [more]
NFT1_CAEEL5.339e-3252.17Nitrilase and fragile histidine triad fusion prote... [more]
APH1_SCHPO5.525e-2941.61Bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] ... [more]
NFT1_DROME2.486e-2138.24Nitrilase and fragile histidine triad fusion prote... [more]
HNT2_YEAST1.081e-1641.51Hit family protein 2 OS=Saccharomyces cerevisiae G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01F01_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835486 ID=CF835486; Name=CF835486; organism=Citrus sinensis; type=EST; length=626bp
AATTCCAGAATTCAACAAGTGATGAGGATGGGCGAAGGATTATTCTGTAT
CTGAGATATGATGTATAATAATTGTATGAAAGCCCAATGTTTTTAGAAAC
ACTAATAAAATTTCATGAAGTATTTTATTTAGAGGCCTGAAGTTTCTGGC
AGCTTTGGCGAACGTTCAAGAGAAGCCTAATGAAAGGCACTGCTAAATTT
TCACAGGAAAAGCGACCTGTATTGATCAGCCTCTTGATTCATCTCCTCGA
GGCTTCTGTCCTTCCTTTCCTTATCCAAATCAAGCTTCTGCTGTAATTCC
TTCTCCTTCACCTCTATTGCATCATAAATCTCATCATTTTTTTCAAAGTC
ACCAGCTTTGCGCGGGAGAACATGGATGTGAACATGGGGTACTGTCTGTC
CAGCTTCAGGCCCATCTTGGATGGCAAATGTTGTTGATGAACCCTTGTGG
TAGCTTTCGAGCTGTTTGCCAACCTTTTGGGCTGTGAGCCATAAATCAGT
AGTCTCATCACCTGTAAGATCAGCAAAGCGCTTTGCTTCACGCCTCGAGC
AGACAAGTACATGACCAGAAAGCAACGGGCGCAGGTTGACCATGGCGTAT
GAGAGAGGAGTGCTATAAAACACTTC
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