CF835492

Overview
NameCF835492
Unique NameCF835492
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length754
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:9..762. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 385.571 bits (989), Expect = 1.593e-106
Identity = 179/210 (85.24%), Postives = 198/210 (94.29%), Query Frame = 2
Query:  125 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDAI 754
            E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKE DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVLE+F +IGID PGLVALLGSHSVGRTHCVKLVHRLYPEVDP+LNPDHVPHMLHKCPD+I
Sbjct:   26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEHDRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVLEKFKSIGIDTPGLVALLGSHSVGRTHCVKLVHRLYPEVDPSLNPDHVPHMLHKCPDSI 235          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.458e-67
Identity = 120/203 (59.11%), Postives = 156/203 (76.85%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCP 745
            L MN+YK++CP+AE+IIR+QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++  RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+S V+  F +IGID    VALLG+HSVGR HCV LVHRLYP +DP L+P +  ++  +CP
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKSKRSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVISTFNSIGIDVEATVALLGAHSVGRVHCVNLVHRLYPTIDPTLDPSYALYLKKRCP 232          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.163e-40
Identity = 80/207 (38.65%), Postives = 128/207 (61.84%), Query Frame = 2
Query:  149 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCPDAI 754
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+   +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L+RF+  G +    V+L G+HS+G THC    +RLY      + DP LNP  +  +  KCP ++
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVILQRFSFRGFNERETVSLFGAHSIGITHCTFFKNRLYNFSATGKPDPELNPGFLQELKTKCPFSV 277          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER64_ARATH (Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.921e-35
Identity = 82/204 (40.20%), Postives = 114/204 (55.88%), Query Frame = 2
Query:  149 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            ++Y  TCPQA+ I+   VK      +    + LR  FHDC V+ CD S+LLDS  K  +EK+   +  +  F  I+N K+A+E +CPG+VSCADIL L+ RD V   GGP   +  GR+DGR S+A I  + LP    ++S + + F   G+    LVAL G H++G  HC    +RL+      EVDP LNP     +   CP
Sbjct:   26 HYYDHTCPQADHIVTNAVKKAMSNDQTVPAALLRMHFHDCFVRGCDGSVLLDSKGKNKAEKDGPPNISLHAFYVIDNAKKALEEQCPGIVSCADILSLAARDAVALSGGPTWAVPKGRKDGRISKA-IETRQLPAPTFNISQLRQNFGQRGLSMHDLVALSGGHTLGFAHCSSFQNRLHKFNTQKEVDPTLNPSFAARLEGVCP 228          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 3.277e-35
Identity = 75/204 (36.76%), Postives = 115/204 (56.37%), Query Frame = 2
Query:  152 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK-EMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPE-----VDPALNPDHVPHMLHKCP 745
            FY +TCP+AE I+R ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK  +     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P    + + +++ F    +    +VAL GSHS+G+  C  ++ RLY +      DPAL P +   +   CP
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEKLSLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMPSPRANATFLIDLFERFNLSVKDMVALSGSHSIGQGRCFSIMFRLYNQSGSGKPDPALEPSYRKKLDKLCP 230          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 80/215 (37.21%), Postives = 124/215 (57.67%), Query Frame = 2
Query:  125 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMD--RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRL-----YPEVDPALNPDHVPHMLHKCPD 748
            E +  L  N+Y  TCP  E I+++ V   +K+   TA + LR  FHDC V+ CDAS+ + S  +  +EK+ D  +S     F  +   K AVE +CPGVVSCADIL L+ RD VV +GGP   ++ GRRDG  S+A  +   LP+    +  +++ FA+ G+    ++AL G+H++G +HC +  +RL     +  VDP ++P +   ++  C D
Sbjct:   27 ESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENED-AEKDADDNKSLAGDGFDTVIKAKTAVESQCPGVVSCADILALAARDVVVLVGGPEFKVELGRRDGLVSKASRVTGKLPEPGLDVRGLVQIFASNGLSLTDMIALSGAHTIGSSHCNRFANRLHNFSTFMPVDPTMDPVYAQQLIQACSD 240          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.301e-35
Identity = 69/198 (34.85%), Postives = 115/198 (58.08%), Query Frame = 2
Query:  128 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFG-MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYP--EVDPALNP 712
            +D  L +++YK TCP   D+I+++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+   +   ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++ +F + G+    +VAL+G+H++G+  C     R+Y   +V  ALNP
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKKASPNINSLKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISIIAKFYSQGLSVEDMVALIGAHTIGKAQCRNFRSRIYGDFQVTSALNP 223          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.536e-35
Identity = 78/207 (37.68%), Postives = 119/207 (57.49%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKC 742
            GL + FY   CP+AE I+++ V    K  +  A   LR  FHDC V+ C+ S+LL+   K   EK    +  +R F  I+N+K A+E+ECPG+VSC+D+L L  RD +VAL GP   ++TGRRDG  +        LP   +++S ++ +F + G+D   LV L G H++G  HC ++ +RLY      + DP L+ ++   +  KC
Sbjct:   31 GLKVGFYDKACPKAELIVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKK-DEKNSIPNLTLRGFEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKC 236          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.245e-34
Identity = 83/208 (39.90%), Postives = 116/208 (55.77%), Query Frame = 2
Query:  137 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLY-----PEVDPALNPDHVPHMLHKCP 745
            G  + FY  TCP+AE I+R  V+         A   LR  FHDC VQ CD S+L+       +EK    + G+R +  I++ K  +E  CPGVVSCADIL L+ RD VV  GG    + TGRRDGR S+A  +   LP  +DS+ V  ++FAA G++   LV L+G H++G + C    +RL+        DPA++P  V ++   CP
Sbjct:   31 GTRVGFYSRTCPRAESIVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPA---TEKTAFANLGLRGYEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDVSN-LPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQALCP 234          
BLAST of CF835492 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.124e-34
Identity = 79/205 (38.54%), Postives = 106/205 (51.71%), Query Frame = 2
Query:  140 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEM-DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVLERFAAIGIDAPGLVALLGSHSVGRTHCVKLVHRLYPEVDPALNPDHVPHMLHKCPDA 751
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+         R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++  F+A+G+    +VAL G+H++G++ C     R+Y E +  +N          CP A
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCTNFRARIYNETN--INAAFATTRQRTCPRA 232          
The following BLAST results are available for this feature:
BLAST of CF835492 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 108
Match NameE-valueIdentityDescription
PER42_ARATH1.593e-10685.24Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.458e-6759.11Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH1.163e-4038.65Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER64_ARATH1.921e-3540.20Peroxidase 64 OS=Arabidopsis thaliana GN=PER64 PE=... [more]
PER17_ARATH3.277e-3536.76Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER55_ARATH7.301e-3537.21Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER11_ARATH7.301e-3534.85Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER56_ARATH9.536e-3537.68Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER2_ARAHY1.245e-3439.90Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]
PER52_ARATH2.124e-3438.54Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01F08_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01F08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835492 ID=CF835492; Name=CF835492; organism=Citrus sinensis; type=EST; length=754bp
CCGTAGGTTGGTCACCTTTAGTGAGTGAAGAGTAGAAGAGAAAATGGGTA
CGAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCAGCTGTGTCT
CTGAGGTCTGCTTTGGCAGAAAATGAAGAGGACCCAGGTCTTGTTATGAA
TTTTTACAAGGATACATGCCCTCAGGCCGAGGACATTATCAGGGAACAAG
TTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCTTGGCTTAGA
AACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTCACTGCTTCT
GGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGATGGACAGGAGCTTTG
GTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGCTGTTGAAAGA
GAGTGCCCTGGTGTTGTTTCCTGTGCTGATATCCTTGTCCTGTCCGGTAG
AGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTCAAGACAGGAA
GAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCAGTATCTCCCA
GATCACAATGACAGCATGTCTGTTGTTCTTGAGAGGTTTGCAGCCATTGG
CATTGACGCCCCTGGACTTGTTGCTCTGCTAGGATCTCACAGTGTTGGCA
GAACTCATTGTGTGAAGCTGGTGCACCGTCTGTACCCAGAAGTTGACCCT
GCACTGAACCCTGACCATGTTCCGCATATGCTCCATAAGTGTCCTGATGC
AATC
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