CF835542

Overview
NameCF835542
Unique NameCF835542
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length490
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC29_ARATH (NAC domain-containing protein 29 OS=Arabidopsis thaliana GN=NAC029 PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 1.134e-58
Identity = 109/165 (66.06%), Postives = 128/165 (77.58%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQL---RKTGGYVEHANASDEQKLMV 486
            EVDIYKFDPWQLPEK EFGE EWYFFSPR+RKYPNG RPNRA VSGYWKATGTDKAI+ GS  +GVKKALVFYKGRPPKGIKTDWIMHEYRL+D  +   K NGSM+LD+WVLCRIYKKR  G+  +L+    E +  +D++    +T   V  A    E+++M+
Sbjct:   43 EVDIYKFDPWQLPEKTEFGENEWYFFSPRERKYPNGVRPNRAAVSGYWKATGTDKAIHSGSSNVGVKKALVFYKGRPPKGIKTDWIMHEYRLHDSRKASTKRNGSMRLDEWVLCRIYKKR--GASKLLN----EQEGFMDEVLMEDETKVVVNEAERRTEEEIMM 201          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC19_ARATH (NAC domain-containing protein 19 OS=Arabidopsis thaliana GN=NAC019 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 9.623e-50
Identity = 89/129 (68.99%), Postives = 103/129 (79.84%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 387
            E+D+YKFDPW LP KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  + V D
Sbjct:   48 EIDLYKFDPWVLPNKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISTEGQRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQSSAQKQVYD 172          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC18_ARATH (NAC domain-containing protein 18 OS=Arabidopsis thaliana GN=NAC018 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 3.657e-49
Identity = 93/134 (69.40%), Postives = 104/134 (77.61%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIY----GGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLND--PTR--QPYKHNGSMKLDDWVLCRIYKK-RQTGSR 375
            +VD+YKFDPW+LP KA FGE+EWYFFSPRDRKYPNG RPNRA  SGYWKATGTDK +     GGSK +GVKKALVFY G+PPKG+K+DWIMHEYRL D  PT          S++LDDWVLCRIYKK   T SR
Sbjct:   51 DVDLYKFDPWELPAKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYSGKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYKKNNSTASR 184          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC55_ARATH (NAC domain-containing protein 55 OS=Arabidopsis thaliana GN=NAC055 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 8.146e-49
Identity = 87/125 (69.60%), Postives = 101/125 (80.80%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 375
            E+D+YKFDPW LP KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL +P+R+    NGS KLDDWVLCRIYKK+ +  +
Sbjct:   48 EIDLYKFDPWVLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFYIGKAPKGTKTNWIMHEYRLIEPSRR----NGSTKLDDWVLCRIYKKQTSAQK 168          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC72_ARATH (NAC domain-containing protein 72 OS=Arabidopsis thaliana GN=NAC072 PE=2 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 1.176e-47
Identity = 90/157 (57.32%), Postives = 108/157 (68.79%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLDAKVEEDQSCVDQLRKTGGYVEHANASDE 471
            ++D+YKFDPW LP KA FGEKEWYFFSPRDRKYPNG+RPNR   SGYWKATGTDK I    + +G+KKALVFY G+ PKG KT+WIMHEYRL + +R     +GS KLDDWVLCRIYKK     R      V   Q+C ++    G     ++  D+
Sbjct:   48 DIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITADGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRLIEHSRS----HGSSKLDDWVLCRIYKKTSGSQRQA----VTPVQACREEHSTNGSSSSSSSQLDD 196          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC68_ORYSJ (NAC domain-containing protein 68 OS=Oryza sativa subsp. japonica GN=NAC68 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 2.620e-47
Identity = 83/131 (63.36%), Postives = 99/131 (75.57%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAI--YGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSRSVLD 387
            EVD+YK DPW LPEKA FG KEWYFF+PRDRKYPNG+RPNRA   GYWKATG DK +   G ++ +G+KKALVFY G+ P+G+KTDWIMHEYRL D  R P    GS KLD+WVLCR+Y K+    +  L+
Sbjct:   55 EVDLYKLDPWDLPEKALFGRKEWYFFTPRDRKYPNGSRPNRAAGRGYWKATGADKPVAPKGSARTVGIKKALVFYSGKAPRGVKTDWIMHEYRLADADRAPGGKKGSQKLDEWVLCRLYNKKNNWEKVKLE 185          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC48_ORYSJ (NAC domain-containing protein 48 OS=Oryza sativa subsp. japonica GN=NAC48 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 6.454e-46
Identity = 84/120 (70.00%), Postives = 96/120 (80.00%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKR 360
            E+D+YKFDPWQLP  A +GEKEWYFFSPRDRKYPNG+RPNRA  SGYWKATG DK + G  K + +KKALVFY G+ PKG KT+WIMHEYRL D  R   K N S++LDDWVLCRIY K+
Sbjct:   43 EIDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPV-GSPKPVAIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSARKKN-SLRLDDWVLCRIYNKK 160          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC2_ARATH (NAC domain-containing protein 2 OS=Arabidopsis thaliana GN=NAC002 PE=2 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 1.438e-45
Identity = 83/125 (66.40%), Postives = 97/125 (77.60%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKHNGSMKLDDWVLCRIYKKRQTGSR 375
            E+D+YK+DPW+LP  A +GEKEWYFFSPRDRKYPNG+RPNR+  SGYWKATG DK I G  K +G+KKALVFY G+ PKG KT+WIMHEYRL D  R   K   S++LDDWVLCRIY K+    R
Sbjct:   41 EIDLYKYDPWELPGLALYGEKEWYFFSPRDRKYPNGSRPNRSAGSGYWKATGADKPI-GLPKPVGIKKALVFYAGKAPKGEKTNWIMHEYRLADVDRSVRKKKNSLRLDDWVLCRIYNKKGATER 164          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NA102_ARATH (NAC domain-containing protein 102 OS=Arabidopsis thaliana GN=NAC102 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 2.712e-44
Identity = 82/123 (66.67%), Postives = 98/123 (79.67%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTRQPYKH-NGSMKLDDWVLCRIYKKRQT 366
            E+D+YKF+PW+LPE A +GEKEWYFFS RDRKYPNG+RPNRA  +GYWKATG DK I G  K LG+KKALVFY G+ PKGIKT+WIMHEYRL +  R    +   +++LDDWVLCRIY K+ T
Sbjct:   84 EIDLYKFNPWELPEMALYGEKEWYFFSHRDRKYPNGSRPNRAAGTGYWKATGADKPI-GKPKTLGIKKALVFYAGKAPKGIKTNWIMHEYRLANVDRSASTNKKNNLRLDDWVLCRIYNKKGT 205          
BLAST of CF835542 vs. ExPASy Swiss-Prot
Match: NAC71_ORYSJ (NAC domain-containing protein 71 OS=Oryza sativa subsp. japonica GN=NAC71 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 4.626e-44
Identity = 82/127 (64.57%), Postives = 97/127 (76.38%), Query Frame = 1
Query:    1 EVDIYKFDPWQLPEKAEFGEKEWYFFSPRDRKYPNGTRPNRATVSGYWKATGTDKAIYGGSKYLGVKKALVFYKGRPPKGIKTDWIMHEYRLNDPTR-------QPYKHNGSMKLDDWVLCRIYKKR 360
            EVD+YKF+PW LPE+A  GEKEWYFFSPRDRKYPNG RPNRA  +GYWKATG DK + G  + + +KKALVFY G+PPKG+KT+WIMHEYRL D  R           HN +++LDDWVLCRIY K+
Sbjct:   43 EVDLYKFNPWDLPERAMGGEKEWYFFSPRDRKYPNGQRPNRAAGTGYWKATGADKPV-GSPRAVAIKKALVFYAGKPPKGVKTNWIMHEYRLADVDRSAAARKLSKSSHN-ALRLDDWVLCRIYNKK 167          
The following BLAST results are available for this feature:
BLAST of CF835542 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
NAC29_ARATH1.134e-5866.06NAC domain-containing protein 29 OS=Arabidopsis th... [more]
NAC19_ARATH9.623e-5068.99NAC domain-containing protein 19 OS=Arabidopsis th... [more]
NAC18_ARATH3.657e-4969.40NAC domain-containing protein 18 OS=Arabidopsis th... [more]
NAC55_ARATH8.146e-4969.60NAC domain-containing protein 55 OS=Arabidopsis th... [more]
NAC72_ARATH1.176e-4757.32NAC domain-containing protein 72 OS=Arabidopsis th... [more]
NAC68_ORYSJ2.620e-4763.36NAC domain-containing protein 68 OS=Oryza sativa s... [more]
NAC48_ORYSJ6.454e-4670.00NAC domain-containing protein 48 OS=Oryza sativa s... [more]
NAC2_ARATH1.438e-4566.40NAC domain-containing protein 2 OS=Arabidopsis tha... [more]
NA102_ARATH2.712e-4466.67NAC domain-containing protein 102 OS=Arabidopsis t... [more]
NAC71_ORYSJ4.626e-4464.57NAC domain-containing protein 71 OS=Oryza sativa s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01H01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01H01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835542 ID=CF835542; Name=CF835542; organism=Citrus sinensis; type=EST; length=490bp
GAAGTGGATATTTACAAGTTTGACCCCTGGCAACTTCCTGAGAAAGCTGA
ATTCGGGGAGAAGGAATGGTACTTTTTCAGCCCACGAGACAGGAAGTATC
CCAATGGGACGAGGCCTAACAGGGCAACTGTATCGGGATATTGGAAGGCC
ACGGGGACTGATAAGGCAATATATGGTGGGTCTAAATATCTTGGTGTCAA
GAAAGCTCTTGTTTTTTATAAGGGCAGGCCCCCCAAGGGGATCAAGACTG
ATTGGATCATGCATGAATATCGGCTAAATGACCCAACAAGACAACCCTAC
AAACATAATGGTTCCATGAAACTGGATGATTGGGTACTTTGTAGGATTTA
CAAAAAGAGGCAAACGGGATCAAGATCAGTTTTGGATGCAAAAGTCGAGG
AAGATCAATCATGTGTTGATCAATTACGCAAAACAGGAGGCTATGTTGAG
CATGCTAATGCTAGTGATGAACAGAAATTGATGGTGAAAT
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