CF835624

Overview
NameCF835624
Unique NameCF835624
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length821
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_ORYSJ (Exocyst complex component 5 OS=Oryza sativa subsp. japonica GN=SEC10 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59
Identity = 111/122 (90.98%), Postives = 119/122 (97.54%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 821
            AC R+VAYLSRVLE AF+ALEGLNKQ+FLTELGNRLHKGLLNHWQKFTF+PSGGLRLKRDITEYGEFVRSFNAPS+DEKFELLGIMANVFIVAPESL++LFEGTPSIRKDA RFIQLR+DYK
Sbjct:  671 ACIRIVAYLSRVLEVAFSALEGLNKQSFLTELGNRLHKGLLNHWQKFTFSPSGGLRLKRDITEYGEFVRSFNAPSIDEKFELLGIMANVFIVAPESLASLFEGTPSIRKDALRFIQLRDDYK 792          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_ARATH (Exocyst complex component 5 OS=Arabidopsis thaliana GN=SEC10 PE=2 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.244e-54
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKDAQRFIQLREDYK 821
            AC RVVAYLSRVLE+AFTALEGLNKQAFLTELGNRL K LL HWQKFTFNPSGGLRLKRD+ EY  FV+SF APSVDEKFELLGI+ANVFIVAP+SL TLFEG+PSIRKDAQRFIQLREDYK
Sbjct:  688 ACIRVVAYLSRVLESAFTALEGLNKQAFLTELGNRLEKLLLTHWQKFTFNPSGGLRLKRDLNEYVGFVKSFGAPSVDEKFELLGIIANVFIVAPDSLPTLFEGSPSIRKDAQRFIQLREDYK 809          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_HUMAN (Exocyst complex component 5 OS=Homo sapiens GN=EXOC5 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.101e-13
Identity = 39/125 (31.20%), Postives = 66/125 (52.80%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 821
            AC +V AY+ + +E    +++G N    L ELG R H+ +  H Q+++++  GG+    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  575 ACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_RAT (Exocyst complex component 5 OS=Rattus norvegicus GN=Exoc5 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 39/125 (31.20%), Postives = 65/125 (52.00%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 821
            AC +V AY+ + +E    +++G N    L ELG R H+    H Q+++++  GG+    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  575 ACVKVCAYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLTYEHLQQYSYSCMGGMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_DROME (Exocyst complex component 5 OS=Drosophila melanogaster GN=sec10 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.907e-13
Identity = 41/125 (32.80%), Postives = 68/125 (54.40%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 821
            AC +VV  L  V+      ++G N Q  LTE G RLH+ + +H Q   FN +G +    D+ EY + +R  ++P V + F++L  + N+ +V P++L  +  G      D    ++FIQLR D++
Sbjct:  573 ACLQVVQNLQPVIVQIKKCVDGENLQNVLTEFGTRLHRVIYDHLQTMQFNTAGAMCAICDVNEYRKCIRELDSPLVTQLFDILHALCNLLLVKPQNLQEVCTGDTLNYLDKSVVRQFIQLRTDFR 697          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_MOUSE (Exocyst complex component 5 OS=Mus musculus GN=Exoc5 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.848e-12
Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = -1
Query:  456 ACTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPSGGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEGTPSIRKD---AQRFIQLREDYK 821
            AC +V  Y+ + +E    +++G N    L ELG R H+ +  H Q+++++  G +    D+ EY +  + F  P V   F+ L  + N+ +VAP++L  +  G      D      F+QLR DY+
Sbjct:  575 ACVKVCVYVRKQVEKIKNSMDGKNVDTVLMELGVRFHRLIYEHLQQYSYSCMGDMLAICDVAEYRKCAKDFKIPMVLHLFDTLHALCNLLVVAPDNLKQVCSGEQLANLDKNILHSFVQLRADYR 699          
BLAST of CF835624 vs. ExPASy Swiss-Prot
Match: EXOC5_DICDI (Exocyst complex component 5 OS=Dictyostelium discoideum GN=exoc5 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.444e-11
Identity = 40/125 (32.00%), Postives = 65/125 (52.00%), Query Frame = -1
Query:  456 CTRVVAYLSRVLEAAFTALEGLNKQAFLTELGNRLHKGLLNHWQKFTFNPS-GGLRLKRDITEYGEFVRSFNAPSVDEKFELLGIMANVFIVAPESLSTLFEG---TPSIRKDAQRFIQLREDYK 818
            C  V+  +    + A   L+G N   ++ ELG +     +NH++KF      G L+L RD+TEY    + F +  VD+ FELL  ++ + +V PE+   + EG   T   ++D   FI+ R D+K
Sbjct:  847 CASVIKLIQSFYDMAKINLQGKNFHIYVEELGLKSQFVFINHFKKFKIGQGIGTLKLMRDLTEYRNLSKQFKSQKVDDAFELLFEISKLHLVNPENFKLVIEGGALTRMSKQDLIIFIKQRSDFK 971          
The following BLAST results are available for this feature:
BLAST of CF835624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
EXOC5_ORYSJ2.862e-5990.98Exocyst complex component 5 OS=Oryza sativa subsp.... [more]
EXOC5_ARATH1.244e-5487.70Exocyst complex component 5 OS=Arabidopsis thalian... [more]
EXOC5_HUMAN3.101e-1331.20Exocyst complex component 5 OS=Homo sapiens GN=EXO... [more]
EXOC5_RAT6.907e-1331.20Exocyst complex component 5 OS=Rattus norvegicus G... [more]
EXOC5_DROME6.907e-1332.80Exocyst complex component 5 OS=Drosophila melanoga... [more]
EXOC5_MOUSE5.848e-1229.60Exocyst complex component 5 OS=Mus musculus GN=Exo... [more]
EXOC5_DICDI8.444e-1132.00Exocyst complex component 5 OS=Dictyostelium disco... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_01J15_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835624 ID=CF835624; Name=CF835624; organism=Citrus sinensis; type=EST; length=821bp
TTTTTTTTTTTTTTTTGAACCAACCTTAAATGTCTTTTATTTACTTTTAA
AGAGTATCATTTACAAAGGTGCACTTAGAAACATATAATCTTTCCGACTT
GGAATGGTCAAAGTAAAAACTGCAAACCTAACATATAACTTAAATAGAAA
TGCTGCCTTAAAAATACAACCATCGTGTTTTCCCATTCACGTTTCCACAA
TATATACTCAAAAATGGTGGAATTGAGTAAAGAATATTATAAGAGAAAAA
CTCCAATATACCTGATTCTCAGGAGGAGATGATTCAGTTGTGCAACCAAA
ACTATCCACCATTAAGTATCGGCCTTCTCCCGCTATTAACTTCTTTAGGT
AAGATCTTCAAGAGAATTGGAAGGTCACCTTCATATCAGCATACCCCATC
AGTGTCAAGTAGAGCTTGCCCATAATGAGCTAAGCCTGGATGCAAGCTTT
GCACTCTTGTAGTCCTCTCTAAGCTGAATAAACCTTTGCGCATCTTTCCG
AATACTGGGGGTACCCTCAAACAAAGTAGATAGACTTTCAGGAGCAACAA
TAAAGACATTAGCCATGATGCCCAACAATTCAAATTTTTCATCAACAGAA
GGAGCGTTAAAGCTGCGCACAAATTCTCCATACTCGGTTATGTCACGCTT
CAGGCGTAATCCCCCACTGGGATTAAACGTGAATTTCTGCCAATGATTAA
GCAGGCCTTTATGTAAGCGGTTTCCCAATTCAGTCAGGAATGCTTGTTTA
TTGAGACCTTCTAGTGCAGTAAATGCAGCCTCAAGCACGCGGGAAAGGTA
AGCCACAACTCTCGTGCAGGC
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