CF835638

Overview
NameCF835638
Unique NameCF835638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length713
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1117 contig Csv1_Contig1117:1..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF3_ARATH (Glutathione S-transferase ERD13 OS=Arabidopsis thaliana GN=ERD13 PE=1 SV=3)

HSP 1 Score: 279.641 bits (714), Expect = 1.105e-74
Identity = 128/196 (65.31%), Postives = 164/196 (83.67%), Query Frame = 3
Query:  123 MVVKVYGPAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWD 710
            MV+ +Y P +AS KR ++ LVEK + FETV VDL+KGEQR PEYL +QPFG++PV+ DGD+ ++ESRAIMRY AEKYRSQG +LLGKTIEERG VEQWL+VEA +Y+P +  LT+ ++F+   G P DEK++KES+EKL + LDVYE +LSK++YLAGDF SLADL+H+PFT YLVGP+G+ H+I+DRKHVSAWWD
Sbjct:    1 MVLTIYAPLFASSKRAVVTLVEKGVSFETVNVDLMKGEQRQPEYLAIQPFGKIPVLVDGDYKIFESRAIMRYIAEKYRSQGPDLLGKTIEERGQVEQWLDVEATSYHPPLLALTLNIVFAPLMGFPADEKVIKESEEKLAEVLDVYEAQLSKNEYLAGDFVSLADLAHLPFTEYLVGPIGKAHLIKDRKHVSAWWD 196          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF7_ARATH (Glutathione S-transferase OS=Arabidopsis thaliana GN=At3g03190 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.113e-50
Identity = 97/198 (48.99%), Postives = 137/198 (69.19%), Query Frame = 3
Query:  123 MVVKVYGPAYAS-PKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            MVVKVYG   A+ P+RV+LC +EK+IEFE + VDL K EQ+ P++L  QPFG++P I+DG   L+ESRAI RYYA KY  QGT+LLGKT+E R +V+QW+EVE + +      L + ++F  K G+P D  LV+E   K  K LDVYE RL+ ++YL GD F+LADLSH+P   Y++       ++  R++++ WW++
Sbjct:    1 MVVKVYGQIKAANPQRVLLCFLEKDIEFEVIHVDLDKLEQKKPQHLLRQPFGQVPAIEDGYLKLFESRAIARYYATKYADQGTDLLGKTLEGRAIVDQWVEVENNYFYAVALPLVMNVVFKPKSGKPCDVALVEELKVKFDKVLDVYENRLATNRYLGGDEFTLADLSHMPGMRYIMNETSLSGLVTSRENLNRWWNE 198          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF1_ORYSJ (Probable glutathione S-transferase GSTF1 OS=Oryza sativa subsp. japonica GN=GSTF1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.239e-42
Identity = 91/197 (46.19%), Postives = 124/197 (62.94%), Query Frame = 3
Query:  129 VKVYGPAYASP-KRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGK-TIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKF-GRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWD 710
            VKV+GPA ++   RV+LCL E   E+E V VD    E +SPE+LK  PFG++P  QDGD  L+ESRAI +Y   KY+++  +LL +  + E  +V+ W EVE H YN AI  +  + + +    G P ++K+V ES EKL K L+VYE RLS+S YLAGDF S ADL+H P+T Y +G      +     HV AWW+
Sbjct:    4 VKVFGPAQSTNVARVLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYTFYFMG-TPYASLFDSYPHVKAWWE 199          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus PE=1 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 7.995e-41
Identity = 83/198 (41.92%), Postives = 124/198 (62.63%), Query Frame = 3
Query:  123 MVVKVYGPAYA-SPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            M +K++GPA + +  RVI  L EK+++FE VPV++  G+ +   ++ L PFG++P  +DGD  L+ESRAI +Y A  Y  +G +LL    ++  ++  W+EVE+  ++P   +LT +++     G   D+  V E++EKLGK LDVYE RL  SKYL GD F+LADL H P  +YL+G   +  +   R HVSAW  D
Sbjct:    1 MGMKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDPVASKLTFEIVIKPMLGMVTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKVKS-LFDSRPHVSAWCAD 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF_SILCU (Glutathione S-transferase OS=Silene cucubalus GN=GST PE=1 SV=3)

HSP 1 Score: 164.851 bits (416), Expect = 3.968e-40
Identity = 85/198 (42.93%), Postives = 126/198 (63.64%), Query Frame = 3
Query:  123 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRY--YAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYL-AGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            M +KV+G P   + +RV++ L EK +EFE VP+D+  G  + P YL L PFG++P ++DG+  L+ESRAI +Y  Y   ++++GT L+ K   E      W EVEAH ++P   +L  +L+F   FG   D  +V+E++ KL K LDVYE RL++S+YL A D F+L DL H+P   YL+G   ++ +  +R HVSAW
Sbjct:    1 MTIKVHGNPRSTATQRVLVALYEKHLEFEFVPIDMGAGGHKQPSYLALNPFGQVPALEDGEIKLFESRAITKYLAYTHDHQNEGTSLIHKEKHEMAAQLVWEEVEAHQFDPVASKLAWELVFKGIFGMQTDTTVVEENEAKLAKVLDVYEARLTESEYLGANDSFTLVDLHHLPLLGYLMGTQVKK-LFEERAHVSAW 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum GN=APIC PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.768e-40
Identity = 83/198 (41.92%), Postives = 121/198 (61.11%), Query Frame = 3
Query:  123 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            M +KV+G P   +  RV  CL+EK+++FE VPVD++ GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++  ++  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE RL++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  D
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKDLDFELVPVDMVSGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPIMSVWMEVEGQKFEPHASKLTWELGIKPIIGMTTDDDAVKESEVQLSKVLDIYETRLAESKYLGGDSFTLVDLHHIPNIYYLMSTKVKE-VFDSRPRVSAWCAD 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum GN=PARB PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 5.729e-39
Identity = 83/198 (41.92%), Postives = 119/198 (60.10%), Query Frame = 3
Query:  123 MVVKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWDD 713
            M +KV+G P   +  RV  CL+EKE++FE VPVD+  GE +   YL L PFG++P  +DGD  L+ESRAI +Y A  Y   G +L+ +  ++   +  W+EVE   + P   +LT +L      G   D+  VKES+ +L K LD+YE +L++SKYL GD F+L DL HIP  +YL+    ++ +   R  VSAW  D
Sbjct:    1 MAIKVHGSPMSTATMRVAACLIEKELDFEFVPVDMASGEHKKHPYLSLNPFGQVPAFEDGDLKLFESRAITQYIAHVYADNGYQLILQDPKKMPSMSVWMEVEGQKFEPPATKLTWELGIKPIIGMTTDDAAVKESEAQLSKVLDIYETQLAESKYLGGDSFTLVDLHHIPNIYYLMSSKVKE-VFDSRPRVSAWCAD 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF3_MAIZE (Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE=1 SV=4)

HSP 1 Score: 160.614 bits (405), Expect = 7.483e-39
Identity = 87/195 (44.62%), Postives = 117/195 (60.00%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAWWD 710
            +K+YG P   +  RV   L EK ++FE VPVDL  G  + P++L L PFG++P + DGD +L+ESRAI RY A KY S+GT+LL  T     L E WLEVE+H+++P    L  QLL     G   D  +V++  E+L K LDVYE  L+++KYLAGD F+LAD +H            R   +  R HV AWW+
Sbjct:    4 LKLYGMPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFESRAINRYIASKYASEGTDLLPATASAAKL-EVWLEVESHHFHPNASPLVFQLLVRPLLGGAPDAAVVEKHAEQLAKVLDVYEAHLARNKYLAGDEFTLADANHALLPALTSARPPRPGCVAARPHVKAWWE 197          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF6_ARATH (Glutathione S-transferase 6, chloroplastic OS=Arabidopsis thaliana GN=GST6 PE=1 SV=3)

HSP 1 Score: 156.762 bits (395), Expect = 1.081e-37
Identity = 79/194 (40.72%), Postives = 120/194 (61.86%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELLGKTIEE-RGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            +KV+G P   +  RV+  L EK+++FE +PVD+  G  +   +L L PFG++P ++DGD  L+ESRAI +Y AE+Y  +G +L+ +  ++ +     WL+VE   ++P   +L  + +F   FG   D   V+E + KL K LDVYE RL+KS++LAGD F+LADL H+P  HYL+G   +  +   R  VS W
Sbjct:   52 IKVHGVPMSTATMRVLATLYEKDLQFELIPVDMRAGAHKQEAHLALNPFGQIPALEDGDLTLFESRAITQYLAEEYSEKGEKLISQDCKKVKATTNVWLQVEGQQFDPNASKLAFERVFKGMFGMTTDPAAVQELEGKLQKVLDVYEARLAKSEFLAGDSFTLADLHHLPAIHYLLGTDSKV-LFDSRPKVSEW 244          
BLAST of CF835638 vs. ExPASy Swiss-Prot
Match: GSTF4_ARATH (Glutathione S-transferase PM24 OS=Arabidopsis thaliana GN=PM24.1 PE=1 SV=3)

HSP 1 Score: 156.377 bits (394), Expect = 1.411e-37
Identity = 81/196 (41.33%), Postives = 121/196 (61.73%), Query Frame = 3
Query:  129 VKVYG-PAYASPKRVILCLVEKEIEFETVPVDLIKGEQRSPEYLKLQPFGELPVIQDGDFILYESRAIMRYYAEKYRSQGTELL---GKTIEERGLVEQWLEVEAHNYNPAIYELTIQLLFSSKFGRPVDEKLVKESDEKLGKTLDVYEERLSKSKYLAGDFFSLADLSHIPFTHYLVGPMGRQHMIRDRKHVSAW 704
            +KV+G PA  + +RV++ L EK ++FE V V+L  GE +   +L   PFG++P  +DGD  L+ESRAI +Y A +Y +QGT LL    K I +  ++   ++VE H ++P   +L  + +F S +G   DE +V E + KL K LDVYE RL + KYLAG+ F+L DL HIP   YL+G   ++ +  +R  V+ W
Sbjct:    4 IKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAHRYENQGTNLLQTDSKNISQYAIMAIGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAKLAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYLLGTPTKK-LFTERPRVNEW 198          
The following BLAST results are available for this feature:
BLAST of CF835638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
GSTF3_ARATH1.105e-7465.31Glutathione S-transferase ERD13 OS=Arabidopsis tha... [more]
GSTF7_ARATH1.113e-5048.99Glutathione S-transferase OS=Arabidopsis thaliana ... [more]
GSTF1_ORYSJ4.239e-4246.19Probable glutathione S-transferase GSTF1 OS=Oryza ... [more]
GSTF_HYOMU7.995e-4141.92Glutathione S-transferase OS=Hyoscyamus muticus PE... [more]
GSTF_SILCU3.968e-4042.93Glutathione S-transferase OS=Silene cucubalus GN=G... [more]
GSTF2_TOBAC6.768e-4041.92Glutathione S-transferase APIC OS=Nicotiana tabacu... [more]
GSTF1_TOBAC5.729e-3941.92Glutathione S-transferase PARB OS=Nicotiana tabacu... [more]
GSTF3_MAIZE7.483e-3944.62Glutathione S-transferase 3 OS=Zea mays GN=GST3 PE... [more]
GSTF6_ARATH1.081e-3740.72Glutathione S-transferase 6, chloroplastic OS=Arab... [more]
GSTF4_ARATH1.411e-3741.33Glutathione S-transferase PM24 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01J24_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01J24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835638 ID=CF835638; Name=CF835638; organism=Citrus sinensis; type=EST; length=713bp
ACGATCCCACTATGGCGCCACTATATTAGCCTATATAAAAGGGATTAGCA
AACTGCCCGTAGATTACGATCACAAGCTCAATAGCTGCTTTTTATCGACA
GAAAAAGTTAACACCAGCAACGATGGTGGTCAAGGTGTACGGTCCGGCTT
ATGCTTCTCCCAAACGAGTGATTTTGTGCTTGGTTGAGAAGGAAATCGAA
TTTGAAACTGTCCCCGTTGATCTCATCAAAGGAGAGCAGAGAAGTCCTGA
GTACCTCAAATTACAGCCTTTTGGAGAGCTTCCTGTCATTCAAGATGGAG
ATTTTATTTTATACGAGTCGCGAGCTATCATGAGGTACTATGCCGAAAAG
TACAGGTCTCAAGGAACCGAACTTCTGGGTAAAACAATTGAAGAAAGAGG
CCTGGTGGAACAGTGGCTAGAAGTAGAGGCACACAACTACAACCCAGCAA
TTTACGAGCTGACCATCCAACTTTTATTTTCTTCCAAGTTTGGACGTCCC
GTTGATGAAAAATTGGTGAAGGAGAGTGACGAAAAGCTTGGAAAAACGCT
CGACGTTTACGAGGAGAGGCTCTCAAAGAGCAAGTATTTGGCTGGTGATT
TCTTCAGCCTGGCTGATCTGAGTCACATTCCATTTACCCACTACTTGGTT
GGGCCGATGGGGAGACAGCATATGATTAGAGACAGGAAGCATGTGAGTGC
TTGGTGGGATGAT
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