CF835651
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: SC61A_DICDI (Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum GN=sec61a PE=3 SV=1) HSP 1 Score: 375.555 bits (963), Expect = 1.516e-103 Identity = 179/240 (74.58%), Postives = 211/240 (87.92%), Query Frame = 3 Query: 3 FAGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSGHSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 FAGIIV+ LDELLQKGYG+GSGISLFIATNICE+I+WK FSPTT++ G+G EFEGAVIALFHLL+T+ +KV AL+EAFYRQNLPNITNLLATVL+F++V+YFQGF+V LPV+S GQQG YPIKLFYTSN+PIILQSALVSNLYFISQLLYR++ N VNL G W+ SEYS IPV GL YY+++P +++ + A+PFHALFY+ FMLT+CALFSK WIEVSGSSARDVAKQLK+QQ Sbjct: 158 FAGIIVMLLDELLQKGYGIGSGISLFIATNICETIVWKTFSPTTVSVGKGTEFEGAVIALFHLLLTRNDKVRALKEAFYRQNLPNITNLLATVLIFMVVIYFQGFRVDLPVKSTRVSGQQGTYPIKLFYTSNIPIILQSALVSNLYFISQLLYRRFPDNILVNLFGAWRTSEYSQQMIPVSGLTYYISSPNNMSAVLADPFHALFYITFMLTSCALFSKVWIEVSGSSARDVAKQLKDQQ 397
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A2_DANRE (Protein transport protein Sec61 subunit alpha-like 2 OS=Danio rerio GN=sec61al2 PE=2 SV=3) HSP 1 Score: 350.132 bits (897), Expect = 6.821e-96 Identity = 168/241 (69.71%), Postives = 201/241 (83.40%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+AT+ VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P S + +P HA+ Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATIFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYLSPPESFGTVLEDPIHAIIYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A1_DANRE (Protein transport protein Sec61 subunit alpha-like 1 OS=Danio rerio GN=sec61al1 PE=2 SV=3) HSP 1 Score: 350.132 bits (897), Expect = 6.821e-96 Identity = 170/241 (70.54%), Postives = 201/241 (83.40%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY++ P S + +P HA+ Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSSGGPARAYPVGGLCYYLSPPESFGSVLDDPVHAVIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: SC61A_GADOC (Protein transport protein Sec61 subunit alpha OS=Gadus ogac GN=sec61a PE=2 SV=3) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 170/241 (70.54%), Postives = 199/241 (82.57%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL YY + P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYYFSPPESFGSVLDDPVHASIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A2_MOUSE (Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus GN=Sec61a2 PE=2 SV=3) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 171/241 (70.95%), Postives = 202/241 (83.82%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A2_HUMAN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 171/241 (70.95%), Postives = 202/241 (83.82%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A2_BOVIN (Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus GN=SEC61A2 PE=2 SV=3) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 171/241 (70.95%), Postives = 202/241 (83.82%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTTIN+GRG EFEGAVIALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ +YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG+W + G S PVGGL YY++ P S+ + +P H + Y++FML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTINTGRGTEFEGAVIALFHLLATRTDKVRALREAFYRQNLPNLMNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYSSYPIKLFYTSNIPIILQSALVSNLYVISQMLSVRFSGNFLVNLLGQWADVSGGGPARSYPVGGLCYYLSPPESMGAIFEDPVHVVVYIIFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: S61A1_ONCMY (Protein transport protein Sec61 subunit alpha isoform A OS=Oncorhynchus mykiss GN=sec61aa PE=2 SV=3) HSP 1 Score: 348.206 bits (892), Expect = 2.592e-95 Identity = 169/241 (70.12%), Postives = 200/241 (82.99%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPN+ NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PVGGL Y+++ P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: SC61A_PAGBO (Protein transport protein Sec61 subunit alpha OS=Pagothenia borchgrevinki GN=sec61a PE=2 SV=3) HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95 Identity = 170/241 (70.54%), Postives = 199/241 (82.57%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398
BLAST of CF835651 vs. ExPASy Swiss-Prot
Match: SC61A_NOTAN (Protein transport protein Sec61 subunit alpha OS=Notothenia angustata GN=sec61a PE=2 SV=3) HSP 1 Score: 347.436 bits (890), Expect = 4.422e-95 Identity = 170/241 (70.54%), Postives = 199/241 (82.57%), Query Frame = 3 Query: 6 AGIIVICLDELLQKGYGLGSGISLFIATNICESIIWKAFSPTTINSGRGAEFEGAVIALFHLLITKQNKVGALREAFYRQNLPNITNLLATVLVFLIVVYFQGFKVVLPVRSKNARGQQGAYPIKLFYTSNMPIILQSALVSNLYFISQLLYRKYSGNFFVNLLGKWKESEYSG--HSIPVGGLAYYVTAPASLADMAANPFHALFYLVFMLTACALFSKTWIEVSGSSARDVAKQLKEQQ 722 AG+IV+ LDELLQKGYGLGSGISLFIATNICE+I+WKAFSPTT+N+GRG EFEGA+IALFHLL T+ +KV ALREAFYRQNLPNI NL+ATV VF +V+YFQGF+V LP++S RGQ YPIKLFYTSN+PIILQSALVSNLY ISQ+L ++SGNF VNLLG W ++ G + PV GL YY++ P S + +P HA Y+VFML +CA FSKTWIEVSGSSA+DVAKQLKEQQ Sbjct: 158 AGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNILNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDATSGGPARAYPVAGLCYYLSPPESFGSVLDDPVHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQ 398 The following BLAST results are available for this feature:
BLAST of CF835651 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835651 ID=CF835651; Name=CF835651; organism=Citrus sinensis; type=EST; length=724bpback to top |