CF835702

Overview
NameCF835702
Unique NameCF835702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1723 contig Csv1_Contig1723:629..1387. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP6_ARATH (Amino acid permease 6 OS=Arabidopsis thaliana GN=AAP6 PE=1 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 2.476e-107
Identity = 186/254 (73.23%), Postives = 211/254 (83.07%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXX-DVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPP-ENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCYGVYHVNSFRLVWRTAYVIV 758
            SMVAVKRSNCFH++GH+VKC TSN P MIIFA IQI+LSQIPNFH LSWLSILAAVMSF Y+SIG+GLSIAK  G G H            DVS +EK+WR FQAIGD+AFAYA+STVL+EIQDTLK+ PP ENK+MKRA+ VGV+TTT FY++CG +GY AFGNDAPGNFLTGFGFYEPFWLIDFAN CIAVHLIGAYQVFCQPIF FVE    KRWP+NKFIT E+ I+VPC G + +N  RLVWRT+YV+V
Sbjct:  142 SMVAVKRSNCFHKNGHNVKCATSNTPFMIIFAIIQIILSQIPNFHNLSWLSILAAVMSFCYASIGVGLSIAKAAGGGEHVRTTLTGVTVGIDVSGAEKIWRTFQAIGDIAFAYAYSTVLIEIQDTLKAGPPSENKAMKRASLVGVSTTTFFYMLCGCVGYAAFGNDAPGNFLTGFGFYEPFWLIDFANVCIAVHLIGAYQVFCQPIFQFVESQSAKRWPDNKFITGEYKIHVPCCGDFSINFLRLVWRTSYVVV 395          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP1_ARATH (Amino acid permease 1 OS=Arabidopsis thaliana GN=AAP1 PE=1 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.043e-97
Identity = 166/252 (65.87%), Postives = 206/252 (81.75%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCYGVYHVNSFRLVWRTAYVIV 758
            S+VAV +SNCFH  GH   C  SN P M +F  IQ++LSQIPNFHKLS+LSI+AAVMSF Y++IGIGL+IA V G               DV+A++K+WR+FQA+GD+AFAYA++TVL+EIQDTL+SSP ENK+MKRA+ VGV+TTT FYI+CG +GY AFGN+APG+FLT FGF+EPFWLIDFANACIAVHLIGAYQVF QPIF FVEK CN+ +P+NKFITSE+ +NVP  G ++++ FRLVWRTAYV++
Sbjct:  146 SLVAVGKSNCFHDKGHTADCTISNYPYMAVFGIIQVILSQIPNFHKLSFLSIMAAVMSFTYATIGIGLAIATVAGGKVGKTSMTGTAVGVDVTAAQKIWRSFQAVGDIAFAYAYATVLIEIQDTLRSSPAENKAMKRASLVGVSTTTFFYILCGCIGYAAFGNNAPGDFLTDFGFFEPFWLIDFANACIAVHLIGAYQVFAQPIFQFVEKKCNRNYPDNKFITSEYSVNVPFLGKFNISLFRLVWRTAYVVI 397          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP8_ARATH (Amino acid permease 8 OS=Arabidopsis thaliana GN=AAP8 PE=1 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 6.993e-94
Identity = 161/252 (63.89%), Postives = 197/252 (78.17%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCYGVYHVNSFRLVWRTAYVIV 758
            S+VA+ +SNC+H  GH  KC  SN P M  F  +QI+LSQ+PNFHKLS+LSI+AAVMSF+Y+SIGIGL+IA V                 DV+ASEKVW+ FQAIGD+AF+YAF+T+L+EIQDTL+SSPPENK MKRA+ VGV+TTT+FYI+CG +GY AFGN APG+FLT FGFYEP+WLIDFANACIA+HLIGAYQV+ QP F FVE+ CNK+WP++ FI  E+   VP  G   VN FRLVWRT YV++
Sbjct:  137 SLVAIGKSNCYHDKGHKAKCSVSNYPYMAAFGIVQIILSQLPNFHKLSFLSIIAAVMSFSYASIGIGLAIATVASGKIGKTELTGTVIGVDVTASEKVWKLFQAIGDIAFSYAFTTILIEIQDTLRSSPPENKVMKRASLVGVSTTTVFYILCGCIGYAAFGNQAPGDFLTDFGFYEPYWLIDFANACIALHLIGAYQVYAQPFFQFVEENCNKKWPQSNFINKEYSSKVPLLGKCRVNLFRLVWRTCYVVL 388          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP3_ARATH (Amino acid permease 3 OS=Arabidopsis thaliana GN=AAP3 PE=1 SV=2)

HSP 1 Score: 295.049 bits (754), Expect = 2.852e-79
Identity = 135/252 (53.57%), Postives = 187/252 (74.21%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCYGVYHVNSFRLVWRTAYVIV 758
            SM+A+KRSNCFH+ G    C+ ++NP MI F  +QI+ SQIP+F +L WLSILAAVMSF YSS G+ L IA+V+ +G              V+ ++K+WR FQA+GD+AFAY++S +L+EIQDT+KS P E K+MK+AT V V+ TT+FY++CG MGY AFG+ +PGN LTGFGFY P+WL+D ANA I +HLIGAYQV+CQP+F F+EK  + ++P+++FI  +  I +P +    +N FRL+WRT +VI+
Sbjct:  139 SMMAIKRSNCFHKSGGKDPCHMNSNPYMIAFGLVQILFSQIPDFDQLWWLSILAAVMSFTYSSAGLALGIAQVVVNGK-VKGSLTGISIGAVTETQKIWRTFQALGDIAFAYSYSIILIEIQDTVKSPPSEEKTMKKATLVSVSVTTMFYMLCGCMGYAAFGDLSPGNLLTGFGFYNPYWLLDIANAAIVIHLIGAYQVYCQPLFAFIEKQASIQFPDSEFIAKDIKIPIPGFKPLRLNVFRLIWRTVFVII 389          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP2_ARATH (Amino acid permease 2 OS=Arabidopsis thaliana GN=AAP2 PE=1 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 9.175e-78
Identity = 133/252 (52.78%), Postives = 186/252 (73.81%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCY-GVYHVNSFRLVWRTAYVI 755
            SM+A+KRSNCFH+ G    C+ S+NP MI+F   +I+LSQ+P+F ++ W+SI+AAVMSF YS+IG+ L I +V  +G              V+ ++K+WR FQA+GD+AFAY++S VL+EIQDT++S P E+K+MK+AT + +  TT+FY++CG MGY AFG+ APGN LTGFGFY PFWL+D ANA I VHL+GAYQVF QPIF F+EK   +R+P+N F++ E  I +P +   Y VN FR+V+R+ +V+
Sbjct:  155 SMMAIKRSNCFHKSGGKDPCHMSSNPYMIVFGVAEILLSQVPDFDQIWWISIVAAVMSFTYSAIGLALGIVQVAANGVFKGSLTGISIGT-VTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKKATKISIAVTTIFYMLCGSMGYAAFGDAAPGNLLTGFGFYNPFWLLDIANAAIVVHLVGAYQVFAQPIFAFIEKSVAERYPDNDFLSKEFEIRIPGFKSPYKVNVFRMVYRSGFVV 405          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP4_ARATH (Amino acid permease 4 OS=Arabidopsis thaliana GN=AAP4 PE=1 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 7.270e-75
Identity = 131/253 (51.78%), Postives = 181/253 (71.54%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCY-GVYHVNSFRLVWRTAYVIV 758
            SM+A+KRSNCFH  G    C+ S+NP MI+F   +I+LSQI +F ++ WLSI+AA+MSF YS+IG+ L I +V  +G              V+ ++K+WR FQA+GD+AFAY++S VL+EIQDT++S P E+K+MK AT + +  TT FY++CG MGY AFG+ APGN LTGFGFY PFWL+D ANA I +HL+GAYQVF QPIF F+EK    R+P++  +T E+ I +P +   Y VN FR V+R+ +V++
Sbjct:  128 SMMAIKRSNCFHESGGKNPCHMSSNPYMIMFGVTEILLSQIKDFDQIWWLSIVAAIMSFTYSAIGLALGIIQVAANGV-VKGSLTGISIGAVTQTQKIWRTFQALGDIAFAYSYSVVLIEIQDTVRSPPAESKTMKIATRISIAVTTTFYMLCGCMGYAAFGDKAPGNLLTGFGFYNPFWLLDVANAAIVIHLVGAYQVFAQPIFAFIEKQAAARFPDSDLVTKEYEIRIPGFRSPYKVNVFRAVYRSGFVVL 379          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP7_ARATH (Probable amino acid permease 7 OS=Arabidopsis thaliana GN=AAP7 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.495e-69
Identity = 124/253 (49.01%), Postives = 168/253 (66.40%), Query Frame = 3
Query:   12 AVKRSNCFHRHGHHVKCY--TSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCY--GVYHVNSFRLVWRTAYVIV 758
            A+ +SNC+HR+GH+  C    +NN  M++F   QI +SQIPNFH + WLS++AA+MSF YS IGIGL++ K+I    +             +  EKVW  FQA+G++AF+Y FS +L+EIQDTL+S P E ++MK+A+ V V   T F+  CG  GY AFG+  PGN LTGFGFYEPFWL+DFANACI +HL+G YQV+ QPIF   E+   K++PENKFI   +G  +P        +N  R+  RT YV++
Sbjct:  139 AIMKSNCYHRNGHNATCSYGDNNNYFMVLFGLTQIFMSQIPNFHNMVWLSLVAAIMSFTYSFIGIGLALGKII---ENRKIEGSIRGIPAENRGEKVWIVFQALGNIAFSYPFSIILLEIQDTLRSPPAEKQTMKKASTVAVFIQTFFFFCCGCFGYAAFGDSTPGNLLTGFGFYEPFWLVDFANACIVLHLVGGYQVYSQPIFAAAERSLTKKYPENKFIARFYGFKLPLLRGETVRLNPMRMCLRTMYVLI 388          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: AAP5_ARATH (Amino acid permease 5 OS=Arabidopsis thaliana GN=AAP5 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 4.564e-69
Identity = 122/256 (47.66%), Postives = 182/256 (71.09%), Query Frame = 3
Query:    3 SMVAVKRSNCFHRHGHHVKCYTSNNPLMIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGP-----HAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSPPENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKRWPENKFITSEHGINVPCYGVYHVNSFRLVWRTAYVI 755
            S+VA++R++C   +G +  C+ + N  MI F  +QI+ SQIP+F +L WLSI+AAVMSFAYS+IG+GL ++KV+ +                    V++S+K+WR FQ++G++AFAY++S +L+EIQDT+KS P E  +M++AT V V  TT+FY++CG +GY AFG++APGN L   GF  P+WL+D AN  I +HL+GAYQV+CQP+F FVEK  ++R+PE++F+T E  I +     +++N FRLVWRT +V+
Sbjct:  137 SLVAIQRTSCQQMNGPNDPCHVNGNVYMIAFGIVQIIFSQIPDFDQLWWLSIVAAVMSFAYSAIGLGLGVSKVVENKEIKGSLTGVTVGTVTLSGTVTSSQKIWRTFQSLGNIAFAYSYSMILIEIQDTVKSPPAEVNTMRKATFVSVAVTTVFYMLCGCVGYAAFGDNAPGNLLAHGGFRNPYWLLDIANLAIVIHLVGAYQVYCQPLFAFVEKEASRRFPESEFVTKEIKIQLFPGKPFNLNLFRLVWRTFFVM 392          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana GN=LHT2 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.659e-26
Identity = 69/184 (37.50%), Postives = 96/184 (52.17%), Query Frame = 3
Query:   84 MIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVE 629
            ++IFA +  V+S +PNF+ +S +S+ AAVMS  YS+I    S+ K    G H           DV    KV+    A+GDVAFAYA   V++EIQ T+ S+P  P    M R   V      + Y     +GY  FGN    N L      +P WLI  AN  + +H+IG+YQ+F  P+F  +E
Sbjct:  157 IMIFASVHFVISHLPNFNSISIISLAAAVMSLTYSTIAWAASVHK----GVHPDVDYSPRASTDVG---KVFNFLNALGDVAFAYAGHNVVLEIQATIPSTPEMPSKVPMWRGVIVAYIVVAICYFPVAFLGYYIFGNSVDDNIL--ITLEKPIWLIAMANMFVVIHVIGSYQIFAMPVFDMLE 331          
BLAST of CF835702 vs. ExPASy Swiss-Prot
Match: LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.008e-24
Identity = 68/190 (35.79%), Postives = 100/190 (52.63%), Query Frame = 3
Query:   84 MIIFACIQIVLSQIPNFHKLSWLSILAAVMSFAYSSIGIGLSIAKVIGDGPHAXXXXXXXXXXDVSASEKVWRAFQAIGDVAFAYAFSTVLVEIQDTLKSSP--PENKSMKRATAVGVTTTTLFYIMCGVMGYLAFGNDAPGNFLTGFGFYEPFWLIDFANACIAVHLIGAYQVFCQPIFGFVEKWCNKR 647
            ++IFA I  VL+ +PNF+ +S +S+ AAVMS +YS+I    S+ K    G H             + S  V+    A+GDVAFAYA   V++EIQ T+ S+P  P   +M +   V      + Y     + Y  FGN    N L      +P WLI  ANA + VH+IG+YQ++  P+F  +E +  K+
Sbjct:  157 IMIFASIHFVLAHLPNFNSISIVSLAAAVMSLSYSTIAWATSVKK----GVHPNVDYSSRAS---TTSGNVFNFLNALGDVAFAYAGHNVVLEIQATIPSTPEKPSKIAMWKGVVVAYIVVAICYFPVAFVCYYIFGNSVDDNIL--MTLEKPIWLIAIANAFVVVHVIGSYQIYAMPVFDMLETFLVKK 337          
The following BLAST results are available for this feature:
BLAST of CF835702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
AAP6_ARATH2.476e-10773.23Amino acid permease 6 OS=Arabidopsis thaliana GN=A... [more]
AAP1_ARATH1.043e-9765.87Amino acid permease 1 OS=Arabidopsis thaliana GN=A... [more]
AAP8_ARATH6.993e-9463.89Amino acid permease 8 OS=Arabidopsis thaliana GN=A... [more]
AAP3_ARATH2.852e-7953.57Amino acid permease 3 OS=Arabidopsis thaliana GN=A... [more]
AAP2_ARATH9.175e-7852.78Amino acid permease 2 OS=Arabidopsis thaliana GN=A... [more]
AAP4_ARATH7.270e-7551.78Amino acid permease 4 OS=Arabidopsis thaliana GN=A... [more]
AAP7_ARATH3.495e-6949.01Probable amino acid permease 7 OS=Arabidopsis thal... [more]
AAP5_ARATH4.564e-6947.66Amino acid permease 5 OS=Arabidopsis thaliana GN=A... [more]
LHT2_ARATH3.659e-2637.50Lysine histidine transporter 2 OS=Arabidopsis thal... [more]
LHTL2_ARATH2.008e-2435.79Lysine histidine transporter-like 2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01L20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01L20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835702 ID=CF835702; Name=CF835702; organism=Citrus sinensis; type=EST; length=759bp
TTAGCATGGTGGCTGTTAAAAGGTCAAATTGCTTCCACAGACATGGTCAT
CATGTCAAGTGCTACACATCAAACAATCCACTCATGATCATCTTTGCCTG
CATCCAGATTGTTCTTAGCCAAATACCAAACTTTCATAAGCTCTCCTGGC
TCTCAATTCTCGCTGCCGTAATGTCTTTTGCTTATTCCTCCATTGGAATT
GGCCTCTCCATAGCCAAAGTCATAGGTGATGGGCCGCATGCAACAACCTT
AACGGGGACAACAGTAGGAGTAGACGTGTCAGCATCAGAGAAGGTTTGGA
GAGCATTTCAGGCAATTGGGGACGTTGCTTTTGCTTATGCTTTTTCAACG
GTGCTCGTTGAGATTCAGGACACCCTGAAATCAAGTCCCCCAGAAAACAA
ATCCATGAAGAGGGCGACTGCTGTTGGCGTCACGACCACCACCTTGTTCT
ACATAATGTGCGGTGTAATGGGGTATTTAGCGTTTGGAAATGATGCACCT
GGAAACTTTCTCACCGGATTCGGATTCTACGAGCCTTTCTGGTTAATTGA
CTTCGCAAACGCCTGCATCGCTGTCCATCTCATTGGGGCTTACCAGGTAT
TCTGCCAACCAATATTCGGATTCGTTGAGAAGTGGTGTAACAAACGCTGG
CCAGAAAATAAGTTCATAACAAGCGAGCATGGCATTAATGTTCCATGTTA
TGGAGTGTATCATGTCAATTCATTTAGATTGGTTTGGAGAACAGCATACG
TTATTGTAT
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