CF835723
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2) HSP 1 Score: 277.715 bits (709), Expect = 3.806e-74 Identity = 130/190 (68.42%), Postives = 153/190 (80.53%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 +V S+VT FF+GIKNQA CAGKSFYTR +FLNAA++Y F + + + SKREIAAFFAHVTHETGH+CYI EIN +N YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AGK IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM+QGFGATI+ INGA+EC GK P V AR+ YYKDYC Sbjct: 83 SVESVVTEAFFNGIKNQAPNGCAGKSFYTRQSFLNAARSYSGFANDRTNDDSKREIAAFFAHVTHETGHMCYINEINGANMDYCDKSNKQWPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTALWFWMNNVHQVMSQGFGATIRAINGALECNGKNPGAVNARVNYYKDYC 272
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIA_MAIZE (Endochitinase A OS=Zea mays PE=1 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 8.479e-74 Identity = 127/189 (67.20%), Postives = 148/189 (78.31%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 NVA++VT FF+GIKNQA + C GK+FYTR AFL+A AYP F G EV KREIAAFFAHVTHETGH CYI EINKSN YCD N+Q+PC G+ YYGRGP+Q++ N NYG AG+ IGF+GL P VA+D V++FKTALWFWM NVH VM QGFGATI+ INGA+EC G PAQ+ AR+GYYK YC Sbjct: 79 NVANVVTDAFFNGIKNQAGSGCEGKNFYTRSAFLSAVNAYPGFAHGGTEVEGKREIAAFFAHVTHETGHFCYISEINKSNAYCDASNRQWPCAAGQKYYGRGPLQISWNYNYGPAGRDIGFNGLADPNRVAQDAVIAFKTALWFWMNNVHGVMPQGFGATIRAINGALECNGNNPAQMNARVGYYKQYC 267
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.037e-71 Identity = 127/190 (66.84%), Postives = 150/190 (78.95%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 +V S+VT FF+GIKNQA CAGK+FYTR +FLNAA +Y F + + SKREIAAFFAHVTHETGH+CYI EIN ++ YCD+ NKQ+PC PGK YYGRGP+Q++ N NYG AG+ IGFDGLR P+ VA+DP +SFKTALWFWM NVH VM QGFGATI+ INGA+EC GK P V AR+ YYKDYC Sbjct: 86 SVESVVTEAFFNGIKNQAPNGCAGKNFYTRQSFLNAAHSYSGFARDRTNDDSKREIAAFFAHVTHETGHMCYINEINGASMDYCDKNNKQWPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTALWFWMNNVHQVMLQGFGATIRAINGALECNGKNPGAVNARVNYYKDYC 275
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 4.355e-70 Identity = 121/189 (64.02%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVS-KREIAAFFAHVTHETGHLCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 NVAS+VT FF+GIKNQA + C GK+FYTR AFL+A K YP F G +V KREIAAFFAH THETGH CYI EINKSN YCD +Q+PC G+ YYGRGP+Q++ N NYG AG+AIGFDGL P VA+D VV+FK ALWFWM +VH V+ QGFGAT + + A+ECGG PAQ+ AR+GYY+ YC Sbjct: 68 NVASVVTSSFFNGIKNQAGSGCEGKNFYTRSAFLSAVKGYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEINKSNAYCDPTKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGATTRAMQRALECGGNNPAQMNARVGYYRQYC 256
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI4_PHAVU (Endochitinase PR4 OS=Phaseolus vulgaris GN=CHI4 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.664e-64 Identity = 120/189 (63.49%), Postives = 144/189 (76.19%), Query Frame = 2 Query: 116 ASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQN-KQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 A I+T F +GI +QA + CAGK+FYTRDAFL+A +Y FG GS + SKREIAA FAH THETGH CYIEEI+ +++ YCDE++ QYPC K Y+GRGPIQL+ N NYG AG A FDGL APETV+ D VVSFKTALW+WM +V PV+NQGFGATI+ INGA+EC G P VQAR+ YY +YC Sbjct: 69 ADILTADFLNGIIDQADSGCAGKNFYTRDAFLSALNSYTDFGRVGSEDDSKREIAAAFAHFTHETGHFCYIEEIDGASKDYCDEESIAQYPCSSSKGYHGRGPIQLSWNFNYGPAGSANNFDGLGAPETVSNDVVVSFKTALWYWMQHVRPVINQGFGATIRAINGALECDGANPTTVQARVNYYTEYC 257
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 242.662 bits (618), Expect = 1.357e-63 Identity = 114/189 (60.32%), Postives = 141/189 (74.60%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSGSPEVSKREIAAFFAHVTHETGHLCYIEEINKSNR-YCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 +V SIVT FF+GI NQA CAGK+FYTRD+F+NAA +P F + V++REIA FAH THETGH CYIEEIN ++R YCDE N+QYPC PGK Y+GRGPIQL+ N NYGA G+++ + L PE V+ +P V+F+T LWFWM +V PV+NQGFGATI+ ING +EC G V ARI YY+DYC Sbjct: 71 SVGSIVTQAFFNGIINQAGGGCAGKNFYTRDSFINAANTFPNFANS---VTRREIATMFAHFTHETGHFCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRPVLNQGFGATIRAING-MECNGGNSGAVNARIRYYRDYC 255
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 236.498 bits (602), Expect = 9.724e-62 Identity = 115/192 (59.90%), Postives = 140/192 (72.92%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFG-SGSPEVSKREIAAFFAHVTHETGHLCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHP--VMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 +VASIVTP+FF + QA CA K FYTRDAFL AA YP FG +GS + SKREIAAFFAH HET CYIEEI+ S YCDE + Q+PC+ GK YYGRGP+Q++ N NYG AG++IGFDGL P+ VA+ PV++F+TALW+W NVH V QGFGATI+ INGA+EC GK P V R+ YY+ +C Sbjct: 67 SVASIVTPEFFAALVAQADDGCAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIKFCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYWTNNVHDAFVSGQGFGATIRAINGALECDGKNPTAVSNRVAYYQQFC 258
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 115/193 (59.59%), Postives = 143/193 (74.09%), Query Frame = 2 Query: 113 VASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGSG-SPEVSKREIAAFFAHVTHETGHLCYIEEIN-KSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWM-TNVHPVM---NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 V+ IVT +F+DGI +QAAA+C GKSFYTR FL A AYP FG+ + E KREIAA+FAHVTHETGHLCYIEE + +N YC E ++QYPC P K Y+GRGP+QL+ N NY AGK + FDGL P+ V +DP++SFKT+LWFW+ V V+ NQGFGATI+ ING EC G AQ+ AR+GYY++YC Sbjct: 46 VSDIVTQEFWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQE-SQQYPCNPNKEYFGRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWIRKGVQYVILDPNQGFGATIRIINGGQECDGHNTAQMMARVGYYQEYC 237
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 4.517e-59 Identity = 116/192 (60.42%), Postives = 140/192 (72.92%), Query Frame = 2 Query: 110 NVASIVTPQFFDGIKNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGHLCYIEEINKS--NRYCDEQNK-QYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMTNVHPVMNQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 +V+ IV+ FFDGI QAAASC GK+FYTR AFL+A P+FG+ GS + +KREIAAFFAH++HET +LC+IEE + + YCD+ QYPC GK YYGRGP+QL+ N NY AG+AIGFDGL PE VA D SFK A+WFWMTNVH VMNQGFGAT + INGA+EC G+ Q RI +YK YC Sbjct: 86 SVSDIVSQAFFDGIIGQAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYCDQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMTNVHSVMNQGFGATTKAINGALECNGQNQDQANDRIQFYKKYC 275
BLAST of CF835723 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.724e-42 Identity = 94/223 (42.15%), Postives = 128/223 (57.40%), Query Frame = 2 Query: 113 VASIVTPQFFDGI-KNQAAASCAGKSFYTRDAFLNAAKAYPQFGS-GSPEVSKREIAAFFAHVTHETGH-------------LCYIEEINKSNRYCDEQNKQYPCVPGKFYYGRGPIQLTGNGNYGAAGKAIGFDGLRAPETVAKDPVVSFKTALWFWMT------NVHPVM---------------NQGFGATIQRINGAVECGGKQPAQVQARIGYYKDYC 673 V+SIV+ Q + + ++ A+C + FYT +F+ AA +P+F + G + KRE+AAF A ++HET LCY EEIN + YCD +KQ+PC PGK Y+GRGPIQ++ N NYG AG+A+GFDGLR PE VA ++F+TALWFWMT + H VM GFG +NG +EC A+V RIG+Y+ YC Sbjct: 49 VSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGEYRPGPADVAANRTAGFGLVTNIVNGGLECNRAGDARVNNRIGFYRRYC 271 The following BLAST results are available for this feature:
BLAST of CF835723 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835723 ID=CF835723; Name=CF835723; organism=Citrus sinensis; type=EST; length=673bpback to top |