CF835732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA6_MAIZE (Tubulin alpha-6 chain OS=Zea mays GN=TUBA6 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 8.442e-97 Identity = 172/197 (87.31%), Postives = 177/197 (89.85%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI PDGTMPSDTSVG HDAFNTFFSETGSG+HVPRA+FVDLEP+VIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_ELEIN (Tubulin alpha-3 chain OS=Eleusine indica GN=TUBA3 PE=2 SV=1) HSP 1 Score: 353.214 bits (905), Expect = 8.442e-97 Identity = 172/197 (87.31%), Postives = 177/197 (89.85%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI PDGTMPSDTSVG HDAFNTFFSETGSG+HVPRA+FVDLEP+VIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_ORYSJ (Tubulin alpha-1 chain OS=Oryza sativa subsp. japonica GN=TUBA1 PE=1 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 4.190e-96 Identity = 170/197 (86.29%), Postives = 177/197 (89.85%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI PDGTMPSDT+VG HDAFNTFFSETG+G+HVPRA+FVDLEP+VIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA3_ARATH (Tubulin alpha-3/alpha-5 chain OS=Arabidopsis thaliana GN=TUBA3 PE=2 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 1.592e-95 Identity = 170/197 (86.29%), Postives = 176/197 (89.34%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGNSCWELYCLEHGI PDG MPSDT+VG HDAFNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA5_MAIZE (Tubulin alpha-5 chain OS=Zea mays GN=TUBA5 PE=2 SV=1) HSP 1 Score: 348.206 bits (892), Expect = 2.716e-95 Identity = 170/197 (86.29%), Postives = 176/197 (89.34%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI DGTMPSD+SVG HDAFNTFFSETGSG+HVPRA+FVDLEP+VIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIEHDGTMPSDSSVGVAHDAFNTFFSETGSGKHVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_ARATH (Tubulin alpha-1 chain OS=Arabidopsis thaliana GN=TUBA1 PE=2 SV=1) HSP 1 Score: 347.436 bits (890), Expect = 4.632e-95 Identity = 168/197 (85.28%), Postives = 176/197 (89.34%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGNSCWELYCLEHGI PDGTMPSD++VGACHDAFNTFFSET SGQHVPRAVF+DLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVGREIVD CL+R+RKLADNCTGLQGFLVFNAV VD+GKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDV VLL Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVVVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA1_HORVU (Tubulin alpha-1 chain OS=Hordeum vulgare GN=TUBA1 PE=2 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 6.050e-95 Identity = 168/197 (85.28%), Postives = 177/197 (89.85%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI+ DGTMPSDT+VG HDAFNTFFSETG+G+HVPRA+FVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCLDRVRKLADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGINQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA_AVESA (Tubulin alpha chain OS=Avena sativa GN=TUBA PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.490e-93 Identity = 166/197 (84.26%), Postives = 175/197 (88.83%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI DGTMPSDT+VG HDAFNTFFSETG+G+HVPRA+FVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYTVG+EIVDLCL RVR+LADNCTGLQGFLVFNAV VDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQQDGTMPSDTTVGVAHDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLGRVRQLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA4_GOSHI (Tubulin alpha-4 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.152e-92 Identity = 163/197 (82.74%), Postives = 174/197 (88.32%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI PDG MPSD +VG DAFNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLL 204
BLAST of CF835732 vs. ExPASy Swiss-Prot
Match: TBA2_GOSHI (Tubulin alpha-2 chain OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 338.576 bits (867), Expect = 2.152e-92 Identity = 163/197 (82.74%), Postives = 174/197 (88.32%), Query Frame = 3 Query: 150 HIGQAGIQVGNSCWELYCLEHGIHPDGTMPSDTSVGACHDAFNTFFSETGSGQHVPRAVFVDLEPSVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDLCLDRVRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLL 740 HIGQAGIQVGN+CWELYCLEHGI PDG MPSD +VG DAFNTFFSETG+G+HVPRAVFVDLEP+VIDEVRTG+YRQLFHPEQLISGKEDAANNFARGHYT+G+EIVDLCLDR+RKLADNCTGLQGFLVFNAV VDYGKKSKLGFT+YPSPQVST+VVEPYNSVLSTHSLLEHTDVAVLL Sbjct: 8 HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLL 204 The following BLAST results are available for this feature:
BLAST of CF835732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 414
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835732 ID=CF835732; Name=CF835732; organism=Citrus sinensis; type=EST; length=741bpback to top |