CF835736
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RBP9X_DROME (Ran-binding proteins 9/10 homolog OS=Drosophila melanogaster GN=RanBPM PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.241e-19 Identity = 43/110 (39.09%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 261 VSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGINYAS 590 +S + L V Y V D V+ P P +YYFE+ + G G + IG T++ F+M R PGW+ S GYHGDDG + G G+ +GPTFTT D +G +N+ + Sbjct: 433 LSQNNLRVTYKGVGKQHSDAASVRTAYPIPSSCGLYYFEVRIISKGRNGYMGIGLTAQQFRMNRLPGWDKQSYGYHGDDGNSFSSSGNGQTYGPTFTTGDVIGCCVNFVN 542
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RBP10_DANRE (Ran-binding protein 10 OS=Danio rerio GN=ranbp10 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.215e-18 Identity = 41/110 (37.27%), Postives = 61/110 (55.45%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S + L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 53 YIGLSQNNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 162
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RBP10_MOUSE (Ran-binding protein 10 OS=Mus musculus GN=Ranbp10 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 93 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 202
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RBP10_HUMAN (Ran-binding protein 10 OS=Homo sapiens GN=RANBP10 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 174
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RBP10_BOVIN (Ran-binding protein 10 OS=Bos taurus GN=RANBP10 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.896e-18 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S L V Y + D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 65 YIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 174
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RANB9_MOUSE (Ran-binding protein 9 OS=Mus musculus GN=Ranbp9 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 102 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 211
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RANB9_HUMAN (Ran-binding protein 9 OS=Homo sapiens GN=RANBP9 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 41/110 (37.27%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S + L V Y D V+A P P +YYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 177 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 286
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RANB9_DANRE (Ran-binding protein 9 OS=Danio rerio GN=ranbp9 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.162e-17 Identity = 42/110 (38.18%), Postives = 60/110 (54.55%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 ++ +S + L V Y D V+A P P VYYFE+ + G G + IG +++ M R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 59 YIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAACGVYYFEVKIISKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 168
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RANB9_XENLA (Ran-binding protein 9 OS=Xenopus laevis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.678e-16 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 141
BLAST of CF835736 vs. ExPASy Swiss-Prot
Match: RANB9_XENTR (Ran-binding protein 9 OS=Xenopus tropicalis GN=ranbp9 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.191e-16 Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 3 Query: 252 FLVVSPDKLSVKYTSVNLHGHDVGVVQANKPAPVKRLVYYFEIYVEDAGAKGQIAIGFTSESFKMRRQPGWEANSCGYHGDDGLLYRGQGKGEAFGPTFTTNDTVGGGIN 581 +L +S L V Y D V++ P P ++YFE+ + G G + IG +++ + R PGW+ +S GYHGDDG + G G+ +GPTFTT D +G +N Sbjct: 32 YLGLSHGNLRVHYKGHGKTSKDAASVRSTHPIPAACGIFYFEVKIISKGRDGYMGIGLSTQGVNLSRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVN 141 The following BLAST results are available for this feature:
BLAST of CF835736 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835736 ID=CF835736; Name=CF835736; organism=Citrus sinensis; type=EST; length=596bpback to top |