CF835740
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RL7_CYAP8 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain PCC 8801) GN=rplL PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.396e-11 Identity = 41/126 (32.54%), Postives = 68/126 (53.97%), Query Frame = -3 Query: 182 QLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGVA 559 Q+ E++ SLT E ++ + + F + P+ + + P G APA + E ++EKT FDV I+K V+ LG+KEAK+LVE AP +K+ K++A +I ++++ AG A Sbjct: 7 QILEQLKSLTLLEASELVKQIEEAFGVSAAAPVGGGMMMMAPGGAAPAAA---EPEEEKTEFDVVLEDVPADKKIAILKVVRAITGLGLKEAKDLVESAPKPIKEATNKDDAESIKKQLEEAGAKA 129
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RL7_SYNJB (50S ribosomal protein L7/L12 OS=Synechococcus sp. GN=rplL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11 Identity = 40/129 (31.01%), Postives = 69/129 (53.49%), Query Frame = -3 Query: 191 PSDKVVQLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAG 577 PS++V ++ E + +L+ E ++ + + F + P + A A +A E +E+T FDV I+K V+ LG+K+AK+LVE AP +K+G+ KEEA++I +K++ AG Sbjct: 2 PSERVAKILEELKALSLLEASELVKAIEETFGVSAAAPAGGMVMAAPVAAAAAAPAAAPEPVEEQTAFDVILEAVPADKKIAILKVVRELTGLGLKDAKDLVEAAPKPVKEGVAKEEANDIKKKLEEAG 130
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RL7_COPPD (50S ribosomal protein L7/L12 OS=Coprothermobacter proteolyticus (strain ATCC 35245 / DSM 5265 / BT) GN=rplL PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.304e-11 Identity = 39/127 (30.71%), Postives = 68/127 (53.54%), Query Frame = -3 Query: 185 VVQLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGV 565 + ++ I +++ + ++ L ++F + P++ GP APA ++EKT+FDV ++K V+ LG+KEAK+LVE AP +K+G+TKEEA + +K++ AG V Sbjct: 3 IEEIISEIENMSVSQLAELVKALEEKFGVSASMPVAVAAPVAGPAAAAPA-------EEEKTSFDVILKEAGAKKLE-VIKVVREITGLGLKEAKDLVESAPKPIKEGVTKEEAEELKKKLEEAGAV 121
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RL7_RHIEC (50S ribosomal protein L7/L12 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=rplL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 41/128 (32.03%), Postives = 71/128 (55.47%), Query Frame = -3 Query: 182 VVQLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGVA 565 + ++ E ++SLT E ++ L +++ + P++ + G AG A ++EKT FDV ++KEV+ LG+KEAK+LVE AP +K+G++K EA++I +K++ AG A Sbjct: 4 LAKIVEDLSSLTVLEAAELSKLLEEKWGVSAAAPVAVAAV------GGAAGGAAAPAEEEKTEFDVILTDAGANKIN-VIKEVRAITGLGLKEAKDLVEGAPKAVKEGVSKAEAADIKKKLEDAGAKA 124
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RL7_CYAA5 (50S ribosomal protein L7/L12 OS=Cyanothece sp. (strain ATCC 51142) GN=rplL PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 40/123 (32.52%), Postives = 67/123 (54.47%), Query Frame = -3 Query: 191 QLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAG 559 ++ E++ SLT E ++ + + F + P + G+ + G A G+A E ++EKT FDV I+K V+ LG+KEAK++VE P +K+G KE+A +I +K++ AG Sbjct: 7 EILEKLKSLTLLEASELVKQIEEAFGVSAAAP--SGGMMMMAPGAAAPGAAAAEPEEEKTEFDVILEEVPGDKKIAILKVVRGITGLGLKEAKDMVESTPKPIKEGTGKEDAEDIKKKLEEAG 127
BLAST of CF835740 vs. ExPASy Swiss-Prot
Match: RK12_ODOSI (50S ribosomal protein L12, chloroplastic OS=Odontella sinensis GN=rpl12 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.927e-11 Identity = 43/134 (32.09%), Postives = 70/134 (52.24%), Query Frame = -3 Query: 173 SDKVVQLAERIASLTPEERRQIFLTLFKRFSLPKLQPISTEGLDLGPQGGAPAGSAHVEEKKEKTTFDVXXXXXXXXXXXKIVKEVKTFFDLGMKEAKELVEKAPVVLKQGLTKEEASNIIEKIKAAGGVAIME 574 S+K+ Q+ E + +LT E ++ + + F + + G AG A VEE +EKT FDV ++K V++ LG+KEAKELVE AP +++G+ K+ A ++I+ AGG A ++ Sbjct: 2 SEKIDQIVEELKTLTLLEASELVSKIEETFDVDASASVGG--------GMMMAGPAVVEEVEEKTEFDVMLDEVPADKKIAVLKVVRSLTGLGLKEAKELVESAPKQIQEGVAKDAAEEAKKQIEDAGGKASLK 127 The following BLAST results are available for this feature:
BLAST of CF835740 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835740 ID=CF835740; Name=CF835740; organism=Citrus sinensis; type=EST; length=633bpback to top |