CF835753

Overview
NameCF835753
Unique NameCF835753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1127 contig Csv1_Contig1127:1..699. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI194_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana GN=DI19-4 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23
Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1
Query:  130 YEEVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNISFTR 339
            YE+++GE     E+ CPFC+EDFD+VGLCCHIDEEHPVEAK+GVCPVC  RV +D+V HITTQH N   +   R
Sbjct:   34 YEDLEGEDDLKAEFICPFCAEDFDIVGLCCHIDEEHPVEAKNGVCPVCTKRVGLDIVGHITTQHANFFKVQRRR 107          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI197_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabidopsis thaliana GN=DI19-7 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 42/72 (58.33%), Postives = 55/72 (76.39%), Query Frame = 1
Query:  136 EVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNISFTR 339
            +V+GE     E+ CPFC+++FD+VGLCCHID  HPVEAK+GVCPVC  +V +D+V HITTQHGN+  +   R
Sbjct:   32 DVEGEDDLKAEFMCPFCADEFDIVGLCCHIDVNHPVEAKNGVCPVCTKKVGLDIVGHITTQHGNVFKVQRRR 103          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI193_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabidopsis thaliana GN=DI19-3 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.620e-20
Identity = 43/67 (64.18%), Postives = 52/67 (77.61%), Query Frame = 1
Query:  130 YEEVKGEYEY----PCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNI 318
            +EE+ GE E+     CPFCS+ FD+V LCCHIDE+HP+EAK+GVCPVC  RV +DMV HIT QH NI
Sbjct:   31 FEEIDGEEEFREEFACPFCSDYFDIVSLCCHIDEDHPMEAKNGVCPVCAVRVGVDMVAHITLQHANI 97          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI196_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabidopsis thaliana GN=DI19-6 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.421e-20
Identity = 40/74 (54.05%), Postives = 56/74 (75.68%), Query Frame = 1
Query:  130 YEEVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNISFTR 339
            +EE++GE     EY CPFCS+ FD+V LCCHIDE+HP++AK+GVCP+C  +V+ DM+ HIT QH N+  ++  R
Sbjct:   31 FEEIEGEDDFREEYACPFCSDYFDIVSLCCHIDEDHPMDAKNGVCPICAVKVSSDMIAHITLQHANMFKVTRKR 104          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI192_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica GN=DI19-2 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18
Identity = 39/64 (60.94%), Postives = 48/64 (75.00%), Query Frame = 1
Query:  133 EEVK---GEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGN 315
            EEV+   G   Y CPFC EDFD V  CCH+D+EH VEAKSGVCP+C TRV +D++ H+T QHG+
Sbjct:   43 EEVEARGGGEAYNCPFCGEDFDFVAFCCHVDDEHAVEAKSGVCPICATRVGVDLIGHLTMQHGS 106          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI195_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabidopsis thaliana GN=DI19-5 PE=1 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 4.182e-18
Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 1
Query:  154 EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNI 318
            +YPCPFCS+D+DLV LC HIDEEH ++A +G+CPVC  RV M MVDHITTQH ++
Sbjct:   42 DYPCPFCSDDYDLVELCHHIDEEHQLDANNGICPVCSRRVKMHMVDHITTQHRDV 96          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI192_ARATH (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabidopsis thaliana GN=DI19-2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 1
Query:   37 STSSSTNYQSTLKSQFAAXXXXXXXXXXXXHYEEVKGEY--EYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNI 318
            S+ SS +Y+S   +++ +             +EEV  +   EYPCPFC+ D+DLV LC HIDEEH  EA +G+CPVC  RV M MVDHIT+ H ++
Sbjct:   10 SSGSSRSYRSETAAKYQSGPYQDLE-----EFEEVDDDIAVEYPCPFCASDYDLVELCHHIDEEHRHEANNGICPVCSKRVKMHMVDHITSHHRDV 100          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI191_ARATH (Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thaliana GN=DI19-1 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 7.887e-17
Identity = 35/74 (47.30%), Postives = 53/74 (71.62%), Query Frame = 1
Query:  130 YEEVKGE----YEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHGNISNISFTR 339
            +EE+ G+     E+ CPFC+E +D++GLCCHID+EH +E+K+ VCPVC  +V +D+V HIT  HG++  +   R
Sbjct:   22 FEEIDGDDDFQEEFACPFCAESYDIIGLCCHIDDEHTLESKNAVCPVCSLKVGVDIVAHITLHHGSLFKLQRKR 95          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI194_ORYSJ (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica GN=DI19-4 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14
Identity = 31/64 (48.44%), Postives = 45/64 (70.31%), Query Frame = 1
Query:  130 YEEVKGEYE----YPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQH 309
            Y++V+ E E    +PCP+C ED D+  LC H+++EHP E+K   CPVC  R++ D++DHIT QH
Sbjct:   47 YDDVEPEDEVRPDFPCPYCYEDHDITSLCAHLEDEHPFESKVVACPVCSARISKDLLDHITLQH 110          
BLAST of CF835753 vs. ExPASy Swiss-Prot
Match: DI191_ORYSJ (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica GN=DI19-1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.102e-13
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  133 EEVKGEYEYPCPFCSEDFDLVGLCCHIDEEHPVEAKSGVCPVCVTRVTMDMVDHITTQHG 312
            EEV+ E+   CP+C ED D+V LC H++EEHP E  +  CP+C  ++  DM++HIT QHG
Sbjct:   36 EEVRPEFA--CPYCYEDHDVVSLCAHLEEEHPFEPHAAPCPICSDKIAKDMLNHITVQHG 93          
The following BLAST results are available for this feature:
BLAST of CF835753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DI194_ARATH9.619e-2363.51Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabid... [more]
DI197_ARATH2.620e-2058.33Protein DEHYDRATION-INDUCED 19 homolog 7 OS=Arabid... [more]
DI193_ARATH2.620e-2064.18Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Arabid... [more]
DI196_ARATH3.421e-2054.05Protein DEHYDRATION-INDUCED 19 homolog 6 OS=Arabid... [more]
DI192_ORYSJ1.101e-1860.94Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza ... [more]
DI195_ARATH4.182e-1867.27Protein DEHYDRATION-INDUCED 19 homolog 5 OS=Arabid... [more]
DI192_ARATH2.076e-1745.83Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Arabid... [more]
DI191_ARATH7.887e-1747.30Protein DEHYDRATION-INDUCED 19 OS=Arabidopsis thal... [more]
DI194_ORYSJ4.785e-1448.44Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza ... [more]
DI191_ORYSJ3.102e-1350.00Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa sub... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01N01_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835753 ID=CF835753; Name=CF835753; organism=Citrus sinensis; type=EST; length=699bp
GAAGATTCCCTGGATTACAGTAGATACTTTGGTCTTTCTACTTCATCATC
CACGAACTATCAGTCAACTCTCAAGTCTCAGTTTGCAGCGGATTTTTGCA
TTGATTTTGAGGATATAGAAGAAGATCATTATGAGGAAGTGAAAGGAGAG
TATGAGTATCCATGCCCATTTTGTTCGGAGGATTTTGATTTAGTTGGATT
ATGCTGTCATATTGATGAGGAACATCCTGTTGAAGCAAAGTCGGGGGTAT
GCCCTGTTTGCGTTACAAGGGTAACGATGGACATGGTTGATCACATAACA
ACACAACATGGAAACATTTCAAATATATCCTTCACGCGGTAGACTTGAAA
AGTGCCATTCTTTATTTCTGCTTTATTTCCTCCTTGGAATTTCTTGTCTT
TTCTTTTAACTCATTTTAGTTACTTTAGATTTCGCTTAAGTTCTTTACAT
GGCAATGATGATAAGTTGCTGCTATGCTTTACTTTCCTTAACAAGAGTTT
ACAGTTGGCACAAATTAAAACTTCATAAAGGCAACTCTAATTCAACTATA
TCATCTTTGAGGAAAGAGTTGCAAAATGCACATTTTCAATCTCTTCTTGC
AAGGTCATCCTCTTCTGTTTCTTCCTCCAAAAAGACATCTGATCCATGGC
TATCATTTATTTACAACATGCCTACTGCTGACGAGTCTGAAAGCATACA
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