CF835757

Overview
NameCF835757
Unique NameCF835757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length563
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7063 contig Csv1_Contig7063:158..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 6.206e-47
Identity = 95/189 (50.26%), Postives = 123/189 (65.08%), Query Frame = -2
Query:   11 LEENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSG---PSILPSDPYARAVARFWPAYVDEKLFPP-LKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIP-ETDKLAEF 562
            +EENLG KS+LLL S PVHK +PVL+   +PV ES +IV+Y+DE W       PS++PSDPY RAVARFW AYVD+K+ P  L  +  +   E + AA+ Q +  L  LE AF +CSKG PFFGG  +GF+ +  G YLGW    +K+I  +L+D  +TP L  W ERF A  A K V+P + DKL EF
Sbjct:   35 VEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAILFGSKTEEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEF 223          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.434e-35
Identity = 78/187 (41.71%), Postives = 117/187 (62.57%), Query Frame = -2
Query:    5 LEENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPL-KTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEFAK 562
            LEENLG+KS+LLLK  PVHKK+PV + N++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW  ++D+K+   + K++ + D  E +E  +E+  E L  LE+      K   FFGG + G + IA      W+ + +++  ++L    K P L+KW++ F   P V +V+P  D L  + K
Sbjct:   36 LEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKE-REKNVEETYEALQFLENEL----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPLFAYFK 215          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 6.025e-34
Identity = 79/195 (40.51%), Postives = 117/195 (60.00%), Query Frame = -2
Query:    5 LEENLG-SKSELLLKSTPVHKKIPVLI-PNDKPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQI--GFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEFAK 562
            L+E LG  KS+ LL + PV+ KIPVL+ P+ + +CES +IV+Y+++    SG +     +LP DPY RA+ RFW A++D+K +P L  +  A    A+  A E     L LLE+AF   S G  FF G     G L +A GC+L  +R  E++  + L+D   TP L  W++RF A PA K V+P+T+K+ +F +
Sbjct:   29 LDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQFTR 223          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.028e-33
Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = -2
Query:    5 EENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEFAK 559
            EE+L +KS LLL+  P+HKKIPVLI N KP+CES+I VEY++E W    P++LPSDPY RA ARFW  Y+D+KL+   + + +  G E +EAA +  IE L +LE A        P+FGG   GF+ IA   Y  W    E         E + P    WA+R     +V   +P+  K+ EF K
Sbjct:   35 EEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKG-EEQEAAKKDFIECLKVLEGAL----GDKPYFGGESFGFVDIALIGYYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVK 212          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 2.990e-33
Identity = 78/185 (42.16%), Postives = 106/185 (57.30%), Query Frame = -2
Query:    5 EENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEFAK 559
            +E+L +KS LLL+  P+HKKIPVLI N KP+CES+I VEY++E W    PS+LPSDPY RA ARFW  Y+D+KL+   + + +  G E +EAA +  IE L +LE A        P+FGG   GF+ IA   +  W    E         E + P    WA+R     +V   +P+  K+ EF K
Sbjct:   35 QEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKG-EEQEAAKKDFIECLKVLEGAL----GDRPYFGGESFGFVDIALIGFYSWFYAYETF--GNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVK 212          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 74/184 (40.22%), Postives = 101/184 (54.89%), Query Frame = -2
Query:   11 EENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGN-PFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEF 559
            EENL  KS LLL+  PVHKKIP+LI N K +CESL I+EY+DE W    P +LPSDPY R+ ARFW  Y+D+K++   + + S  G E +E A ++ IE L  LE        GN  +FGG  +GF+ +A   +  W    E      +  E + P L  WA+      +V   +P   K+  F
Sbjct:   35 EENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKG-EDQEEAKKEFIEILKTLEGEL-----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKIYGF 209          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 1.698e-28
Identity = 68/180 (37.78%), Postives = 100/180 (55.56%), Query Frame = -2
Query:   20 EENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKL 559
            EENL ++S LLL+  P+HKKIPVLI N KP+CES IIV+Y+DE W+   P ++PSDPY R+ ARFW  Y+D+K++   K +  + G E +E   ++LI     LE+         PF+G    GF+ +    +  W    E     K+  E + P L  W +R      V + +P+  K+
Sbjct:   34 EENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSP-LMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGK-KELISIFKQLEETLT----DKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKM--EEECPKLMAWVKRCMERETVSNTLPDAKKV 205          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.218e-28
Identity = 72/184 (39.13%), Postives = 105/184 (57.07%), Query Frame = -2
Query:   11 LEENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEF 562
            +EE+  +KS LLL+S PVHKK+PVLI N KP+ ES++I+EY+DE +   GPSILP DPY RA+ARFW  ++ +K+   + T       E +E   E++ E L +L++      K   FF G + GF  IA      W+ V E+   V L+   K P   +W + +     VK+ +P  D+L  F
Sbjct:   32 IEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDELLAF 207          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 2.896e-28
Identity = 72/184 (39.13%), Postives = 105/184 (57.07%), Query Frame = -2
Query:   11 LEENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEF 562
            +EE+  +KS LLL+S P+HKK+PVLI N K + ES++I+EY+DE +   GPSILP DPY RA+ARFW  ++D+K+   +KT       E +E   E++ E L +L++      K   FF G + GF  IA      W+ V E+   V L+   K P   KW   +     +K+ +P  D+L  F
Sbjct:   32 IEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF--LRKGEEQEKDKEEVCEMLKVLDNEL----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDELLAF 207          
BLAST of CF835757 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.427e-28
Identity = 72/184 (39.13%), Postives = 104/184 (56.52%), Query Frame = -2
Query:   11 LEENLGSKSELLLKSTPVHKKIPVLIPNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYARAVARFWPAYVDEKLFPPLKTIGSADGAEAKEAAIEQLIEGLVLLEDAFVKCSKGNPFFGGSQIGFLAIAFGCYLGWVRVPEKMIEVKLLDEVKTPGLFKWAERFCADPAVKDVIPETDKLAEF 562
            +EE+  +KS LLL+S PV+KK+PVLI N KP+ ES+II+EY+DE +   GPSILP DPY RA+ARFW  ++D+K+   + T       E +E   E++ E L +L++      K   FF G + GF  IA      W+ V E+     L+   K P   KW + +     V + +P  D+L  F
Sbjct:   32 IEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVAAVVNTFFRK--GEEQEKGKEEVYEMLKVLDNEL----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDELLAF 207          
The following BLAST results are available for this feature:
BLAST of CF835757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ6.206e-4750.26Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX6_SOYBN1.434e-3541.71Probable glutathione S-transferase OS=Glycine max ... [more]
GSTX2_MAIZE6.025e-3440.51Probable glutathione S-transferase BZ2 OS=Zea mays... [more]
GSTX4_TOBAC1.028e-3342.70Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC2.990e-3342.16Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTXA_TOBAC1.698e-2840.22Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_SOYBN1.698e-2837.78Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX3_TOBAC2.218e-2839.13Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC2.896e-2839.13Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC8.427e-2839.13Probable glutathione S-transferase OS=Nicotiana ta... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01N05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01N05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835757 ID=CF835757; Name=CF835757; organism=Citrus sinensis; type=EST; length=563bp
AACCCTTAGCAAACTCTGCAAGCTTATCAGTCTCAGGGATAACATCTTTG
ACAGCGGGATCAGCACAGAATCTCTCAGCCCATTTGAACAGTCCAGGAGT
TTTGACTTCATCAAGGAGCTTCACCTCAATCATTTTCTCTGGCACTCTCA
CCCATCCCAAGTAGCAACCAAATGCAATGGCAAGAAACCCAATTTGGCTT
CCACCAAAGAAAGGGTTCCCTTTGCTACACTTAACAAAAGCATCCTCCAG
CAAAACCAAGCCTTCAATCAATTGCTCAATCGCAGCTTCCTTAGCTTCCG
CTCCATCTGCACTACCAATGGTTTTCAAGGGAGGGAACAACTTCTCATCA
ACATAAGCGGGCCAGAAACGAGCAACGGCACGGGCATAAGGATCAGAAGG
AAGAATAGAGGGACCTGAAGAGGACCAAGCCTCATCCACGTACTCGACAA
TGATGAGAGATTCGCAAACAGGCTTATCATTGGGAATCAGAACTGGGATT
TTCTTGTGAACAGGGGTTGATTTAAGCAGAAGCTCGCTTTTGGATCCCAA
ATTCTCCTCCAGA
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