CF835774

Overview
NameCF835774
Unique NameCF835774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length814
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835774_ssr487 microsatellite CF835774_ssr487:487..507. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12387 contig Csv1_Contig12387:261..1075. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC7_ORYSJ (Probable xyloglucan glycosyltransferase 7 OS=Oryza sativa subsp. japonica GN=CSLC7 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.724e-70
Identity = 136/187 (72.73%), Postives = 144/187 (77.01%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            YSFTLFC+ILPMTMF+PEAELPAWVVCYIPATMS LNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLV LVEK SK  +  S PNL  +   TK+E           HNRIY KE                  QGIHFYFLLFQGVSFL+VGLDLIGEQ++
Sbjct:  505 YSFTLFCVILPMTMFVPEAELPAWVVCYIPATMSILNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVGLVEKHSKQQRVGSAPNLDAL---TKEESNPKKDSKKKKHNRIYRKELALSFLLLTAAARSLLSAQGIHFYFLLFQGVSFLVVGLDLIGEQVE 688          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLCC_ARATH (Probable xyloglucan glycosyltransferase 12 OS=Arabidopsis thaliana GN=CSLC12 PE=1 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.558e-70
Identity = 146/231 (63.20%), Postives = 160/231 (69.26%), Query Frame = 1
Query:    4 TGTILLFNLVL------QISMGXXXXXXXXXXXXXXXXXXXYSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKE---SKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            +G + LF L L      +IS+G                   YSFTLFCIILPMTMF+PEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAM+SGLFQLGSAYEWVVTKKSGRSSEGDL +LVEK+   +KH +G S P   E + E K EK          HNRIYMKE                  QGIHFYFLLFQG+SFLLVGLDLIGEQ++
Sbjct:  475 SGPMQLFRLCLPAVIKSKISIGKKFNLIFLFFLLRKLILPFYSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSAYEWVVTKKSGRSSEGDLAALVEKDEKTTKHQRGVSAP---ETEAEKKAEK---TKRKKKKHNRIYMKELSLAFLLLTAATRSLLSAQGIHFYFLLFQGISFLLVGLDLIGEQVE 699          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC1_ORYSJ (Probable xyloglucan glycosyltransferase 1 OS=Oryza sativa subsp. japonica GN=CSLC1 PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.558e-70
Identity = 136/187 (72.73%), Postives = 145/187 (77.54%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            YSFTLFCIILPMTMF+PEAELPAWVVCYIPATMS LNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEK+ K  +  S PNL  +  E+  +K          HNRIY KE                  QGIHFYFLLFQGVSFL+VGLDLIGEQ++
Sbjct:  508 YSFTLFCIILPMTMFVPEAELPAWVVCYIPATMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKQPKQQRVGSAPNLDSLAKESHPKK----DSKKKKHNRIYQKELALSFLLLTAAARSLLSVQGIHFYFLLFQGVSFLVVGLDLIGEQVE 690          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC9_ORYSJ (Probable xyloglucan glycosyltransferase 9 OS=Oryza sativa subsp. japonica GN=CSLC9 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.349e-68
Identity = 130/187 (69.52%), Postives = 141/187 (75.40%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            YSFTLFCIILPMTMF+PEAELP WVVCYIPA MS LNILP+PKSFPFI+PYLLFENTMSVTKFNAMISGLFQLG+AYEWVVTKKSGRSSEGDL+SL  KE KH K  S PNL  +     +E+          HNRIY KE                  QGIHFYFLLFQG+SFLLVGLDLIGEQ++
Sbjct:  413 YSFTLFCIILPMTMFVPEAELPDWVVCYIPALMSLLNILPSPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGNAYEWVVTKKSGRSSEGDLISLAPKELKHQKTESAPNLDAI----AKEQSAPRKDVKKKHNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLLFQGISFLLVGLDLIGEQIE 595          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSJ (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. japonica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.710e-64
Identity = 126/186 (67.74%), Postives = 141/186 (75.81%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQL 666
            YSFTLFCIILPMTMFIPEAELP WVVCYIPA MSFLNILPAPKSFPFI+PYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDL++L  KE K  K   + +L+ +K ++  ++          +NRIY KE                  QGIHFYFL+FQG+SFLLVGLDLIGE +
Sbjct:  503 YSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLIALAPKELKQQK---ILDLTAIKEQSMLKQSSPRNEAKKKYNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLMFQGLSFLLVGLDLIGEDV 685          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLCA_ORYSI (Putative xyloglucan glycosyltransferase 10 OS=Oryza sativa subsp. indica GN=CSLC10 PE=3 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.710e-64
Identity = 126/186 (67.74%), Postives = 141/186 (75.81%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQL 666
            YSFTLFCIILPMTMFIPEAELP WVVCYIPA MSFLNILPAPKSFPFI+PYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDL++L  KE K  K   + +L+ +K ++  ++          +NRIY KE                  QGIHFYFL+FQG+SFLLVGLDLIGE +
Sbjct:  503 YSFTLFCIILPMTMFIPEAELPDWVVCYIPALMSFLNILPAPKSFPFIIPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLIALAPKELKQQK---ILDLTAIKEQSMLKQSSPRNEAKKKYNRIYKKELALSLLLLTAAARSLLSKQGIHFYFLMFQGLSFLLVGLDLIGEDV 685          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC5_ARATH (Probable xyloglucan glycosyltransferase 5 OS=Arabidopsis thaliana GN=CSLC5 PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 7.945e-62
Identity = 116/190 (61.05%), Postives = 141/190 (74.21%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHNKGSSVPNLSEVKM----ETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQL 666
            YSFTLFCIILP+TMF+PEAELP WV+CYIP  MSFLN+LP+PKSFPFIVPYLLFENTMSVTKFNAM+SGLFQLGS+YEW+VTKK+GRSSE DL+S+ EKE+   K   +  +S+ ++    + +++K           N+IY KE                  QG+HFYFLLFQGV+FLLVGLDLIGEQ+
Sbjct:  502 YSFTLFCIILPLTMFVPEAELPVWVICYIPVFMSFLNLLPSPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLSITEKETPTKKSQLLRGVSDSELLELSQLEEQKQAVSKKPVKKTNKIYHKELALAFLLLTAALRSLLAAQGVHFYFLLFQGVTFLLVGLDLIGEQM 691          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSI (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. indica GN=CSLC2 PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 8.784e-61
Identity = 118/193 (61.14%), Postives = 140/193 (72.54%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKH------NKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MSFLNILP+P+SFPFIVPYLLFENTMSVTKFNAM+SGLF+LGS+YEW+VTKKSGRSSE DL + VE+++K        K  S   L ++KM+  +E+           N+IY KE                  QGIHFYFLLFQGVSFL VGLDLIGEQ+D
Sbjct:  508 YSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVTKFNAMVSGLFKLGSSYEWIVTKKSGRSSESDLSTAVERDTKDLTLPRLQKQISESELIDLKMQ--KERQEKAPLGAKKANKIYKKELALSLLLLTAATRSLLSAQGIHFYFLLFQGVSFLFVGLDLIGEQID 698          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC2_ORYSJ (Probable xyloglucan glycosyltransferase 2 OS=Oryza sativa subsp. japonica GN=CSLC2 PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 1.498e-60
Identity = 117/193 (60.62%), Postives = 139/193 (72.02%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKH------NKGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQLD 669
            YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MSFLNILP+P+SFPFIVPYLLFENTMSVTKFNAM+SGLF+LGS+YEW+VTKKSGRSSE DL +  E+++K        K  S   L E+KM+  +E+           N++Y KE                  QGIHFYFLLFQGVSFL VGLDLIGEQ+D
Sbjct:  508 YSFTLFCVILPLTMFVPEAELPVWVICYVPVCMSFLNILPSPRSFPFIVPYLLFENTMSVTKFNAMVSGLFKLGSSYEWIVTKKSGRSSESDLSTAAERDTKDLTLPRLQKQISESELIELKMQ--KERQEKAPLGAKKANKVYKKELALSLLLLTAATRSLLSAQGIHFYFLLFQGVSFLFVGLDLIGEQID 698          
BLAST of CF835774 vs. ExPASy Swiss-Prot
Match: CSLC8_ARATH (Probable xyloglucan glycosyltransferase 8 OS=Arabidopsis thaliana GN=CSLC8 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 2.164e-59
Identity = 116/191 (60.73%), Postives = 139/191 (72.77%), Query Frame = 1
Query:  109 YSFTLFCIILPMTMFIPEAELPAWVVCYIPATMSFLNILPAPKSFPFIVPYLLFENTMSVTKFNAMISGLFQLGSAYEWVVTKKSGRSSEGDLVSLVEKESKHN-----KGSSVPNLSEVKMETKQEKMVSXXXXXXXHNRIYMKEXXXXXXXXXXXXXXXXXXQGIHFYFLLFQGVSFLLVGLDLIGEQL 666
            YSFTLFC+ILP+TMF+PEAELP WV+CY+P  MS LNILPAPKSFPFIVPYLLFENTMSVTKFNAM+SGLFQLGS+YEW+VTKK+GRSSE DL++L +KES+       +G S   L E+    +Q+K           N+I+ KE                  QG+HFYFLLFQG++FLLVGLDLIGEQ+
Sbjct:  502 YSFTLFCVILPITMFVPEAELPIWVICYVPIFMSLLNILPAPKSFPFIVPYLLFENTMSVTKFNAMVSGLFQLGSSYEWIVTKKAGRSSESDLLALTDKESEKMPNQILRGVSDSELLEISQVEEQKKQ---PVSVKKTNKIFHKELALAFLLLTAAVRSLLASQGVHFYFLLFQGLTFLLVGLDLIGEQM 689          
The following BLAST results are available for this feature:
BLAST of CF835774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
CSLC7_ORYSJ2.724e-7072.73Probable xyloglucan glycosyltransferase 7 OS=Oryza... [more]
CSLCC_ARATH3.558e-7063.20Probable xyloglucan glycosyltransferase 12 OS=Arab... [more]
CSLC1_ORYSJ3.558e-7072.73Probable xyloglucan glycosyltransferase 1 OS=Oryza... [more]
CSLC9_ORYSJ4.349e-6869.52Probable xyloglucan glycosyltransferase 9 OS=Oryza... [more]
CSLCA_ORYSJ1.710e-6467.74Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLCA_ORYSI1.710e-6467.74Putative xyloglucan glycosyltransferase 10 OS=Oryz... [more]
CSLC5_ARATH7.945e-6261.05Probable xyloglucan glycosyltransferase 5 OS=Arabi... [more]
CSLC2_ORYSI8.784e-6161.14Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC2_ORYSJ1.498e-6060.62Probable xyloglucan glycosyltransferase 2 OS=Oryza... [more]
CSLC8_ARATH2.164e-5960.73Probable xyloglucan glycosyltransferase 8 OS=Arabi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01N21_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835774 ID=CF835774; Name=CF835774; organism=Citrus sinensis; type=EST; length=814bp
CTGACTGGTACTATTCTGTTATTTAATTTGGTTTTGCAGATAAGCATGGG
GAAGAAATTTAATTTGATCTTTCTTTTCTTTCTGCTCAGAAAACTTATCC
TACCATTTTATTCTTTCACCCTCTTTTGTATAATTCTTCCCATGACAATG
TTTATCCCAGAGGCTGAGCTCCCTGCTTGGGTCGTCTGTTACATACCGGC
CACCATGTCATTTCTCAACATTCTCCCTGCTCCAAAATCCTTCCCATTTA
TTGTCCCTTACCTTCTTTTTGAAAACACAATGTCAGTGACCAAGTTCAAT
GCCATGATATCTGGCCTCTTCCAGCTCGGAAGTGCGTATGAGTGGGTCGT
TACCAAGAAATCCGGCCGCTCCTCTGAGGGTGATCTTGTTTCATTGGTTG
AGAAAGAGTCAAAACATAATAAGGGGTCCTCTGTACCCAACCTCAGTGAA
GTGAAGATGGAAACTAAACAAGAGAAAATGGTTTCCAAGAAGAAGAAGAA
GAAGAAGCATAATAGGATATACATGAAGGAATTGACACTGGCCTTCCTTC
TATTAACAGCTTCAGCTAGGAGCCTCCTGTCTGCTCAAGGGATCCATTTC
TACTTCTTACTCTTTCAGGGGGTATCATTCCTGCTCGTTGGTCTAGACTT
GATTGGTGAGCAGCTTGATTGAAGGCAAACAATAGGCATTGTAGGATAAG
ATATGGATAATTTCAGGCATACATGAAATGGGTGGACATCAGATAGTTAA
TTATCACTGAAACAAACCATCTGCGGGGGGGACTTTAGAGGGCCGTGACT
GCTCTGCTTGCTTG
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