CF835800

Overview
NameCF835800
Unique NameCF835800
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1911 contig Csv1_Contig1911:482..1279. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.300e-58
Identity = 118/214 (55.14%), Postives = 145/214 (67.76%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQD--KFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPGIVSC+D++AL  RD++      P  WEV TGRRDG V+   EA L LPSPF N S L   F  KGL  KDLVVLSGGHTIG  HC   +NRLYNFTG GD DP+LD  YA  L+ KCK   DTTT  E+DPGSF+ FD  Y+ ++ + +GLFQSDAALL N+  ++ V++  N D   FF +F  SM +MG + VLTG  GE+RKKC ++N
Sbjct:  119 CPGIVSCSDVLALVARDAM-VALNGPS-WEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRGKCKP-TDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 3.923e-58
Identity = 119/217 (54.84%), Postives = 151/217 (69.59%), Query Frame = -2
Query:  156 SRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKT-KCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELR--NQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 797
            S+CPGIVSCADI+ LATRDS+      P  W V TGRRDG +S  AEA   +P PF NF+ L   F ++GL VKDLV+LSG HTIGVSHC+ FSNRL+NFTG GDQDPSLD  YA  LK+ +C S+AD TT  E+DPGS   FD  YY ++++ +GLF+SDAAL  N  A   V      ++ +FF EF+ SM++MG + V TG+ GEIR+ C+ +N
Sbjct:  112 SKCPGIVSCADIITLATRDSI-VAIGGPT-WNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 6.692e-58
Identity = 117/218 (53.67%), Postives = 158/218 (72.48%), Query Frame = -2
Query:  153 SRCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKT-KCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMEL--RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 797
            ++CPGIVSCADI+ALA+RD+V F    P+ W V TGRRDG +S AAEA   +P P +N + L+  F ++GL +KDLV+LSG HTIGVSHC+ F+NRLYNFTG G QDP+LD  YAA LK+ KC SL D  T  E+DPGS + FD  YY ++++ +GLFQSD+AL TN    + +  +   +   FF+EFA+SM++MG +NV TG+ G +R++CSV N+
Sbjct:  111 AQCPGIVSCADIIALASRDAVVFT-GGPN-WSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVANS 326          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 3.672e-56
Identity = 117/214 (54.67%), Postives = 142/214 (66.36%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVME--LRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPGIVSC+DI+AL  RD++    + P  WEV TGRRDG VS   E +L  PSPF N ++L  +F  KGL  KDLV+LSGGHTIG+ HC   +NRLYNFTG GD DPSLD  YAA L+ KCK   DTTT  E+DPGSF+ FD  Y+ ++ + +GLFQSDAALL N   R  V++    +   FF +F  SM +MG   VLTG  GEIRK C   N
Sbjct:  113 CPGIVSCSDILALVARDAM-VALEGPS-WEVETGRRDGRVSNINEVNL--PSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLRKKCKP-TDTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 215.312 bits (547), Expect = 3.109e-55
Identity = 118/218 (54.13%), Postives = 145/218 (66.51%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTG---NGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN---QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG VSCAD++AL  RD+V     K   W V  GRRDG VSIA E D L P P ANF+EL + F  K L +KDLVVLS GHTIG SHC  F++RLYNFTG     D DP+L+ +Y A L++KC SL D TT  E+DPGSF+ FD  Y+  + + +GLF SD  LLTN   R  V        +D+FF +FA SM +MG + VLTG+QGEIRKKC+V+N
Sbjct:  112 CPGTVSCADVLALMARDAV--WLSKGPFWAVPLGRRDGRVSIANETDQL-PPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRSKCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER24_ARATH (Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.706e-53
Identity = 115/218 (52.75%), Postives = 147/218 (67.43%), Query Frame = -2
Query:  156 RCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC--KSL-ADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLT-GTQ-GEIRKKCSVIN 794
            RCP  VSCADI+ LA RD+VS++F++P LW V TGR DG VS+A EA   LPS  ANF+ L+K F +  L V DLV LSG HTIG++HC  F  RL NFTG GD DPSL+P YA+FLK++C  KSL  + +    +DP     FDS Y+  L++NKGLF SDAALLT+  A +I    +N   F  +F +SM +M ++ VLT G Q GEIRK C ++N
Sbjct:  134 RCPNTVSCADILTLAARDAVSYEFERP-LWNVFTGRVDGRVSLATEAARDLPSAGANFTTLQKLFAESDLDVVDLVALSGAHTIGIAHCGVFGRRLLNFTGKGDTDPSLNPSYASFLKSECSDKSLRLNPSAVVGMDPTGPLAFDSGYFVSLLKNKGLFTSDAALLTDPSAAHIASVFQNSGAFLAQFGRSMIKMSSIKVLTLGDQGGEIRKNCRLVN 350          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.800e-53
Identity = 110/213 (51.64%), Postives = 144/213 (67.61%), Query Frame = -2
Query:  162 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLK-TKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRN--QDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSV 791
            CP  VSCADI+AL  RD+V         W V TGRRDG +S   EA   +P P +NF+ L++ F ++GL +KDLV+LSG HTIGVSHC+  + RLYNF+    QDPSLD +YAA LK  KCKSL D +T  E+DPGS R FD  YY ++++ +GLFQSD+AL TN     ++ +L N  + KFF  FA+SM++MG + V TG+ G IR +CSV
Sbjct:  116 CPKTVSCADIIALTARDAVVATGGPS--WSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCSV 326          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.933e-50
Identity = 103/217 (47.47%), Postives = 138/217 (63.59%), Query Frame = -2
Query:  156 RCPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMELRNQDKFFT----EFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 794
            +CP ++SCAD++AL  RD+V+        W V  GRRDG +S   +A L LPSPFA+   LKKNF +KGL  KDLVVLSGGHTIG+S C   ++RLYNFTG GD DPS++P Y   LK KC    D  T+  +DPGS   FD+HY+ ++ + KGLF SD+ LL +   +N V         F+    +F+ SM ++G + +LTG  GEIRK+C+  N
Sbjct:  112 KCPNLISCADVLALVARDAVAVI--GGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELKRKCPP-TDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 9.382e-44
Identity = 99/215 (46.05%), Postives = 131/215 (60.93%), Query Frame = -2
Query:  153 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKC-KSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTN-KGARNIVMELRNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVINN 791
            C G+VSCADIVA A RDSV         ++V  GRRDG +S+A+EA   LP P     +L + F++KGLT  ++V LSG HTIG SHC+ FSNRLYNF G   QDP+LDP+YAA LKT+C +   +T     ++P S    D  YY  ++ N+GLF SD  LLT+   A  +     N   +  +FA +M +MG + VL G  G+IR  C VIN+
Sbjct:  150 CKGVVSCADIVAFAARDSVEITGGLG--YDVPAGRRDGRISLASEASTNLPPPTFTVDQLTQFFSNKGLTQDEMVTLSGAHTIGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKTQCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQNAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVINS 362          
BLAST of CF835800 vs. ExPASy Swiss-Prot
Match: PER71_ARATH (Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=1 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.355e-42
Identity = 97/213 (45.54%), Postives = 133/213 (62.44%), Query Frame = -2
Query:  156 CPGIVSCADIVALATRDSVSFQFQKPDLWEVLTGRRDGSVSIAAEADLLLPSPFANFSELKKNFNDKGLTVKDLVVLSGGHTIGVSHCTFFSNRLYNFTGNGDQDPSLDPRYAAFLKTKCKSLADTTTTAELDPGSFRKFDSHYYDILIENKGLFQSDAALLTNKGARNIVMEL-RNQDKFFTEFAQSMKRMGAMNVLTGTQGEIRKKCSVIN 791
            CPG+VSCADI+ALA RD+V     +   W+V TGRRDG VS+A+ A+ L P P  + +  ++ F+  GL  +DLVVL GGHTIG + C  F NRL+N TG    DP++DP + A L+T+C    D +   +LD GS   +D+ YY+ L   +G+ QSD  L T+   R IV +L   +  F  EFA+SM RM  + V+TG  GEIR+ CS +N
Sbjct:  120 CPGVVSCADILALAARDTVILT--QGTGWQVPTGRRDGRVSLASNANNL-PGPRDSVAVQQQKFSALGLNTRDLVVLVGGHTIGTAGCGVFRNRLFNTTGQ-TADPTIDPTFLAQLQTQCPQNGDGSVRVDLDTGSGSTWDTSYYNNLSRGRGVLQSDQVLWTDPATRPIVQQLMAPRSTFNVEFARSMVRMSNIGVVTGANGEIRRVCSAVN 328          
The following BLAST results are available for this feature:
BLAST of CF835800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER56_ARATH2.300e-5855.14Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER39_ARATH3.923e-5854.84Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER3_ARATH6.692e-5853.67Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER27_ARATH3.672e-5654.67Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER1_ORYSJ3.109e-5554.13Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER24_ARATH1.706e-5352.75Peroxidase 24 OS=Arabidopsis thaliana GN=PER24 PE=... [more]
PER30_ARATH3.800e-5351.64Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER1_ARATH3.933e-5047.47Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER5_VITVI9.382e-4446.05Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER71_ARATH1.355e-4245.54Peroxidase 71 OS=Arabidopsis thaliana GN=PER71 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_01O14_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa01O14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835800 ID=CF835800; Name=CF835800; organism=Citrus sinensis; type=EST; length=798bp
TTTTTTTTTTTTTTTTTGCACAAACACACCCACATCCTTAACTTTTTCCG
TGGTACAATTATCAACAGATCTTAACAAACCCCTAAGCCCAGCAGCAGAC
TAAATTGGCAATTACATTGACATCAGATAGATGAATGCAACAAACTATCT
GGATTATTAATAACACTGCACTTCTTTCGAATCTCCCCTTGAGTGCCAGT
GAGAACATTCATAGCTCCCATTCTCTTCATTGACTGAGCAAACTCGGTGA
AGAACTTATCTTGGTTTCTCAACTCCATGACAATGTTTCTTGCTCCCTTA
TTGGTTAAAAGAGCAGCATCAGATTGGAATAGACCCTTGTTCTCGATAAG
AATATCATAGTAATGGCTGTCGAATTTTCGAAAACTCCCCGGGTCCAATT
CGGCAGTAGTCGTTGTGTCGGCAAGGCTCTTGCATTTGGTTTTTAAGAAT
GCAGCGTATCGTGGGTCCAATGAAGGATCTTGATCTCCATTTCCTGTGAA
ATTGTAGAGCCTGTTGCTGAAGAAGGTGCAGTGCGAAACTCCGATTGTGT
GGCCACCTGAAAGGACTACAAGATCTTTGACAGTGAGACCTTTGTCGTTA
AAATTTTTCTTGAGTTCACTGAAGTTGGCAAAAGGTGAAGGAAGCAGCAG
ATCGGCCTCAGCAGCTATGGACACACTGCCATCTCTTCTACCGGTGAGCA
CTTCCCACAGGTCCGGTTTTTGAAATTGGAATGAAACAGAATCCCTTGTA
GCCAAAGCTACGATATCGGCACAAGAAACAATTCCTGGACACCTGCTC
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