CF835802
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ANL2_ARATH (Homeobox-leucine zipper protein ANTHOCYANINLESS 2 OS=Arabidopsis thaliana GN=ANL2 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.151e-28 Identity = 71/101 (70.30%), Postives = 76/101 (75.25%), Query Frame = -3 Query: 510 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 812 IPAMHVVMNGGDS+YVALLPSGFA++PDG G SLLTVAFQILVN+LPTAKLTVESVETVNNLISCTVQKI+AALQCES Sbjct: 710 IPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGG--------GSGDGDQRPVGGGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAALQCES 802
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: HDG1_ARATH (Homeobox-leucine zipper protein HDG1 OS=Arabidopsis thaliana GN=HDG1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.245e-27 Identity = 69/101 (68.32%), Postives = 72/101 (71.29%), Query Frame = -3 Query: 510 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 812 IPAM VMNGGDSAYVALLPSGFAI+P+G A LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL C+S Sbjct: 708 IPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEERNSIGNGGCMEEGGS-LLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCDS 807
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC5_ORYSJ (Homeobox-leucine zipper protein ROC5 OS=Oryza sativa subsp. japonica GN=ROC5 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.116e-26 Identity = 65/101 (64.36%), Postives = 72/101 (71.29%), Query Frame = -3 Query: 510 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 812 IPAM +VMNGGDS YVALLPSGFAI+PDGP SLLTVAFQILVN+ PTAKLTVESVETVNNLISCT++KIK ALQC++ Sbjct: 718 IPAMQLVMNGGDSTYVALLPSGFAILPDGP--------------RIGATGYETGGSLLTVAFQILVNNQPTAKLTVESVETVNNLISCTIKKIKTALQCDA 804
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC6_ORYSJ (Homeobox-leucine zipper protein ROC6 OS=Oryza sativa subsp. japonica GN=ROC6 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 3.242e-23 Identity = 61/104 (58.65%), Postives = 73/104 (70.19%), Query Frame = -3 Query: 519 IPAMHVVMNGGDSAYVALLPSGFAIVPDG------PDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 812 + +MHVVMNGGDSAYV+LLPSGFAI+PDG P + SL+TVAFQILVN+LPTAKLTVESV+TV+NL+SCT+QKIK+ALQ Sbjct: 763 VQSMHVVMNGGDSAYVSLLPSGFAILPDGHNNGASPSPAEVGSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAKLTVESVDTVSNLLSCTIQKIKSALQ 866
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: HDG7_ARATH (Homeobox-leucine zipper protein HDG7 OS=Arabidopsis thaliana GN=HDG7 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.232e-22 Identity = 59/98 (60.20%), Postives = 68/98 (69.39%), Query Frame = -3 Query: 519 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQ 812 IP+M+ VM+GGDSAYVALLPSGF+I+PDG S LLTV FQILVNSLPTAKL VESVETVNNLI+CT+ KI+AAL+ Sbjct: 587 IPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSSD-----QFDTDGGLVNQESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAALR 679
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC4_ORYSJ (Homeobox-leucine zipper protein ROC4 OS=Oryza sativa subsp. japonica GN=ROC4 PE=2 SV=2) HSP 1 Score: 106.686 bits (265), Expect = 1.609e-22 Identity = 60/100 (60.00%), Postives = 69/100 (69.00%), Query Frame = -3 Query: 513 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCE 812 IPAMH+VM+GGDS+ VALLPSGFAI+P GP SLLTVAFQIL NS P+AKLTVESVETV+NLISCT++KIK AL C+ Sbjct: 728 IPAMHLVMSGGDSSCVALLPSGFAILPAGPS---------------IGADHKMGGSLLTVAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTALHCD 812
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSJ (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. japonica GN=ROC7 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.761e-21 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = -3 Query: 492 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES*YDNGV 812 + AM+VV+NGGD YVALLPSGFAI+PDGPD G SLLTVAFQILV+S+PTAKL++ SV TVN+LI+CTV++IKAA+ DNGV Sbjct: 661 VVAMNVVLNGGDPDYVALLPSGFAILPDGPDGGG--------------------GSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAIT----GDNGV 743
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC7_ORYSI (Homeobox-leucine zipper protein ROC7 OS=Oryza sativa subsp. indica GN=ROC7 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 6.761e-21 Identity = 60/107 (56.07%), Postives = 73/107 (68.22%), Query Frame = -3 Query: 492 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES*YDNGV 812 + AM+VV+NGGD YVALLPSGFAI+PDGPD G SLLTVAFQILV+S+PTAKL++ SV TVN+LI+CTV++IKAA+ DNGV Sbjct: 661 VVAMNVVLNGGDPDYVALLPSGFAILPDGPDGGG--------------------GSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAIT----GDNGV 743
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: HDG2_ARATH (Homeobox-leucine zipper protein HDG2 OS=Arabidopsis thaliana GN=HDG2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.830e-21 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = -3 Query: 510 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 812 I AM++V+NGGD YVALLPSGFAI+PDG + G SLLTVAFQILV+S+PTAKL++ SV TVNNLI+CTV++IKA++ CE+ Sbjct: 634 IVAMNIVLNGGDPDYVALLPSGFAILPDGNANSGA--------------PGGDGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASMSCET 720
BLAST of CF835802 vs. ExPASy Swiss-Prot
Match: ROC2_ORYSJ (Homeobox-leucine zipper protein ROC2 OS=Oryza sativa subsp. japonica GN=ROC2 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 4.382e-20 Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = -3 Query: 510 IPAMHVVMNGGDSAYVALLPSGFAIVPDGPDSRGPLAXXXXXXXXXXXXXXXXXXSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALQCES 812 + AM+VV+NGGD YVALLPSGFAI+PDGP G SLLTVAFQILV+S+PTAKL++ SV TVN+LI+CTV++IKAA+ ES Sbjct: 689 VVAMNVVLNGGDPDYVALLPSGFAILPDGPAHDG--------GDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGES 781 The following BLAST results are available for this feature:
BLAST of CF835802 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835802 ID=CF835802; Name=CF835802; organism=Citrus sinensis; type=EST; length=814bpback to top |