CF835825
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835825 vs. ExPASy Swiss-Prot
Match: PTPM1_MOUSE (Protein-tyrosine phosphatase mitochondrial 1 OS=Mus musculus GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.350e-25 Identity = 71/190 (37.37%), Postives = 103/190 (54.21%), Query Frame = 3 Query: 120 AKRALVGAG-ARILFYPTLLYNVFRNKIQ--AEFRWWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKAVQEFSQRKLAITA 668 A A + AG AR+LFYPTLLY VFR +++ A W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L + T D P+ ++ + V F G+ YVHCKAGR RS T+V YL++ + +P A+E + R + + PSQ + ++EF + A A Sbjct: 2 AASAWLEAGLARVLFYPTLLYTVFRGRVRGPAHRDWYHRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEVLKEFHKEITARAA 191
BLAST of CF835825 vs. ExPASy Swiss-Prot
Match: PTPM1_RAT (Protein-tyrosine phosphatase mitochondrial 1 OS=Rattus norvegicus GN=Ptpmt1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.928e-25 Identity = 72/190 (37.89%), Postives = 102/190 (53.68%), Query Frame = 3 Query: 120 AKRALVGAG-ARILFYPTLLYNVFRNKI--QAEFRWWDEVDQFLLLGAVPFPKDVPRLK-QLGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKAVQEFSQRKLAITA 668 A A + AG AR+LFYPTLLY VFR ++ A W+ +D +LLGA+P RL V GVIT+NE YET S + G++ L + T D P+ ++ R V F G+ YVHCKAGR RS T+V YL++ + +P A+E + R + + PSQ + ++EF + A A Sbjct: 2 AASAWLEAGLARVLFYPTLLYTVFRGRVGGPAHRDWYHRIDHTVLLGALPLRSMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKNVGVEQLRLSTVDMTGVPTLANLHRGVQFALKYQSLGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEAIEAIAKIRSHISIRPSQLEILKEFHKEIAARAA 191
BLAST of CF835825 vs. ExPASy Swiss-Prot
Match: PTPM1_HUMAN (Protein-tyrosine phosphatase mitochondrial 1 OS=Homo sapiens GN=PTPMT1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.650e-23 Identity = 68/184 (36.96%), Postives = 101/184 (54.89%), Query Frame = 3 Query: 120 AKRALVGAG-ARILFYPTLLYNVFRNKI--QAEFRWWDEVDQFLLLGAVPFPKDVPRLKQ-LGVGGVITLNEPYETLV---PSSLYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIHSNSCAGKTTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKAVQEFSQR 650 A AL+ AG AR+LFYPTLLY +FR K+ +A W+ +D +LLGA+P +L Q V GVIT+NE YET S + G++ L + T D P+ ++++ V F G+ YVHCKAGR RS T+V YL++ +P A+ + R + + P Q ++EF ++ Sbjct: 2 AATALLEAGLARVLFYPTLLYTLFRGKVPGRAHRDWYHRIDPTVLLGALPLRSLTRQLVQDENVRGVITMNEEYETRFLCNSSQEWKRLGVEQLRLSTVDMTGIPTLDNLQKGVQFALKYQSLGQCVYVHCKAGRSRSATMVAAYLIQVHKWSPEEAVRAIAKIRSYIHIRPGQLDVLKEFHKQ 185
BLAST of CF835825 vs. ExPASy Swiss-Prot
Match: PTPM1_DROME (Protein-tyrosine phosphatase mitochondrial 1-like protein OS=Drosophila melanogaster GN=Plip PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 9.055e-22 Identity = 66/184 (35.87%), Postives = 100/184 (54.35%), Query Frame = 3 Query: 147 ARILFYPTLLYNVFRNKIQAEFRWWDEVDQFLLLGAVPFPKDVPRL-KQLGVGGVITLNEPYETLVPSS---LYHAHGIDHLVIPTRDYLFAPSFVDIRRAVDFIH------------SNSCAGK---TTYVHCKAGRGRSTTIVLCYLVEYKHMAPAAALEYVRCRRPRVLLAPSQWKAVQEF 641 AR+ FYPTLLYNV K A W+D +D+ ++LGA+PF L ++ + V+++NE YE S+ + GI+ L + T D +P+ + R V+FI+ S+S + + YVHCKAGR RS T+V CYL+ P A++++R RP +LL QW A++ F Sbjct: 9 ARVSFYPTLLYNVLMEKASAR-NWYDRIDEHVILGALPFRSQANDLIEKENMKAVVSMNEDYELTAFSNNTEKWRKLGIEFLQLATTDIFESPNQEKLFRGVEFINKFLPLKQRIGGLSSSYQPENVGSVYVHCKAGRTRSATLVGCYLMMKNGWTPDQAVDHMRKCRPHILLHTKQWDALRLF 191 The following BLAST results are available for this feature:
BLAST of CF835825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835825 ID=CF835825; Name=CF835825; organism=Citrus sinensis; type=EST; length=748bpback to top |