CF835856
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 6.390e-80 Identity = 144/230 (62.61%), Postives = 164/230 (71.30%), Query Frame = 3 Query: 6 MARRYDSNPF-DEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 MA RYD NPF +EEEVNPF+ N+ VPPA+NSRLSPLP EP GF++ R I + +RREQD++RKE+AAARAGIV+E KNWPPFFP+IHHDIANEIP+HLQRLQYV FATYLGL LCL WNI+AVTTAWIKGEGV IW LA+IYFIAGVPG YVLWYRPLYRAF T+SA+ FGWFFLFY+LHI FC+F Sbjct: 1 MANRYDPNPFAEEEEVNPFA----------------------NARGVPPASNSRLSPLPPEPVGFDYGRTVDIPLDRAGTQDLKKKEKELQAKEAELKRREQDLKRKEDAAARAGIVIEVKNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAVTTAWIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVF 208
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 1.924e-76 Identity = 142/228 (62.28%), Postives = 159/228 (69.74%), Query Frame = 3 Query: 6 MARRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCI 689 MA RYD NPFDEE+VNPFS+P S ATNSR +PL + A +N+ +DIP R+REQ+VRRKEEA ARAGIV+EEKNWPPFFPIIHHDI NEIPIHL+ LQYVAF + LGL LCL WN+V+VT AWIKGEGVKIWFLAIIYFIAGVPGAY LWYRPLYRAF T+SA+KFGWFF+FYLLHIGFCI Sbjct: 1 MAGRYDPNPFDEEQVNPFSNPR----------------------SAASATNSRPAPLNPDRADYNYGFGPTVDIPLDTSTDGKKKERDLQAKEAELRKREQEVRRKEEAIARAGIVIEEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSVTAAWIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCI 206
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.629e-75 Identity = 137/229 (59.83%), Postives = 160/229 (69.87%), Query Frame = 3 Query: 6 MARRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 MA RYD NPFDE++VNPF+ SVPPA+NSR+ PLPHEP GF +R A +DIP +RE ++RR+EEAA+RAGIV+EEKNWPPFFPIIHHDI+NEIPIHLQR+QY+AF++ LGL CL WNI+A T AWIKG GV IW LAIIYFI+GVPGAYVLWYRPLY A TESA+KFGWFFLFYL+HI FCI+ Sbjct: 1 MAGRYDRNPFDEDDVNPFA-----------------------GGSVPPASNSRMPPLPHEP-GFYNDRGATVDIPLDSTKDMKKKEKELQAKEAELNKRESELRRREEAASRAGIVIEEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIATTAAWIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIW 205
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM5_ARATH (Secretory carrier-associated membrane protein 5 OS=Arabidopsis thaliana GN=SCAMP5 PE=2 SV=2) HSP 1 Score: 278.87 bits (712), Expect = 1.801e-74 Identity = 140/232 (60.34%), Postives = 161/232 (69.40%), Query Frame = 3 Query: 6 MARRYDSNPFDEE-EVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFER--DAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 M RYD N FDE+ EVNPF++P SVP A+NSRLSPLP EPAGF + R D P+D P RRREQD++RK++AAARAGIV+E KNWP FFP+IHHDIANEI + LQRLQY+AFATYLGL L L WNI+AVTTAWIKGEGV IW LA+IYFI+GVPG YVLWYRPLYRAF ++SA FGWFFLFY+LHI FC+F Sbjct: 1 MGGRYDRNTFDEQDEVNPFANPG----------------------SVPAASNSRLSPLPPEPAGFGYGRTVDIPLDRPGSGAQDLKKKEKELQAKEADLRRREQDLKRKQDAAARAGIVIEAKNWPTFFPLIHHDIANEILVRLQRLQYIAFATYLGLVLALFWNIIAVTTAWIKGEGVTIWLLAVIYFISGVPGGYVLWYRPLYRAFRSDSAFNFGWFFLFYMLHILFCLF 210
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 7.566e-73 Identity = 137/230 (59.57%), Postives = 159/230 (69.13%), Query Frame = 3 Query: 15 RYDSNPFDE---EEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSA-SVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 RYD NPF+E +EVNPF+D A + TT S S PPAT+ LSPLP EPA F + P+DIP RRE++++R+EEAAARAGIVLE+KNWPPFFPIIH+DI NEIP+HLQR QYVAFA+ LGL LCL WNI+ VT AWIKGEG KIWFLA+IYFI G PGAY LWYRPLYRA ESA+KFGWFFLFYL+HI FC++ Sbjct: 6 RYD-NPFEEGGGDEVNPFADKASKGGSAGQSSYSGGAFYTTQSRPSAPPATH--LSPLPPEPADFYNDFSTPVDIPMDTSKDMKTREKELLAKEAELNRREKEIKRREEAAARAGIVLEDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVY 232
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.291e-72 Identity = 135/230 (58.70%), Postives = 162/230 (70.43%), Query Frame = 3 Query: 6 MARRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 MA RYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A T+SA+KFG FFL YL HI FC+F Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSVSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVF 225
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSI (Putative secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. indica GN=SCAMP1 PE=3 SV=1) HSP 1 Score: 272.707 bits (696), Expect = 1.291e-72 Identity = 135/230 (58.70%), Postives = 162/230 (70.43%), Query Frame = 3 Query: 6 MARRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPP-ATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 MA RYDSNPF+E++VNPFS+ A R N +VP ++NSRLSPLP EPA F A +DIP +RE++++R+EEAAARAGIV+EEKNWPPF P+IHHDI NEIP HLQR+QYVAFA++LGL CL WN++AVT+AW+KGEGVKIW LAIIYFI+GVPGAYVLWYRPLY A T+SA+KFG FFL YL HI FC+F Sbjct: 1 MAGRYDSNPFEEDDVNPFSEQA-RGKAGGQPSYGGGAFYMPNPRNVPSMSSNSRLSPLPPEPAAFG----ATVDIPLDSSKDLKNREKELQAREAELNKREKELKRREEAAARAGIVIEEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAVTSAWVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVF 225
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.179e-71 Identity = 132/226 (58.41%), Postives = 158/226 (69.91%), Query Frame = 3 Query: 15 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 RY S+ FD+ E+NPF++P SVP AT S+LSPLP EP ++R A +DIP +RREQ+++RKE+A A+AGIV+EEKNWPPFFP+IHHDI+NEIPIHLQR+QYVAF + LGL +CLLWNIVAVTTAWIKGEG IWFLAIIYFI+GVPGAYV+WYRPLYRA T+SA+KFGWFF YL HI FC+F Sbjct: 3 RYQSHSFDDGEINPFANPT----------------------SVPAAT-SKLSPLPPEP----YDRGATMDIPLDSGKDLKAKEKELREKEAELKRREQEIKRKEDAIAQAGIVIEEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAVTTAWIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVF 201
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1) HSP 1 Score: 261.151 bits (666), Expect = 3.886e-69 Identity = 126/229 (55.02%), Postives = 157/229 (68.56%), Query Frame = 3 Query: 6 MARRYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 MA ++ N F++++VNPF+ SVPPA NSRL PL HEPA F +DIP +RE++++RKEEAAA+AGIV+E+KNWPPFFP+IHH+I+NEIPIHLQR+QY+AF+++LGL CL WNI+A TTAW+KGEGV IW LAIIYFI+GVPGAYVLWYRPLY A TESA+KFGWFFLFYL+HI FC++ Sbjct: 1 MAGKHGRNGFEDDDVNPFA-----------------------GGSVPPANNSRLPPLSHEPADFY-----NVDIPLDSSKDLKKKEKELQAMEAELNKRERELKRKEEAAAQAGIVIEDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIATTTAWVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVW 201
BLAST of CF835856 vs. ExPASy Swiss-Prot
Match: SCAM2_ARATH (Secretory carrier-associated membrane protein 2 OS=Arabidopsis thaliana GN=SCAMP2 PE=2 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 1.250e-67 Identity = 126/226 (55.75%), Postives = 151/226 (66.81%), Query Frame = 3 Query: 15 RYDSNPFDEEEVNPFSDPAVRXXXXXXXXXXXXXXXTTNSASVPPATNSRLSPLPHEPAGFNFERDAPIDIPXXXXXXXXXXXXXXXXXXXXXRRREQDVRRKEEAAARAGIVLEEKNWPPFFPIIHHDIANEIPIHLQRLQYVAFATYLGLFLCLLWNIVAVTTAWIKGEGVKIWFLAIIYFIAGVPGAYVLWYRPLYRAFXTESAMKFGWFFLFYLLHIGFCIF 692 R+D NPF +EE+NPF+ N SVPPA+NS L PLP EP ++R A +DIP +R+EQ+++R+E+A AR G+V+EEKNWP FFP+IHHDI NEIPIHLQ++QYVAF T LGL CLLWNIVAVT AWIKGEG IW L+IIYF+AGVPGAYVLWYRPLYRA T+SA+KFG FF FY+ HI FC F Sbjct: 3 RHDPNPFADEEINPFA----------------------NHTSVPPASNSYLKPLPPEP----YDRGATVDIPLDSGNDLRAKEMELQAKENELKRKEQELKRREDAIARTGVVIEEKNWPEFFPLIHHDIPNEIPIHLQKIQYVAFTTLLGLVGCLLWNIVAVTVAWIKGEGPTIWLLSIIYFLAGVPGAYVLWYRPLYRATRTDSALKFGAFFFFYVFHIAFCGF 202 The following BLAST results are available for this feature:
BLAST of CF835856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835856 ID=CF835856; Name=CF835856; organism=Citrus sinensis; type=EST; length=692bpback to top |