CF835865

Overview
NameCF835865
Unique NameCF835865
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER4_VITVI (Peroxidase 4 OS=Vitis vinifera GN=GSVIVT00023967001 PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 2.126e-82
Identity = 154/200 (77.00%), Postives = 174/200 (87.00%), Query Frame = 2
Query:   53 SFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            S S  +V +ALG L +F G SSAQLSTNFYSKTCPK+ +TVKS VQSAVSKERRMGASLLRL FHDCFVNGCD S+LLDDTSSFTGE+T+ PN NS RG  V+D+IKS+VE VCPGVVSCADI+AIAAR SV ILGGP W+VKLGRRDSKTASL+ AN+  IPPPTS+LSNLI++FQA+GLS +DMVALS AHTIGQARC
Sbjct:    3 SSSFSIVVVALGVLALFAGSSSAQLSTNFYSKTCPKVFDTVKSGVQSAVSKERRMGASLLRLFFHDCFVNGCDASVLLDDTSSFTGEQTAVPNKNSIRGLNVIDNIKSQVESVCPGVVSCADIIAIAARDSVVILGGPDWDVKLGRRDSKTASLSGANNN-IPPPTSSLSNLISKFQAQGLSTRDMVALSGAHTIGQARC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER67_ARATH (Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=2 SV=1)

HSP 1 Score: 274.633 bits (701), Expect = 3.077e-73
Identity = 132/197 (67.01%), Postives = 162/197 (82.23%), Query Frame = 2
Query:   65 LMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            ++  + L  +++   +S AQL+ +FY ++CP L   V+  V+ AV++E RMGASLLRL FHDCFVNGCDGS+LLDDT SF GEKTSGP+ NS RGFEV+D IK KVEK+CPG+VSCADILAI AR SV +LGGP W+VKLGRRDS TA+ AAANSGVIPPP +TLSNLINRF+A+GLS +DMVALS AHTIG+A+C+
Sbjct:    1 MLKVVLLMMIMMLASQSEAQLNRDFYKESCPSLFLVVRRVVKRAVAREPRMGASLLRLFFHDCFVNGCDGSLLLDDTPSFLGEKTSGPSNNSVRGFEVIDKIKFKVEKMCPGIVSCADILAITARDSVLLLGGPGWSVKLGRRDSTTANFAAANSGVIPPPITTLSNLINRFKAQGLSTRDMVALSGAHTIGRAQCV 197          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER68_ARATH (Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.019e-73
Identity = 138/209 (66.03%), Postives = 163/209 (77.99%), Query Frame = 2
Query:   29 QKEQKMAFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            Q  Q+ AF        + L F+V+   ++ AQL T+FYS +CP LL TV+  VQ  V+KERR+ ASLLRL FHDCFVNGCD SILLDDT SF GEKT+GPN NS RG+EV+D IKS+VE++CPGVVSCADILAI AR SV ++GG  W+VKLGRRDS TAS + ANSGV+PPPTSTL NLIN F+A GLS +DMVALS AHTIGQARC+
Sbjct:    6 QSRQRAAF--------VVLLFIVMLGSQAQAQLRTDFYSDSCPSLLPTVRRVVQREVAKERRIAASLLRLFFHDCFVNGCDASILLDDTRSFLGEKTAGPNNNSVRGYEVIDAIKSRVERLCPGVVSCADILAITARDSVLLMGGRGWSVKLGRRDSITASFSTANSGVLPPPTSTLDNLINLFRANGLSPRDMVALSGAHTIGQARCV 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.205e-71
Identity = 134/178 (75.28%), Postives = 154/178 (86.52%), Query Frame = 2
Query:  119 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            AQL+TNFYS +CP LL+TV++AV+SAV+ E RMGAS+LRL FHDCFVNGCDGSILLDDTSSFTGE+ + PN NSARGF V+D+IKS VEK CPGVVSCADILAIAAR SV  LGGP+WNVK+GRRD++TAS AAANS  IP PTS+LS LI+ F A GLS +DMVALS AHTIGQ+RC
Sbjct:   28 AQLTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAAPNRNSARGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSN-IPAPTSSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRC 204          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERP7_BRARA (Peroxidase P7 OS=Brassica rapa PE=1 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 3.761e-71
Identity = 134/178 (75.28%), Postives = 153/178 (85.96%), Query Frame = 2
Query:  122 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCI 655
            QL+TNFYS +CP LL+TVKS V+SAVS + RMGAS+LRL FHDCFVNGCDGSILLDDTSSFTGE+ +GPN NSARGF V++DIKS VEK CPGVVSCADILAIAAR SV  LGGP+WNVK+GRRD+KTAS AAANS  IP P+ +LS LI+ F A GLS +DMVALS AHTIGQ+RC+
Sbjct:    1 QLTTNFYSTSCPNLLSTVKSGVKSAVSSQPRMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQNAGPNRNSARGFTVINDIKSAVEKACPGVVSCADILAIAARDSVVQLGGPNWNVKVGRRDAKTASQAAANSN-IPAPSMSLSQLISSFSAVGLSTRDMVALSGAHTIGQSRCV 177          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER1_ARAHY (Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 PE=1 SV=2)

HSP 1 Score: 259.225 bits (661), Expect = 1.338e-68
Identity = 129/184 (70.11%), Postives = 149/184 (80.98%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARCIA 658
            G  SAQLS+NFY+  CP  L+T+KSAV SAV+KE RMGASLLRLHFHDCFV GCD S+LLDDTS+FTGEKT+GPN NS RGFEV+D IKS+VE +CPGVVSCADILA+AAR SV  LGG SWNV LGRRDS TASL++ANS  +P P   LS LI+ F  KG + K++V LS AHTIGQA+C A
Sbjct:   18 GLGSAQLSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQGCDASVLLDDTSNFTGEKTAGPNANSIRGFEVIDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSD-LPAPFFNLSGLISAFSNKGFTTKELVTLSGAHTIGQAQCTA 200          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER70_MAIZE (Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 8.974e-65
Identity = 128/202 (63.37%), Postives = 156/202 (77.23%), Query Frame = 2
Query:   47 AFSFSSLMVTLALGFLVVFTGKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            +F+  S+MV L L    V    +SAQLS  FYS++CP+ L T+K+AV +AV++E RMGASLLRLHFHDCFV GCDGS+LL+DT++FTGE+T+ PN+ S RGF VVD+IK++VE VCPGVVSCADILA+AAR SV  LGGPSW V LGRRDS TASLA ANS  +P P+  L+NL   F  K LS  D+VALS AHTIG A+C
Sbjct:    5 SFTSLSVMVLLCLAAAAV----ASAQLSPTFYSRSCPRALATIKAAVTAAVAQEARMGASLLRLHFHDCFVQGCDGSVLLNDTATFTGEQTANPNVGSIRGFGVVDNIKAQVEAVCPGVVSCADILAVAARDSVVALGGPSWRVLLGRRDSTTASLALANSD-LPAPSLDLANLTAAFAKKRLSRTDLVALSGAHTIGLAQC 201          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 6.019e-61
Identity = 113/182 (62.09%), Postives = 138/182 (75.82%), Query Frame = 2
Query:  107 GKSSAQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            G SSAQL+  FYS TCP     V+S +Q A+  + R+GASL+RLHFHDCFVNGCD SILLDDT S   EK +GPN+NSARGF VVD+IK+ +E  CPGVVSC+D+LA+A+  SV++ GGPSW V LGRRDS TA+LA ANS  IP P  +LSN+  +F A GL+  D+VALS AHT G+ARC
Sbjct:   26 GTSSAQLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVNGCDASILLDDTGSIQSEKNAGPNVNSARGFNVVDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSS-IPSPIESLSNITFKFSAVGLNTNDLVALSGAHTFGRARC 206          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERX_NICSY (Lignin-forming anionic peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.751e-60
Identity = 112/178 (62.92%), Postives = 137/178 (76.97%), Query Frame = 2
Query:  119 AQLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            AQLS  FY  TCP  LNT++++V+ A+S ERRM ASL+RLHFHDCFV GCD SILLD+T S   EKT+ PN+ SARGF +++D K +VEK+CPGVVSCADIL +AAR + A +GGPSW VKLGRRDS TAS   A +  +P P   L+ LI+ F +KGLS +DMVALS AHTIGQA+C
Sbjct:   27 AQLSATFYDNTCPNALNTIRTSVRQAISSERRMAASLIRLHFHDCFVQGCDASILLDETPSIESEKTALPNLGSARGFGIIEDAKREVEKICPGVVSCADILTVAARDASAAVGGPSWTVKLGRRDSTTASKTLAETD-LPGPFDPLNRLISSFASKGLSTRDMVALSGAHTIGQAQC 203          
BLAST of CF835865 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.367e-57
Identity = 108/177 (61.02%), Postives = 132/177 (74.58%), Query Frame = 2
Query:  122 QLSTNFYSKTCPKLLNTVKSAVQSAVSKERRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKTSGPNINSARGFEVVDDIKSKVEKVCPGVVSCADILAIAARHSVAILGGPSWNVKLGRRDSKTASLAAANSGVIPPPTSTLSNLINRFQAKGLSAKDMVALSXAHTIGQARC 652
            QL+  FYS TCP     V+S +Q A   + R+GASL+RLHFHDCFV+GCD SILLDD+ S   EK +GPN NSARGF VVD+IK+ +E  CPGVVSC+DILA+A+  SV++ GGPSW V LGRRDS TA+LA ANS  IP P   LSN+ ++F A GL+  D+VALS AHT G+ARC
Sbjct:    1 QLNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCPGVVSCSDILALASEASVSLTGGPSWTVLLGRRDSLTANLAGANS-AIPSPFEGLSNITSKFSAVGLNTNDLVALSGAHTFGRARC 176          
The following BLAST results are available for this feature:
BLAST of CF835865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER4_VITVI2.126e-8277.00Peroxidase 4 OS=Vitis vinifera GN=GSVIVT0002396700... [more]
PER67_ARATH3.077e-7367.01Peroxidase 67 OS=Arabidopsis thaliana GN=PER67 PE=... [more]
PER68_ARATH4.019e-7366.03Peroxidase 68 OS=Arabidopsis thaliana GN=PER68 PE=... [more]
PER52_ARATH2.205e-7175.28Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PERP7_BRARA3.761e-7175.28Peroxidase P7 OS=Brassica rapa PE=1 SV=3[more]
PER1_ARAHY1.338e-6870.11Cationic peroxidase 1 OS=Arachis hypogaea GN=PNC1 ... [more]
PER70_MAIZE8.974e-6563.37Peroxidase 70 OS=Zea mays GN=PER70 PE=1 SV=1[more]
PER53_ARATH6.019e-6162.09Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PERX_NICSY1.751e-6062.92Lignin-forming anionic peroxidase OS=Nicotiana syl... [more]
PERA2_ARMRU2.367e-5761.02Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835865 ID=CF835865; Name=CF835865; organism=Citrus sinensis; type=EST; length=660bp
CTTCACACTGTTAATTAAATTTAATTAACAAAAGGAGCAAAAAATGGCTT
TTTCTTTTTCTTCTTTAATGGTGACTTTGGCATTAGGGTTTCTTGTGGTT
TTCACAGGCAAATCAAGTGCTCAACTCTCTACTAATTTCTATTCAAAAAC
TTGTCCAAAACTGTTGAATACGGTTAAATCTGCTGTTCAATCAGCAGTTT
CAAAAGAGCGTCGGATGGGCGCTTCTCTCCTTCGCTTACACTTTCATGAC
TGTTTCGTCAACGGGTGTGATGGGTCAATTCTACTAGATGACACGTCATC
TTTCACTGGTGAGAAGACTTCAGGACCAAATATCAATTCAGCAAGAGGAT
TTGAAGTTGTTGATGATATAAAATCAAAGGTAGAGAAAGTTTGCCCAGGA
GTCGTTTCATGCGCTGATATTTTAGCCATTGCTGCTCGGCATTCAGTTGC
AATTCTTGGAGGGCCAAGTTGGAATGTTAAACTTGGAAGAAGGGACTCCA
AAACAGCTAGCTTAGCTGCTGCTAATAGTGGTGTCATTCCTCCTCCTACC
TCCACTCTAAGCAACCTCATCAATAGATTCCAGGCTAAAGGTCTCTCTGC
CAAGGACATGGTTGCTTTATCCNGAGCGCATACAATTGGGCAAGCAAGGT
GTATAGCCTT
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