CF835867

Overview
NameCF835867
Unique NameCF835867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1876 contig Csv1_Contig1876:25..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA8_ARATH (Purple acid phosphatase 8 OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.289e-81
Identity = 140/198 (70.71%), Postives = 164/198 (82.83%), Query Frame = 3
Query:  141 CPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSS 734
            C S+AELP F  P +PDGSLSFLVVGDWGRRG+YNQ++VA QMG +G+ L IDF+ISTGDNFYDDG+    D  F +SF NIYTA SL K WYNVLGNHDYRG+V AQLSP+LRD+D RW+CLRS++VNAEI +  FVDTTPFVD+YF +P+DHVYDW G+ PR  YL +LL DVD AL+ES AKWKIVVGHHTIKS+
Sbjct:   26 CNSTAELPRFVQPPEPDGSLSFLVVGDWGRRGSYNQSQVALQMGKIGKDLNIDFLISTGDNFYDDGIISPYDSQFQDSFTNIYTATSLQKPWYNVLGNHDYRGNVYAQLSPILRDLDCRWICLRSYVVNAEIVDIFFVDTTPFVDRYFDEPKDHVYDWRGVLPRNKYLNSLLTDVDVALQESMAKWKIVVGHHTIKSA 223          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA3_ARATH (Purple acid phosphatase 3 OS=Arabidopsis thaliana GN=PAP3 PE=2 SV=1)

HSP 1 Score: 302.368 bits (773), Expect = 1.683e-81
Identity = 142/225 (63.11%), Postives = 181/225 (80.44%), Query Frame = 3
Query:   60 VAGLRNRAMSLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSS 734
            +A L+++ ++L   +  + ++ S +    S+AEL     P+K DG++SFLV+GDWGRRG+YNQ++VA QMG +GEKL IDF+ISTGDNFYD+GLT + D  F +SF NIYTAPSL K WY+VLGNHDYRGDV AQLSP+LR +D+RW+C+RSFIVNAEI +  FVDTTPFVDKYF  P  HVYDWSG+ PR++YL NLLK++D AL+ES AKWKIV+GHHTIKS+
Sbjct:   31 MATLKHKPVNLVFYVYNLIIIFSSH---SSTAELRRLLQPSKTDGTVSFLVIGDWGRRGSYNQSQVALQMGEIGEKLDIDFVISTGDNFYDNGLTSLHDPLFQDSFTNIYTAPSLQKPWYSVLGNHDYRGDVRAQLSPMLRALDNRWVCMRSFIVNAEIVDLFFVDTTPFVDKYFIQPNKHVYDWSGVLPRQTYLNNLLKELDVALRESVAKWKIVIGHHTIKSA 252          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA4_ARATH (Purple acid phosphatase 4 OS=Arabidopsis thaliana GN=PAP4 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.643e-78
Identity = 133/216 (61.57%), Postives = 168/216 (77.78%), Query Frame = 3
Query:   87 SLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSS 734
            SL++++T +     L +     AEL   +H   PDGS+SFLV+GDWGR G YNQ++VA QMG +GE++ I+F++STGDN YD+G+  +DD AF  SF NIYT+PSL K WY VLGNHDYRGDVEAQLSP+LR +DSRW+C+RSFIV+AEIAE  FVDTTPFVD YF  P+D  YDWSG+ PRKSYL  +L +++  L+ES+AKWKIVVGHH IKS+
Sbjct:    9 SLSIVMTLLICFLLLSLAPKLEAELATVQHAPNPDGSISFLVIGDWGRHGLYNQSQVALQMGRIGEEMDINFVVSTGDNIYDNGMKSIDDPAFQLSFSNIYTSPSLQKPWYLVLGNHDYRGDVEAQLSPILRSMDSRWICMRSFIVDAEIAELFFVDTTPFVDAYFLSPQDQTYDWSGVSPRKSYLQTILTELEMGLRESSAKWKIVVGHHAIKSA 224          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA17_ARATH (Purple acid phosphatase 17 OS=Arabidopsis thaliana GN=PAP17 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.292e-73
Identity = 128/220 (58.18%), Postives = 168/220 (76.36%), Query Frame = 3
Query:   72 RNRAMSLTLIITFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKS 731
            R   MS T  ++ +  + + +V   S+ EL  F  PAK DGS+SF+V+GDWGRRG++NQ+ VA+QMG +GEK+ +DF++STGDNFYD+GL    D  F +SF NIYTAPSL KQWY+VLGNHDYRGD EAQLS VLR+IDSRW+CLRSF+V+AE+ E  FVDTTPFV +Y+T+ + H YDW  +  R SY+  LL+D++ +LK S A+WKIVVGHH ++S
Sbjct:    5 RRSLMSATASLSLLLCIFTTFVVV-SNGELQRFIEPAKSDGSVSFIVIGDWGRRGSFNQSLVAYQMGKIGEKIDLDFVVSTGDNFYDNGLFSEHDPNFEQSFSNIYTAPSLQKQWYSVLGNHDYRGDAEAQLSSVLREIDSRWICLRSFVVDAELVEMFFVDTTPFVKEYYTEADGHSYDWRAVPSRNSYVKALLRDLEVSLKSSKARWKIVVGHHAMRS 223          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA7_ARATH (Purple acid phosphatase 7 OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.865e-72
Identity = 126/219 (57.53%), Postives = 163/219 (74.43%), Query Frame = 3
Query:   84 MSLTLIITFIALLGSLYVFCPSSAELPWFEHPAKP--DGSLSFLVVGDWGRRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAKQWYNVLGNHDYRGDVEAQLSPVLRDIDSRWLCLRSFIVNAEIAEFIFVDTTPFVDKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKSS 734
            M + +  + I +  S++    + ++L   +HP K   DGSLSFLV+GDWGR+G +NQ+ VAHQMG+VGEKL IDF+IS GDNFYDDGL GV+D +F  SF +IYT PSL KQWY+VLGNHDYRG+VEAQLS VL   D RW C RSF++++ + +F F DT PFV+KYFT+PEDH YDW  + PR  Y++NLL D+D  +K+S A WK VVGHH IK++
Sbjct:    1 MKMHVCFSVILMFLSIFFINGALSKLERLKHPVKKKSDGSLSFLVIGDWGRKGGFNQSLVAHQMGVVGEKLDIDFVISVGDNFYDDGLKGVNDPSFEASFSHIYTHPSLQKQWYSVLGNHDYRGNVEAQLSKVLTQKDWRWFCRRSFVLSSGMVDFFFADTNPFVEKYFTEPEDHTYDWRNVLPRNKYISNLLHDLDLEIKKSRATWKFVVGHHGIKTA 219          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA5_RAT (Tartrate-resistant acid phosphatase type 5 OS=Rattus norvegicus GN=Acp5 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.271e-12
Identity = 63/211 (29.86%), Postives = 97/211 (45.97%), Query Frame = 3
Query:  159 LPWFEHPAKPDGSLSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW------LCLRSFIVNAEIAEFIFVDTTPFV----DKYFTDPEDHVYDWSGIQPRKSYLANLLKDVDSALKESTAKWKIVVGHHTIKS 731
            LP   H   P  +L F+ VGDWG          R   N  ++A  + I+G     DFI+S GDNFY  G+   +D  F E+F ++++  +L    WY + GNHD+ G+V AQ++     I  RW        LR  +  + I   IF+  T  +    D + +   +   D    + + S+L   L    +A KE    + +V GH+ I S
Sbjct:   15 LPLLAHCTAPASTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQIMGA----DFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA--YSKISKRWNFPSPYYRLRFKVPRSNITVAIFMLDTVMLCGNSDDFVSQQPEMPRDLGVARTQLSWLKKQL----AAAKED---YVLVAGHYPIWS 212          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA5_RABIT (Tartrate-resistant acid phosphatase type 5 OS=Oryctolagus cuniculus GN=ACP5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.833e-12
Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 3
Query:  126 SLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWGRRGAYN-------QTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW 500
            +L +   +S  LPW E  A P  +L F+ VGDWG  G  N       +   A Q+G V + L   FI+S GDNFY  G+  V D  F E+F ++++  SL    WY + GNHD+ G+V AQ++     +  RW
Sbjct:    5 TLLLVLHTSLLLPWAEG-ATP--TLRFVAVGDWG--GVPNAPFHTAREMANAKQIGKVVQMLGAHFILSLGDNFYFSGVQSVSDKRFQETFEDVFSDRSLQNVPWYVLAGNHDHIGNVSAQIA--YSKVSKRW 130          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA5_HUMAN (Tartrate-resistant acid phosphatase type 5 OS=Homo sapiens GN=ACP5 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 3.699e-12
Identity = 45/121 (37.19%), Postives = 66/121 (54.55%), Query Frame = 3
Query:  177 PAKPDGS---LSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW 500
            P+  DG+   L F+ VGDWG          R   N  ++A  + I+G     DFI+S GDNFY  G+  ++D  F E+F ++++  SL K  WY + GNHD+ G+V AQ++     I  RW
Sbjct:   16 PSLADGATPALRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQILGA----DFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDHLGNVSAQIA--YSKISKRW 130          
BLAST of CF835867 vs. ExPASy Swiss-Prot
Match: PPA5_MOUSE (Tartrate-resistant acid phosphatase type 5 OS=Mus musculus GN=Acp5 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.076e-11
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 3
Query:  105 TFIALLGSLYVFCPSSAELPWFEHPAKPDGSLSFLVVGDWG---------RRGAYNQTKVAHQMGIVGEKLKIDFIISTGDNFYDDGLTGVDDVAFFESFVNIYTAPSLAK-QWYNVLGNHDYRGDVEAQLSPVLRDIDSRW 500
            +++ LLG   ++      LP   H   P  +L F+ VGDWG          R   N  ++A  +  +G     DFI+S GDNFY  G+    D  F E+F ++++  +L    WY + GNHD+ G+V AQ++     I  RW
Sbjct:    3 SWVVLLGLQIIW------LPLLTHGTAPTPTLRFVAVGDWGGVPNAPFHTAREMANAKEIARTVQTMGA----DFIMSLGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDHLGNVSAQIA--YSKISKRW 132          
The following BLAST results are available for this feature:
BLAST of CF835867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
PPA8_ARATH1.289e-8170.71Purple acid phosphatase 8 OS=Arabidopsis thaliana ... [more]
PPA3_ARATH1.683e-8163.11Purple acid phosphatase 3 OS=Arabidopsis thaliana ... [more]
PPA4_ARATH8.643e-7861.57Purple acid phosphatase 4 OS=Arabidopsis thaliana ... [more]
PPA17_ARATH1.292e-7358.18Purple acid phosphatase 17 OS=Arabidopsis thaliana... [more]
PPA7_ARATH1.865e-7257.53Purple acid phosphatase 7 OS=Arabidopsis thaliana ... [more]
PPA5_RAT1.271e-1229.86Tartrate-resistant acid phosphatase type 5 OS=Ratt... [more]
PPA5_RABIT2.833e-1237.59Tartrate-resistant acid phosphatase type 5 OS=Oryc... [more]
PPA5_HUMAN3.699e-1237.19Tartrate-resistant acid phosphatase type 5 OS=Homo... [more]
PPA5_MOUSE1.076e-1132.39Tartrate-resistant acid phosphatase type 5 OS=Mus ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02A15_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835867 ID=CF835867; Name=CF835867; organism=Citrus sinensis; type=EST; length=734bp
CCAAAGCTAGCTCTCTCTGGTAGCTACTTTTTCCTCAACTTCTCCCTCAC
TTTCATTTCGTGGCTGGTCTGAGGAACAGAGCCATGAGCCTAACACTTAT
TATTACGTTCATTGCTCTTCTAGGCAGCTTGTACGTTTTTTGCCCCTCAT
CGGCTGAGCTTCCATGGTTCGAACACCCGGCCAAACCCGATGGGTCTCTG
AGCTTTCTGGTCGTCGGAGATTGGGGAAGAAGAGGGGCCTACAACCAAAC
TAAAGTTGCCCACCAGATGGGAATAGTGGGAGAGAAGCTGAAGATTGATT
TCATAATATCAACCGGAGATAATTTTTATGATGATGGACTGACCGGTGTG
GACGATGTCGCATTCTTTGAATCATTTGTCAATATCTACACTGCTCCAAG
CTTGGCAAAACAATGGTATAATGTTCTGGGCAATCATGATTATAGAGGCG
ACGTTGAGGCACAATTGAGTCCCGTACTTAGAGACATAGACAGCCGATGG
CTTTGCTTGAGGTCTTTCATCGTTAACGCTGAAATTGCGGAATTTATCTT
CGTAGACACGACTCCTTTTGTTGATAAGTACTTCACAGATCCGGAAGACC
ATGTTTATGATTGGAGTGGCATTCAACCCAGAAAATCTTACCTTGCAAAT
CTCCTCAAGGATGTTGATTCAGCTTTGAAAGAATCAACAGCAAAATGGAA
AATAGTAGTAGGTCACCATACAATCAAAAGTAGC
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