CF835870

Overview
NameCF835870
Unique NameCF835870
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length556
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13509 contig Csv1_Contig13509:12..567. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIC2_ARATH (Probable acetyl-CoA acetyltransferase, cytosolic 2 OS=Arabidopsis thaliana GN=At5g47720 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.714e-47
Identity = 98/131 (74.81%), Postives = 109/131 (83.21%), Query Frame = -1
Query:  161 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 553
            EK L+LGL VIAKI GYADAAQAPE+FTT PALAIPKAI  AGL+ASQVD YEINEAF+VVALANQKLLGL+P+++N HGGAV+LGHPLGCSGARILVTLLGVLR K  KY          GASALV+E +
Sbjct:  275 EKALELGLHVIAKIRGYADAAQAPELFTTTPALAIPKAIKRAGLDASQVDYYEINEAFSVVALANQKLLGLDPERLNAHGGAVSLGHPLGCSGARILVTLLGVLRAKKGKYGVASICNGGGGASALVLEFM 405          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIC1_ARATH (Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabidopsis thaliana GN=AAT1 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.895e-47
Identity = 96/131 (73.28%), Postives = 112/131 (85.50%), Query Frame = -1
Query:  161 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 553
            EK L+LGL V+AKI GY DAAQ PE FTTAPALAIPKAI++AGLE+SQVD YEINEAFAVVALANQKLLG+ P+KVNV+GGAV+LGHPLGCSGARIL+TLLG+L+++N KY          GASALV+EL+
Sbjct:  273 EKALQLGLLVLAKIKGYGDAAQEPEFFTTAPALAIPKAIAHAGLESSQVDYYEINEAFAVVALANQKLLGIAPEKVNVNGGAVSLGHPLGCSGARILITLLGILKKRNGKYGVGGVCNGGGGASALVLELL 403          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_SCHPO (Acetyl-CoA acetyltransferase OS=Schizosaccharomyces pombe GN=erg10 PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 6.270e-36
Identity = 76/130 (58.46%), Postives = 102/130 (78.46%), Query Frame = -1
Query:  161 KVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 550
            KV +LGL+ +AKI G+ +AAQ PE FTT+P+LAIPKA+ +AG+EASQVD YEINEAF+VVA+AN K+LGL+P++VN++GG VA+GHPLG SG+RI+ TL  +L QK+ K           GAS++V+E V
Sbjct:  266 KVKELGLKPLAKIIGWGEAAQDPERFTTSPSLAIPKALKHAGIEASQVDYYEINEAFSVVAVANTKILGLDPERVNINGGGVAMGHPLGSSGSRIICTLAYILAQKDAKIGVAAVCNGGGGASSIVIERV 395          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL1_DICDI (Probable acetyl-CoA acetyltransferase OS=Dictyostelium discoideum GN=DDB_G0271544 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 5.869e-34
Identity = 75/125 (60.00%), Postives = 95/125 (76.00%), Query Frame = -1
Query:  167 KLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 541
            +LGL+ +A+I GYADA QAP  F TAPALAIPKA+ NAG+  SQVD +EINEAFAVV LAN K+L ++ +K+NV+GGAVALGHP+G SG RI+VTL  +L+ KN KY          G++ALV+E
Sbjct:  288 ELGLKPLARIIGYADAEQAPIEFPTAPALAIPKALKNAGINMSQVDLFEINEAFAVVGLANAKILDIDHNKLNVNGGAVALGHPIGSSGCRIVVTLTHLLQNKNLKYGVAAICNGGGGSTALVLE 412          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIA_CANTR (Acetyl-CoA acetyltransferase IA OS=Candida tropicalis GN=PACTA PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 2.466e-32
Identity = 69/130 (53.08%), Postives = 98/130 (75.38%), Query Frame = -1
Query:  161 KVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 550
            K+ +LGL+ +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q+  ++          GASA+V+E +
Sbjct:  268 KLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVNIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGVAGVCNGGGGASAVVIEKI 397          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIB_CANTR (Acetyl-CoA acetyltransferase IB OS=Candida tropicalis GN=PACTB PE=1 SV=3)

HSP 1 Score: 137.887 bits (346), Expect = 3.220e-32
Identity = 69/130 (53.08%), Postives = 98/130 (75.38%), Query Frame = -1
Query:  161 KVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 550
            K+ +LGL+ +AKI+G+ +AA+ P  FT APALA+PKA+ +AGL   +VD +E+NEAF+VV LAN +L+ +  +K+NV+GGAVA+GHPLGCSGARI+VTLL VL Q+  ++          GASA+V+E +
Sbjct:  268 KLKQLGLKPLAKISGWGEAARTPFDFTIAPALAVPKAVKHAGLTVDRVDFFELNEAFSVVGLANAELVKIPLEKLNVYGGAVAMGHPLGCSGARIIVTLLSVLTQEGGRFGAAGVCNGGGGASAIVIEKI 397          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_YEAST (Acetyl-CoA acetyltransferase OS=Saccharomyces cerevisiae GN=ERG10 PE=1 SV=3)

HSP 1 Score: 130.954 bits (328), Expect = 3.937e-30
Identity = 71/133 (53.38%), Postives = 95/133 (71.43%), Query Frame = -1
Query:  161 EKVLK-LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 553
            EKVLK   L+ +A I G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q+  K           GAS++V+E +
Sbjct:  266 EKVLKEKNLKPLAIIKGWGEAAHQPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSIVIEKI 398          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_SACBA (Acetyl-CoA acetyltransferase OS=Saccharomyces bayanus GN=ERG10 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.954e-29
Identity = 69/131 (52.67%), Postives = 94/131 (71.76%), Query Frame = -1
Query:  167 EKVLK-LGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLE-ASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVE 553
            E+VLK   L+ +A + G+ +AA  P  FT AP+LA+PKA+ +AG+E  + VD +E NEAF+VV L N K+L L+P KVNV+GGAVALGHPLGCSGAR++VTLL +L+Q+  K           GAS++V+E
Sbjct:  266 ERVLKEKNLKPLAIVKGWGEAAHLPADFTWAPSLAVPKALKHAGIEDINSVDYFEFNEAFSVVGLVNTKILKLDPSKVNVYGGAVALGHPLGCSGARVVVTLLSILQQEGGKIGVAAICNGGGGASSVVIE 396          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_YARLI (Acetyl-CoA acetyltransferase OS=Yarrowia lipolytica GN=PAT1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 5.883e-26
Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = -1
Query:  161 KVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQKNWKYXXXXXXXXXXGASALVVELV 550
            K  +LG  V+AKI  YADAA AP  FT AP+LAIP A+  AGL    +  +EINEAF+ VALAN   LG++  KVNV GGAVALGHP+G SG RI VTL+  L  K  +Y           ++A+V++ V
Sbjct:  266 KAKELGTPVLAKIVSYADAATAPIDFTIAPSLAIPAALKKAGLTKDDIALWEINEAFSGVALANLMRLGIDKSKVNVKGGAVALGHPIGASGNRIFVTLVNAL--KEGEYGVAAICNGGGASTAIVIKKV 393          
BLAST of CF835870 vs. ExPASy Swiss-Prot
Match: THIL_RAT (Acetyl-CoA acetyltransferase, mitochondrial OS=Rattus norvegicus GN=Acat1 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 5.506e-24
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = -1
Query:  236 EKVLKLGLQVIAKITGYADAAQAPEMFTTAPALAIPKAISNAGLEASQVDCYEINEAFAVVALANQKLLGLNPDKVNVHGGAVALGHPLGCSGARILVTLLGVLRQ 553
            E   +L ++ +A+I  +ADAA  P  F  APA A+PK +  AGL+   +  +E+NEAF+VV LAN K+L ++P KVNVHGGAV+LGHP+G SGARI+V L   L+Q
Sbjct:  296 EAAQRLKVKPLARIAAFADAAVDPIDFPLAPAYAVPKVLKYAGLKKEDIAMWEVNEAFSVVVLANIKMLEIDPQKVNVHGGAVSLGHPIGMSGARIVVHLAHALKQ 401          
The following BLAST results are available for this feature:
BLAST of CF835870 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 172
Match NameE-valueIdentityDescription
THIC2_ARATH2.714e-4774.81Probable acetyl-CoA acetyltransferase, cytosolic 2... [more]
THIC1_ARATH7.895e-4773.28Acetyl-CoA acetyltransferase, cytosolic 1 OS=Arabi... [more]
THIL_SCHPO6.270e-3658.46Acetyl-CoA acetyltransferase OS=Schizosaccharomyce... [more]
THIL1_DICDI5.869e-3460.00Probable acetyl-CoA acetyltransferase OS=Dictyoste... [more]
THIA_CANTR2.466e-3253.08Acetyl-CoA acetyltransferase IA OS=Candida tropica... [more]
THIB_CANTR3.220e-3253.08Acetyl-CoA acetyltransferase IB OS=Candida tropica... [more]
THIL_YEAST3.937e-3053.38Acetyl-CoA acetyltransferase OS=Saccharomyces cere... [more]
THIL_SACBA1.954e-2952.67Acetyl-CoA acetyltransferase OS=Saccharomyces baya... [more]
THIL_YARLI5.883e-2650.77Acetyl-CoA acetyltransferase OS=Yarrowia lipolytic... [more]
THIL_RAT5.506e-2451.89Acetyl-CoA acetyltransferase, mitochondrial OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02A17_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02A17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835870 ID=CF835870; Name=CF835870; organism=Citrus sinensis; type=EST; length=556bp
TTTTTTTTTTTTTTAATTATTATCTTTTTATTGAAGATGAAAGCACCTAT
GAAAAAGAAATGGAGATACAATTGCACAACACCCCACCCAAATGGGCCAT
AATTATCCTCCACAAGAAGGGTGCAACCTCGTTGATAATAATCCGAACAG
AAAATGCTTACACAAGCTCTACAACAAGTGCCGATGCACCTCCTCCTCCG
TTGCAAACGCCACCAACACCGTATTTCCAGTTTTTCTGCCTAAGTACCCC
CAAAAGTGTGACCAAGATACGAGCTCCGCTGCAGCCCAGAGGATGTCCCA
AAGCTACTGCTCCACCATGGACATTAACCTTGTCAGGATTTAGTCCAAGC
AATTTCTGGTTTGCAAGGGCGACGACAGCAAAGGCCTCATTTATTTCGTA
ACAGTCAACTTGAGAAGCCTCCAAGCCAGCATTTGAAATGGCTTTAGGTA
TGGCTAGGGCTGGAGCTGTTGTAAACATCTCTGGTGCCTGAGCAGCATCA
GCATATCCTGTGATCTTGGCGATCACTTGCAAACCCAGCTTAAGTACCTT
CTCTCT
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