CF835872
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2) HSP 1 Score: 265.003 bits (676), Expect = 3.793e-70 Identity = 145/226 (64.16%), Postives = 175/226 (77.43%), Query Frame = -1 Query: 119 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVA--RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 790 GLRG+S QAVLEGS Q++G NRLN SRV+V R G +RAQQ + PE+SRR+++GLVAAG+A GSFV+AV A+A PIKV GT NSD+ RD L LK+RF+IQPLSP AK+I+NVK IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G Sbjct: 10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.211e-69 Identity = 143/225 (63.56%), Postives = 169/225 (75.11%), Query Frame = -1 Query: 119 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 790 GLRG+S QAVLEGS Q+SG NRL+ P+ SRVAV + G +RAQQ S E ETSRRAMLG VAAG+ASGSFV+AVLA+A PI V GT NSD+ RD LP K+RF++QPL P A +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT KLF +I NLDHAAKIKS EAEKYY +TVS +N+VL+K+G Sbjct: 10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3) HSP 1 Score: 239.195 bits (609), Expect = 2.229e-62 Identity = 140/226 (61.95%), Postives = 166/226 (73.45%), Query Frame = -1 Query: 119 GLRGSSHSQAVLEGSFQLSGPNRLNAPSNSRVAVA-RPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXG-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 790 GL G+S AVLEGS +++G +RLN + RVAVA R VRAQQ+ ETSRR+++GLVAAG+A GSFVQAVLADA IKV T NSD+ RD L LK+RF++QPL P AKDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT KLF TI NLD+AAK KS +AEKYYAETVS LN+VL+K+G Sbjct: 6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 2.550e-58 Identity = 134/228 (58.77%), Postives = 161/228 (70.61%), Query Frame = -1 Query: 119 SQAVLEGSFQL-SGPNRLNAPSNSRVAVARPGFTVRAQQ---------ASNEPETSRRAMLGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 769 + +LEGS QL SG NR + S+SR F VRAQQ ++ +P+++RRAMLGLVA G+AS SFVQAVLA+A PIKV GTLNSDE RDL LPLKERF+IQPLSP AK+I+ VK+ ID+K NDLRLRASYLRYDLNT+IS+KPK++KQSLK + GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G Sbjct: 6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 8.489e-54 Identity = 117/207 (56.52%), Postives = 145/207 (70.05%), Query Frame = -1 Query: 119 SGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 736 +GP R A SR+AV VRA A+ + +T RRA+LGLVA G+A G+ QA LA+A PIK+ GTLNSD+ RD DLPL+ERF++QPL P A+DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI LDHAAKIKS EAEKYY T S L DVL+K+G Sbjct: 19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2) HSP 1 Score: 210.69 bits (535), Expect = 8.489e-54 Identity = 117/207 (56.52%), Postives = 145/207 (70.05%), Query Frame = -1 Query: 119 SGPNRLNAPSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 736 +GP R A SR+AV VRA A+ + +T RRA+LGLVA G+A G+ QA LA+A PIK+ GTLNSD+ RD DLPL+ERF++QPL P A+DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI LDHAAKIKS EAEKYY T S L DVL+K+G Sbjct: 19 AGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 7.186e-53 Identity = 119/221 (53.85%), Postives = 147/221 (66.52%), Query Frame = -1 Query: 119 SHSQAVLEGSFQLSGPNRLNAPSNSRVAVARPGFTVRAQQASNE-PETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 775 + + A + G Q P+R A S +R AV VRA + + RRA++GLVA G+ G+ QA A+ IK+ GTLNSD+ RD DLPLKERF++QPL P A+DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAKIKSTPEAEKY+A T L DVL+K+G Sbjct: 2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217
BLAST of CF835872 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 2.025e-47 Identity = 106/200 (53.00%), Postives = 130/200 (65.00%), Query Frame = -1 Query: 119 APSNSRVAVARPGFTVRAQQASNEPETSRRAMLGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXGTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXAKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 715 A S +R AV + + + P R + A +S QAV A+ IK+ GTLNSD+ RD DLPLKERF++QPL P A+DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAK+KSTPEAEKY+A T L DVL+K+G Sbjct: 20 ADSRTRTAVVVVRASAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213 The following BLAST results are available for this feature:
BLAST of CF835872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835872 ID=CF835872; Name=CF835872; organism=Citrus sinensis; type=EST; length=850bpback to top |