CF835889
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA4_ARATH (E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana GN=SINAT4 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 3.892e-68 Identity = 123/184 (66.85%), Postives = 137/184 (74.46%), Query Frame = 3 Query: 108 MELDSIECVSSMDGLMDEDEISXXXXXXXXXXXQFASSKPHXXXXXXXXXXXXXXXXXXXXPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 ME DS+ECVSS + ++ QF+S+K H PTA APATSV+ELLECPVCT SMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+Y+LGCPEIFPYYSKLKHE +C FRPY+CPYAGS+C +VGDIP+LVAH Sbjct: 1 METDSMECVSSTGNEIHQN-------GNGHQSYQFSSTKTHGGAAAAAVVTNIVG------PTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAH 171
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA3_ARATH (E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana GN=SINAT3 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 5.261e-65 Identity = 119/184 (64.67%), Postives = 133/184 (72.28%), Query Frame = 3 Query: 108 MELDSIECVSSMDGLMDEDEISXXXXXXXXXXXQFASSKPHXXXXXXXXXXXXXXXXXXXXPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 M+LDS++C S+MD + D++EI +AS H + TSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCK RVHNRCPTCRQELGDIRCLALEKVAESLELPCK+ LGCPEIFPYYSKLKHE +C FRPY+CPYAGS+CSV GDIP+LVAH Sbjct: 1 MDLDSMDCTSTMD-VTDDEEI-------HQDRHSYASVSKHHHTNNNTTNVNAAASG------LLPTTTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKHMSLGCPEIFPYYSKLKHETVCNFRPYSCPYAGSECSVTGDIPFLVAH 170
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA5_ARATH (E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana GN=SINAT5 PE=1 SV=2) HSP 1 Score: 240.736 bits (613), Expect = 4.924e-63 Identity = 119/184 (64.67%), Postives = 132/184 (71.74%), Query Frame = 3 Query: 108 MELDSIECVSSMDGLMDEDEISXXXXXXXXXXXQFASSKPHXXXXXXXXXXXXXXXXXXXXPTAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 ME DSI D ++D+DEI QF+S+K I+PATSV+ELLECPVCTNSMYPPIHQCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPCKYY+LGC IFPYYSKLKHE C FRPY+CPYAGS+C+ VGDI +LVAH Sbjct: 1 METDSI------DSVIDDDEIHQKH--------QFSSTKSQGGAT-----------------VVISPATSVYELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYNLGCLGIFPYYSKLKHESQCNFRPYSCPYAGSECAAVGDITFLVAH 153
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA2_ARATH (E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana GN=SINAT2 PE=2 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.033e-53 Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = 3 Query: 318 VHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 V+ELLECPVCTN MYPPIHQC NGHTLCS CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC +IFPYYSKLKHE C FRPY CPYAGS+CSV GDIP LV H Sbjct: 54 VYELLECPVCTNLMYPPIHQCPNGHTLCSNCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCHDIFPYYSKLKHEQHCRFRPYTCPYAGSECSVTGDIPTLVVH 167
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA1_ARATH (Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana GN=SINAT1 PE=2 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 2.994e-52 Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 3 Query: 309 ATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 + V+ELLECPVCTN MYPPIHQC NGHTLCS+CK RV N CPTCR ELG+IRCLALEKVAESLE+PC+Y +LGC +IFPYYSKLKHE C FR Y+CPYAGS+CSV GDIP LV H Sbjct: 48 SNGVYELLECPVCTNLMYPPIHQCPNGHTLCSSCKLRVQNTCPTCRYELGNIRCLALEKVAESLEVPCRYQNLGCQDIFPYYSKLKHEQHCRFRSYSCPYAGSECSVTGDIPTLVDH 164
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SINA_SCHMA (E3 ubiquitin-protein ligase sina OS=Schistosoma mansoni GN=SINA PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 7.934e-29 Identity = 57/126 (45.24%), Postives = 83/126 (65.87%), Query Frame = 3 Query: 294 TAIAPATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDI----PYLVAH 659 T+ + + + L ECPVC + PPI QC +GH +C++C++++ + CPTCR L +IR LA+EK+A S+ PCKY GCPE F Y SK +HE C +RPY+CP G+ C +G++ P+LV H Sbjct: 112 TSDSSSIDLASLFECPVCMDYALPPIMQCQSGHIVCASCRSKLSS-CPTCRGNLDNIRNLAMEKLASSVLFPCKYSTSGCPETFHYTSKSEHEAACEYRPYDCPCPGASCKWLGELEQVMPHLVHH 236
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SIAH1_DANRE (E3 ubiquitin-protein ligase Siah1 OS=Danio rerio GN=siah1 PE=2 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 54/119 (45.38%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 303 APATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 A + + L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC P+ K +HE +C FRPY+CP G+ C G + ++ H Sbjct: 30 ASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPH 147
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SIAH1_RAT (E3 ubiquitin-protein ligase SIAH1 OS=Rattus norvegicus GN=Siah1 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 327 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC P+ K +HE +C FRPY+CP G+ C G + ++ H Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPH 147
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SIA1A_MOUSE (E3 ubiquitin-protein ligase SIAH1A OS=Mus musculus GN=Siah1a PE=1 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.654e-26 Identity = 53/111 (47.75%), Postives = 70/111 (63.06%), Query Frame = 3 Query: 327 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC P+ K +HE +C FRPY+CP G+ C G + ++ H Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKAEHEELCEFRPYSCPCPGASCKWQGSLDAVMPH 147
BLAST of CF835889 vs. ExPASy Swiss-Prot
Match: SIAH1_HUMAN (E3 ubiquitin-protein ligase SIAH1 OS=Homo sapiens GN=SIAH1 PE=1 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 2.822e-26 Identity = 53/111 (47.75%), Postives = 69/111 (62.16%), Query Frame = 3 Query: 327 LLECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYHLGCPEIFPYYSKLKHEVMCTFRPYNCPYAGSDCSVVGDIPYLVAH 659 L ECPVC + + PPI QC +GH +CS C+ ++ CPTCR LG IR LA+EKVA S+ PCKY GC P+ K HE +C FRPY+CP G+ C G + ++ H Sbjct: 38 LFECPVCFDYVLPPILQCQSGHLVCSNCRPKL-TCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPH 147 The following BLAST results are available for this feature:
BLAST of CF835889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835889 ID=CF835889; Name=CF835889; organism=Citrus sinensis; type=EST; length=659bpback to top |