CF835926
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835926 vs. ExPASy Swiss-Prot
Match: CCA21_ARATH (Cyclin-A2-1 OS=Arabidopsis thaliana GN=CYCA2-1 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 2.020e-22 Identity = 81/233 (34.76%), Postives = 116/233 (49.79%), Query Frame = 3 Query: 105 MPRSSSRHVNINKENKTHAKIEEPTSRITRAKAKALGTSGGIFPSSKPTFKPDHKHVLRMNSKRGASDENKASVTATSGIQHKRRAVLKDVTNICENSHRNYSSFAKIQTRKQPSSSPPKKIAKVSSDVCAENLLVEEDVKEKLAEELSKIRMGEPQEVT---ENTSECGKADRNHPTHVSEKPFGLQGHQMREENNLCEELQSNGPSIVNIDSNLEDPQVCSLYAPDIYNNI 794 M R+SS+H N KE + +KI + R+TR++AKALG S SKP FK + K V R ++KR ASD ++T + KRRAVLKDVTN S + K+ K+ K + + + L+ + K KLAE+LSKIRM E + + + +C + DR+ T + IV+IDS ++DPQ CSLYA IY++I Sbjct: 1 MHRASSKHTNAKKEAISTSKIRDNNVRVTRSRAKALGVSNS---PSKPAFKHETKRVARPSNKRMASD----NITVCN---QKRRAVLKDVTNTLAESIISTEGNVKVAC---------KRGGKETKQIEEDGLVDVDGEKSKLAEDLSKIRMVESLDASASKQKLVDCAEEDRSDVTDCVQ--------------------------IVDIDSGVQDPQFCSLYAASIYDSI 188
BLAST of CF835926 vs. ExPASy Swiss-Prot
Match: CCA21_ORYSJ (Cyclin-A2-1 OS=Oryza sativa subsp. japonica GN=CYCA2-1 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.488e-21 Identity = 74/234 (31.62%), Postives = 114/234 (48.72%), Query Frame = 3 Query: 141 KENKTHAKIEEPTSRITRAKAKALGTSGGIFPSSKPTFKPDHKHVLRMNSKRGASDENKASVTATSGIQHKRRAVLKDVTNI-CENSHRNYSSFAKIQTRKQPS---------SSPPKKIAKVSSDVCAENLLVEEDVKEKLAEELSKIRM----GEPQEVTENTS--ECGKADRNHPTHVSEKPFGLQGHQMREENNLCEELQSNGPSIVNIDSNLEDPQVCSLYAPDIYNNI 794 KEN + P+ RITRA+A A G PS + + K + +KRGA DE ++ TATS Q KRR VLKDVTNI C NS +N ++ +K+Q + +P+ KK+ K+ A V + K +EE K+ + EP + EN +RN ++ E F + + E + S+G ++ID++ +PQ+C+ YA +IY N+ Sbjct: 5 KENPVLTACQAPSGRITRAQAAANRGRFGFAPSVSLPARTERKQTAKGKTKRGALDEITSASTATSAPQPKRRTVLKDVTNIGCANSSKNCTTTSKLQQKSKPTQRVKQIPSKKQCAKKVPKLPPPAVAGTSFV---IDSKSSEETQKVELLAKAEEPTNLFENEGLLSLQNIERNRDSNCHEAFFEARNAMDKHELADSKPGDSSGLGFIDIDNDNGNPQMCASYASEIYTNL 235
BLAST of CF835926 vs. ExPASy Swiss-Prot
Match: CCA22_ARATH (Cyclin-A2-2 OS=Arabidopsis thaliana GN=CYCA2-2 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.448e-20 Identity = 81/229 (35.37%), Postives = 111/229 (48.47%), Query Frame = 3 Query: 114 SSSRHVNINKENKTHAKIEEPTSRITRAKAKALGTSGGIFPSSKPTFKPDHKHVLRMNSKRGASDENKASVTATSGIQHKRRAVLKDVTNICENSHRNYSSFAKIQTRK--QPSSSPPKKIAKVSSDVCAENLLVEEDVKEKLAEELSKIRMGEPQEVTENTSECGKADRNHPTHVSEKPFGLQGHQMREENNLCEELQSNGPSIVNIDSNLEDPQVCSLYAPDIYNNI 794 SSS H N NKEN + + ++E RITR++AK G P +KP+FK Q KRRAVLKDV+N ++ YS K K + PKK AK ++ + L+ K KLAE+LSKIRM E Q+V+ + + ++E Q + + + E LQ +V+IDSN+EDPQ CSLYA DIY+NI Sbjct: 4 SSSMHPNANKENISTSDVQESFVRITRSRAKKAMGRGVSIPPTKPSFK-----------------------------QQKRRAVLKDVSN--TSADIIYSELRKGGNIKANRKCLKEPKKAAKEGANSAMDILVDMHTEKSKLAEDLSKIRMAEAQDVSLSNFK--------DEEITE--------QQEDGSGVMELLQ-----VVDIDSNVEDPQCCSLYAADIYDNI 180
BLAST of CF835926 vs. ExPASy Swiss-Prot
Match: CCA24_ARATH (Cyclin-A2-4 OS=Arabidopsis thaliana GN=CYCA2-4 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.005e-13 Identity = 68/211 (32.23%), Postives = 101/211 (47.87%), Query Frame = 3 Query: 186 ITRAKAKALGTSGGIFPSSKPTFKPDHK-HVLRMNSKRGASDENKASVTATSGIQHKRRAVLKDVTNI-CENSHRNYSSFA-----KIQTRKQPSSSPPKKIAKVSSDVCAENLLVEEDVKEKLAEELSKIRMGEPQEVTENTSECGKADRNHPTHVSE-KPFGLQGHQMREENNLCEELQSNGPSIVNIDSNLEDPQVCSLYAPDIYNNI 794 +TRA A AL S + SS+ ++ VLR SKR A DE KA+ K+RAVLKD+TN+ CENS+ + S A +I+ +Q SSS + +S V D K ++ + + + + T+E + P+ S +PFG ++ P V+IDS+ +DP +CSLYAPDIY N+ Sbjct: 19 VTRALASALRASSKLITSSEVAATTQNQGRVLRAKSKRTALDEKKANAP-------KKRAVLKDITNVTCENSYTSCFSVAVENIKQIKKGRQSSSSSKVASSSATSQVT--------DAKVEVVSNSAGASLSVFTDTSLGTNETSYSIIAKPSSRSPPRPFGTVERSCGG---------ASSPKFVDIDSDDKDPLLCSLYAPDIYYNL 205 The following BLAST results are available for this feature:
BLAST of CF835926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835926 ID=CF835926; Name=CF835926; organism=Citrus sinensis; type=EST; length=794bpback to top |