CF835933

Overview
NameCF835933
Unique NameCF835933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length730
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8246 contig Csv1_Contig8246:359..1085. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA_AVIMR (Catalase OS=Avicennia marina PE=2 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.646e-79
Identity = 135/173 (78.03%), Postives = 154/173 (89.02%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            EMLAF+P ++VPGI +SNDKMLQ RIFAYGDTQRHRLGPNYL+LPV APKC + NNHYDGFMNFMHRDEEVDYFPS+YDPT HAER+PIP+ VITGRR++  IEKE+NFKQ G+RYRSWAPDRQERFL RW+ AL DPR+T E+ SIWVSYW QAD+S GQKLAS LNVRP++
Sbjct:  320 EMLAFSPHMIVPGINFSNDKMLQTRIFAYGDTQRHRLGPNYLLLPVNAPKCAYHNNHYDGFMNFMHRDEEVDYFPSKYDPTRHAERHPIPNAVITGRRDRRVIEKEDNFKQAGDRYRSWAPDRQERFLRRWVDALSDPRLTLEIRSIWVSYWSQADKSFGQKLASRLNVRPTM 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_GOSHI (Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 PE=2 SV=2)

HSP 1 Score: 293.508 bits (750), Expect = 7.697e-79
Identity = 134/173 (77.46%), Postives = 148/173 (85.55%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P IVVPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  APKC H NNH++GFMNFMHRDEE++YFPSRYDP  HAE +PIP  V TGRREK  IEKENNFKQPGERYRSWA DRQERF+ RW+ AL DPRVTHE+ SIW+SYW QAD+S+GQKLAS LNVRPSI
Sbjct:  320 EQLAFCPAIVVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEINYFPSRYDPVRHAEMFPIPPAVCTGRREKCIIEKENNFKQPGERYRSWAADRQERFICRWVDALSDPRVTHEIRSIWISYWSQADKSVGQKLASLLNVRPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_NICPL (Catalase isozyme 1 (Fragment) OS=Nicotiana plumbaginifolia GN=CAT1 PE=2 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.925e-78
Identity = 131/173 (75.72%), Postives = 149/173 (86.13%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP  APKC H NNHYDG MNFMHRDEE+DYFPSRYDP  HAE+YPIPS + TG+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++ L DPR+T+E+ SIW+SYW QAD+SLGQKLAS LNVRPSI
Sbjct:  313 EQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDPVRHAEKYPIPSTMCTGKREKCVIQKENNFKQPGERYRSFTPDRQERFIRRWVETLSDPRITYEIRSIWISYWSQADKSLGQKLASRLNVRPSI 485
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_GOSHI (Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 290.041 bits (741), Expect = 8.510e-78
Identity = 131/173 (75.72%), Postives = 151/173 (87.28%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P ++VPGIYYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  APKC H NNH++GFMNFMHRDEEV+YFPSRYDP  HAE++PIPS V++G+REK  I KENNFKQPGERYRS++ DRQERF+NRWI AL DPRVTHE+ SIW+SYW QAD+SLGQK+AS LNVRPSI
Sbjct:  320 EQLAFCPSLIVPGIYYSDDKLLQTRIFSYSDTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRYDPVRHAEKHPIPSTVLSGKREKCIIGKENNFKQPGERYRSFSADRQERFINRWIDALSDPRVTHEIRSIWISYWSQADKSLGQKIASRLNVRPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA4_SOYBN (Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.896e-77
Identity = 129/173 (74.57%), Postives = 148/173 (85.55%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P IVVPG+YYS+DKMLQ RIF+Y D+QRHRLGPNYL LP  APKC H NNH++GFMNF+HRDEEV+YFPSRYDP  HAER+PIP  + +GRREK  IEKENNFKQPGERYRSWAPDRQ+RF  RW+ AL DPRVTHE+ S+W+SYW QADRSLGQK+AS L+ RP+I
Sbjct:  320 EQLAFCPAIVVPGVYYSDDKMLQTRIFSYADSQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFIHRDEEVNYFPSRYDPVRHAERFPIPPAICSGRREKCGIEKENNFKQPGERYRSWAPDRQDRFARRWVDALSDPRVTHEIRSVWISYWSQADRSLGQKIASHLSTRPNI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_CUCPE (Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 SV=1)

HSP 1 Score: 288.886 bits (738), Expect = 1.896e-77
Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  APKC H NNH++GFMNFMHRDEEV+YFPSR+DP+ HAERYP P  V +G+RE+  IEKENNFK+PGERYRSW PDRQERF+ RW+ AL D RVTHE+ SIW+SYW QADRSLGQKLAS LNVRPSI
Sbjct:  320 EQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHEGFMNFMHRDEEVNYFPSRFDPSRHAERYPHPPAVCSGKRERCIIEKENNFKEPGERYRSWTPDRQERFVRRWVDALSDTRVTHEIRSIWISYWSQADRSLGQKLASHLNVRPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA1_SOYBN (Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.224e-77
Identity = 127/173 (73.41%), Postives = 147/173 (84.97%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPG+YYS+DK+LQ R+F+Y DTQRHRLGPNYL LP  APKC H NNH+DGFMNFMHRDEEV+YFPSRYDP  HAE+ P+P  ++ G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+ SIW+SYW QADRSLGQK+AS LN++PSI
Sbjct:  320 EQLAFCPAIIVPGVYYSDDKLLQTRVFSYADTQRHRLGPNYLQLPANAPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAEKVPVPPRILGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA3_SOYBN (Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1)

HSP 1 Score: 286.96 bits (733), Expect = 7.204e-77
Identity = 128/173 (73.99%), Postives = 146/173 (84.39%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P I+VPG+YYS+DK+LQ RIF+Y DTQRHRLGPNYL LP  +PKC H NNH+DGFMNFMHRDEEV+YFPSRYDP  HAER P+P   + G+REK  IEKENNFKQPGERYRSW  DRQERF+ RW+ AL DPRVTHE+ SIW+SYW QADRSLGQK+AS LN++PSI
Sbjct:  320 EQLAFCPAIIVPGVYYSDDKLLQTRIFSYADTQRHRLGPNYLQLPANSPKCAHHNNHHDGFMNFMHRDEEVNYFPSRYDPVRHAERVPVPPRTLGGKREKCMIEKENNFKQPGERYRSWPSDRQERFVRRWVDALSDPRVTHEIRSIWISYWSQADRSLGQKIASHLNLKPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_SOLLC (Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2 PE=2 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 9.409e-77
Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            E LAF P IVVPG+YYS+DKMLQ RIF+Y DTQR+RLGPNYL LP  APKC H NNHYDG MNFMHRDEE+DYFPSRYD   HAE YPIPS V +G+REK  I+KENNFKQPGERYRS+ PDRQERF+ RW++AL DPR+T+E+ SIW++YW QAD+SLGQKLAS LNVRPSI
Sbjct:  320 EQLAFCPSIVVPGVYYSDDKMLQTRIFSYSDTQRYRLGPNYLQLPANAPKCAHHNNHYDGSMNFMHRDEEIDYFPSRYDQVRHAEVYPIPSTVCSGKREKCIIQKENNFKQPGERYRSFTPDRQERFIRRWVEALSDPRITYEIRSIWITYWSQADKSLGQKLASRLNVRPSI 492
[Close]
BLAST of CF835933 vs. ExPASy Swiss-Prot
Match: CATA2_RICCO (Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.229e-76
Identity = 130/173 (75.14%), Postives = 148/173 (85.55%), Query Frame = -3 
Query:  210 EMLAFNPGIVVPGIYYSNDKMLQCRIFAYGDTQRHRLGPNYLMLPVYAPKCPHRNNHYDGFMNFMHRDEEVDYFPSRYDPTCHAERYPIPSDVITGRREKACIEKENNFKQPGERYRSWAPDRQERFLNRWIKALCDPRVTHEVGSIWVSYWFQADRSLGQKLASCLNVRPSI 728
            EMLAFNP  VVPG+YYSNDK+ Q R+FAY DTQRHRLG NYL LPV APKCP+ NNHYDGFMNFMHRDEEVDYF SRYDP  HAE+ PIP+ + +GRREK  IEKE+NF+QPG+RYRSWAPDRQERFL R + AL +PR+THE+ SIWVS+W Q D+SLGQKLAS LNVRP+I
Sbjct:  320 EMLAFNPAHVVPGVYYSNDKLFQLRLFAYSDTQRHRLGTNYLQLPVNAPKCPYHNNHYDGFMNFMHRDEEVDYFQSRYDPVRHAEKVPIPNAICSGRREKCVIEKEDNFRQPGDRYRSWAPDRQERFLCRLVNALSEPRITHEIRSIWVSWWTQCDKSLGQKLASRLNVRPNI 492
The following BLAST results are available for this feature:
BLAST of CF835933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 118
Match NameE-valueIdentityDescription
CATA_AVIMR2.646e-7978.03Catalase OS=Avicennia marina PE=2 SV=1[more]
CATA1_GOSHI7.697e-7977.46Catalase isozyme 1 OS=Gossypium hirsutum GN=CAT1 P... [more]
CATA1_NICPL2.925e-7875.72Catalase isozyme 1 (Fragment) OS=Nicotiana plumbag... [more]
CATA2_GOSHI8.510e-7875.72Catalase isozyme 2 OS=Gossypium hirsutum GN=CAT2 P... [more]
CATA4_SOYBN1.896e-7774.57Catalase-4 OS=Glycine max GN=CAT4 PE=2 SV=1[more]
CATA1_CUCPE1.896e-7775.14Catalase isozyme 1 OS=Cucurbita pepo GN=CAT1 PE=2 ... [more]
CATA1_SOYBN4.224e-7773.41Catalase-1/2 OS=Glycine max GN=CAT1 PE=2 SV=1[more]
CATA3_SOYBN7.204e-7773.99Catalase-3 OS=Glycine max GN=CAT3 PE=2 SV=1[more]
CATA2_SOLLC9.409e-7775.14Catalase isozyme 2 OS=Solanum lycopersicum GN=CAT2... [more]
CATA2_RICCO1.229e-7675.14Catalase isozyme 2 OS=Ricinus communis GN=CAT2 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02C09_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835933 ID=CF835933; Name=CF835933; organism=Citrus sinensis; type=EST; length=730bp
TTTTTTTTTTTTTTTTTCTAAAACAGACTTTTATTAATTGACCCTCAGGA
AAAGAGTCACATAACATGCAAGTTTATTTTCTCTATTACAATATACAACA
GCAAACATAGGATCGAAATTCTTCACATAGCTGCACCCTTGGGGTTCACT
CCTTGCTCACTCTTGGCAAGTCAAAAGCATCCAGTGTTCCAGTTCAAGTG
ACACCTTCAAATGCTTGGCCTCACATTGAGACAAGAAGCTAGCTTCTGAC
CCAAAGATCTGTCGGCCTGAAACCAGTAAGAGACCCATATGCTGCCAACC
TCATGGGTGACACGTGGGTCACATAAAGCCTTAATCCATCGATTAAGGAA
CCTCTCTTGCCTGTCTGGGGCCCAGGATCGGTATCTCTCTCCAGGCTGCT
TGAAGTTGTTTTCCTTCTCAATGCAAGCCTTCTCACGCCTTCCTGTAATT
ACATCAGAAGGAATGGGATATCTCTCAGCATGACAAGTAGGATCATACCT
CGAAGGAAAGTAATCGACCTCCTCATCCCTGTGCATGAAATTCATGAAAC
CATCATAATGATTGTTGCGATGAGGACATTTGGGTGCATAAACTGGAAGC
ATCAAGTAGTTGGGTCCAAGGCGATGCCTCTGGGTATCACCATAGGCAAA
GATTCGACATTGGAGCATCTTATCATTTGAGTAGTAGATCCCAGGAACCA
CGATACCAGGGTTAAATGCAAGCATTTCAT
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