CF835968

Overview
NameCF835968
Unique NameCF835968
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9528 contig Csv1_Contig9528:20..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_MEDSA (Protein disulfide-isomerase OS=Medicago sativa GN=PDI PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.153e-25
Identity = 65/159 (40.88%), Postives = 95/159 (59.75%), Query Frame = 1
Query:  157 EETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSR--LASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIGFGLDESV 609
            EE+       V+ LD +NF   +   D+I+V+FYAPWCGHCK+LAP+ ++AA IL+  + P+V+AKVDA++     LAS+ ++  FPT+KIF +G     EY GPR+AE +V YLKK   P  + + S  + + FV +        FP F G   D  +
Sbjct:   25 EESSTDAKEFVLTLDNTNFHDTVKKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSTHEPPVVLAKVDANEEHNKDLASENDVKGFPTIKIFRNGGKNIQEYKGPREAEGIVEYLKKQSGPASTEIKSADDATAFVGDNKVVIVGVFPKFSGEEYDNFI 183          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_WHEAT (Protein disulfide-isomerase OS=Triticum aestivum GN=PDI PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 68/148 (45.95%), Postives = 87/148 (58.78%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAE-----------VSDFVENAGTFFPLFI 585
            V+ L   NFD AI+   +ILV+FYAPWCGHCK LAP+ ++AA +L+K    IV+AKVDA  +K   LA K E+  FPTLKIF  G     EY GPR+AE +V YLKK V P    + +  +           V  F E +GT F  F+
Sbjct:   41 VLTLHADNFDDAIAKHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRSGGKNIQEYKGPREAEGIVEYLKKQVGPASKEIKAPEDATYLEDGKIHIVGVFTEFSGTEFTNFL 188          

HSP 2 Score: 75.8702 bits (185), Expect = 2.256e-13
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK-IFMHGIPTEYYGPRKAELLVRYLKK 495
            KV+  D  + D    S   +L++FYAPWCGHCK+LAP LDEAA  L + +E +VIAK+DA   + +  + ++  +PTL  +   G    Y G R A+ +V Y+KK
Sbjct:  385 KVVVADNIH-DVVFKSAKNVLIEFYAPWCGHCKKLAPILDEAAATL-QSEEDVVIAKIDATA-NDVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIKK 486          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_HORVU (Protein disulfide-isomerase OS=Hordeum vulgare GN=PDI PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.967e-25
Identity = 61/111 (54.95%), Postives = 76/111 (68.47%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAP 507
            V+ L   NFD AI    +ILV+FYAPWCGHCK LAP+ ++AA +L+K    IV+AKVDA  +K   LA K E+  FPTLKIF +G  +  EY GPR+AE +V YLKK V P
Sbjct:   40 VLTLHADNFDDAIGQHPFILVEFYAPWCGHCKSLAPEYEKAAQLLSKHDPAIVLAKVDANDEKNKPLAGKYEVQGFPTLKIFRNGGKSIQEYKGPREAEGIVEYLKKQVGP 150          

HSP 2 Score: 74.3294 bits (181), Expect = 6.564e-13
Identity = 43/105 (40.95%), Postives = 65/105 (61.90%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK-IFMHGIPTEYYGPRKAELLVRYLKK 495
            KV+  D  + D    S   +L++FYAPWCGHCK+LAP LDEAA  L + +E +VIAK+DA + + +  + ++  +PTL  +   G    Y G R A+ +V Y++K
Sbjct:  384 KVVVADNVH-DVVFKSGKNVLIEFYAPWCGHCKKLAPILDEAAATL-QSEEDVVIAKMDATE-NDVPGEFDVQGYPTLYFVTPSGKKVSYEGGRTADEIVDYIRK 485          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_MAIZE (Protein disulfide-isomerase OS=Zea mays GN=PDI PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.356e-25
Identity = 71/162 (43.83%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  151 SEEETKFKIDGK-VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDA--DKYSRLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAP---------DVSILNSDAE---VSDFVENAGTFFPLFI 585
            +EEE     +G+ V+ LD  +FD A++   +++V+FYAPWCGHCK+LAP+ + AA  L+K   PIV+AKVDA  +K   LA+K EI  FPT+KIF        EY GPR+A+ +V YLKK V P         D + L  D +   V  F E +GT F  F+
Sbjct:   23 AEEEPAAAAEGEAVLTLDVDSFDEAVAKHPFMVVEFYAPWCGHCKKLAPEYENAAKALSKHDPPIVLAKVDANEEKNRPLATKYEIQGFPTIKIFRDRGKNIQEYKGPREADGIVDYLKKQVGPASKEIKSPEDATALIDDKKIYIVGIFAEFSGTEFTNFM 184          

HSP 2 Score: 72.4034 bits (176), Expect = 2.494e-12
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1
Query:  184 KVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLK-IFMHGIPTEYYGPRKAELLVRYLKK 495
            KV+  D  + D    S   +L++FYAPWCGHCK+LAP LDEAA  L +  E +VIAK+DA   + + S+ ++  +PTL  +   G  T Y   R A+ +V ++KK
Sbjct:  381 KVVVADNVH-DFVFKSGKNVLIEFYAPWCGHCKKLAPILDEAATTL-QSDEEVVIAKMDATA-NDVPSEFDVQGYPTLYFVTPSGKVTSYDSGRTADDIVDFIKK 482          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI1_ARATH (Probable protein disulfide-isomerase 1 OS=Arabidopsis thaliana GN=At1g21750 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.724e-25
Identity = 70/181 (38.67%), Postives = 102/181 (56.35%), Query Frame = 1
Query:  148 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIGFGLDESVMSNLALKYKKKAWFAVAKD 666
            S E ETK      V+ LD +NF   I+  D+I+V+FYAPWCGHCK+LAP+ ++AA  L+    P+V+AK+DA + +    A++ E+  FPT+KIF +G     EY GPR+AE +V YLKK   P  + + S  + S+ V +        FP   G   D  +   +A K + +  FA   D
Sbjct:   23 SEETETK----EFVLTLDHTNFTDTINKHDFIVVEFYAPWCGHCKQLAPEYEKAASALSSNVPPVVLAKIDASEETNREFATQYEVQGFPTIKIFRNGGKAVQEYNGPREAEGIVTYLKKQSGPASAEIKSADDASEVVSDKKVVVVGIFPKLSGSEFDSFMA--IAEKLRSELDFAHTSD 197          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_DATGL (Protein disulfide-isomerase OS=Datisca glomerata GN=PDI PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.275e-24
Identity = 61/142 (42.96%), Postives = 90/142 (63.38%), Query Frame = 1
Query:  187 VIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHG--IPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGT----FFPLFIG 588
            V+ LD+SNF   +S  ++I+V+FYAPWCGHCK+LAP+ ++AA IL+    P+++AKVDA++ +   LAS+ E+  FPT+KI  +G  I  EY GPR A+ +V YLKK   P  + + S  + ++ V          FP F G
Sbjct:   35 VLTLDKSNFFDTVSKHNFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVILAKVDANEEANKELASEFEVRGFPTIKILRNGGKIVQEYKGPRDADGIVDYLKKQSGPPSAEIKSIEDATNLVSEKKIVVVGIFPKFSG 176          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_RICCO (Protein disulfide-isomerase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 2.841e-24
Identity = 65/154 (42.21%), Postives = 91/154 (59.09%), Query Frame = 1
Query:  151 SEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYS--RLASKQEIDAFPTLKIFMHGIPT--EYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVENAGTF----FPLFIG 588
            SEEE        V+ LD +NF   IS  D+I+V+FYAPWCGHCK+L P+ ++AA IL     P+V+AKVDA++ +   LA++ +I  FPTLKI  +G  +  EY GPR+A+ +  YLKK   P    + S    + F+ +   F    FP F G
Sbjct:   27 SEEE-----QSSVLTLDSTNFTDTISKHDFIVVEFYAPWCGHCKKLRPEYEKAASILKSHDIPVVLAKVDANEEANKELATQYDIKGFPTLKILRNGGKSIQEYKGPREADGIAEYLKKQSGPASVEIKSTEAANTFIGDKKIFIVGVFPKFSG 175          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDIA4_RAT (Protein disulfide-isomerase A4 OS=Rattus norvegicus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23
Identity = 51/123 (41.46%), Postives = 81/123 (65.85%), Query Frame = 1
Query:  190 IELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 558
            + L + NFD  +++ D ILV+FYAPWCGHCK+LAP+ ++AA  L+K   PI +AKVDA + + LA + ++  +PTLKIF  G P +Y GPR+   +V Y+ +   P    + +  +V +F+++
Sbjct:  178 LTLTKENFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTLKIFRKGRPFDYNGPREKYGIVDYMVEQSGPPSKEILTLKQVQEFLKD 300          

HSP 2 Score: 100.908 bits (250), Expect = 6.549e-21
Identity = 51/142 (35.92%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  154 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPD------VSILNSDAEVSDFVENA 561
            E++ + K +  V  L++ NFD+ ++  D +L++FYAPWCGHCK+ AP+ ++ A  L     PI +AK+DA   S LASK ++  +PT+KI   G   +Y G R  E +V  +++   PD      V++  +     D V NA
Sbjct:   51 EDDLEVKEENGVWVLNDENFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTLTLTKENFDDVVNNA 192          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDIA4_MOUSE (Protein disulfide-isomerase A4 OS=Mus musculus GN=Pdia4 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 1.841e-23
Identity = 51/123 (41.46%), Postives = 81/123 (65.85%), Query Frame = 1
Query:  190 IELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 558
            + L + NFD  +++ D ILV+FYAPWCGHCK+LAP+ ++AA  L+K   PI +AKVDA + + LA + ++  +PTLKIF  G P +Y GPR+   +V Y+ +   P    + +  +V +F+++
Sbjct:  173 LSLTKDNFDDVVNNADIILVEFYAPWCGHCKKLAPEYEKAAKELSKRSPPIPLAKVDATEQTDLAKRFDVSGYPTLKIFRKGRPFDYNGPREKYGIVDYMIEQSGPPSKEILTLKQVQEFLKD 295          

HSP 2 Score: 98.9821 bits (245), Expect = 2.489e-20
Identity = 50/142 (35.21%), Postives = 81/142 (57.04%), Query Frame = 1
Query:  154 EEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPD------VSILNSDAEVSDFVENA 561
            +++ + K +  V  L++ NFD+ ++  D +L++FYAPWCGHCK+ AP+ ++ A  L     PI +AK+DA   S LASK ++  +PT+KI   G   +Y G R  E +V  +++   PD      V++  +     D V NA
Sbjct:   46 DDDLEVKEENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQAVDYDGSRTQEEIVAKVREVSQPDWTPPPEVTLSLTKDNFDDVVNNA 187          
BLAST of CF835968 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 9.138e-23
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 1
Query:  148 SSEEETKFKIDGKVIELDESNFDSAISSFDYILVDFYAPWCGHCKRLAPQLDEAAPILAKLKEPIVIAKVDADKYSRLASKQEIDAFPTLKIFMHGIPTEYYGPRKAELLVRYLKKFVAPDVSILNSDAEVSDFVEN 558
            ++  E + K++  V+     NF   I+  +++LV+FYAPWCGHCK LAP+  +AA  LA+ + PI +AKVDA     LA +  +  +PTLK F  G P EY G R+A  ++ ++ K   P    L S A+   F+++
Sbjct:   16 AASAEAEVKVEEGVLVATVDNFKQLIADNEFVLVEFYAPWCGHCKALAPEYAKAAQQLAEKESPIKLAKVDATVEGELAEQYAVRGYPTLKFFRSGSPVEYSGGRQAADIIAWVTKKTGPPAKDLTSVADAEQFLKD 152          
The following BLAST results are available for this feature:
BLAST of CF835968 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
PDI_MEDSA1.153e-2540.88Protein disulfide-isomerase OS=Medicago sativa GN=... [more]
PDI_WHEAT1.967e-2545.95Protein disulfide-isomerase OS=Triticum aestivum G... [more]
PDI_HORVU1.967e-2554.95Protein disulfide-isomerase OS=Hordeum vulgare GN=... [more]
PDI_MAIZE3.356e-2543.83Protein disulfide-isomerase OS=Zea mays GN=PDI PE=... [more]
PDI1_ARATH5.724e-2538.67Probable protein disulfide-isomerase 1 OS=Arabidop... [more]
PDI_DATGL1.275e-2442.96Protein disulfide-isomerase OS=Datisca glomerata G... [more]
PDI_RICCO2.841e-2442.21Protein disulfide-isomerase OS=Ricinus communis PE... [more]
PDIA4_RAT1.841e-2341.46Protein disulfide-isomerase A4 OS=Rattus norvegicu... [more]
PDIA4_MOUSE1.841e-2341.46Protein disulfide-isomerase A4 OS=Mus musculus GN=... [more]
PDI_DROME9.138e-2337.96Protein disulfide-isomerase OS=Drosophila melanoga... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02D07_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835968 ID=CF835968; Name=CF835968; organism=Citrus sinensis; type=EST; length=681bp
TTTCATTCCATCTTTTAAGAGCGAAACTGAAAACAAATCACATCGAAATT
GCATATGCGAGGGATGAGTAAAGGTAGAATATGGATCTTATTGTGTCTGT
TGTTATTGACAGGAAGAGGTATGATGTTATTGACAGGAAGAGGCTTGTCT
TCGGAAGAAGAAACAAAATTCAAAATTGACGGGAAAGTAATAGAACTTGA
CGAATCCAACTTCGATTCTGCAATCTCGTCTTTTGATTACATTTTAGTCG
ATTTTTACGCTCCTTGGTGCGGCCACTGCAAGCGCCTCGCTCCTCAGTTA
GACGAAGCTGCTCCGATACTTGCTAAATTGAAAGAGCCAATTGTAATAGC
AAAAGTAGACGCTGACAAGTACAGCCGTCTTGCTAGTAAGCAAGAGATTG
ATGCATTTCCTACATTGAAGATATTTATGCATGGGATTCCTACGGAATAT
TATGGACCTAGAAAAGCAGAATTGCTTGTCCGTTATCTTAAGAAATTTGT
TGCCCCTGATGTCTCCATTCTTAATTCAGATGCGGAAGTTTCTGACTTTG
TTGAAAATGCTGGTACTTTCTTTCCCCTATTTATTGGTTTCGGGTTGGAT
GAATCAGTCATGTCAAACTTAGCTTTGAAGTATAAGAAAAAGGCCTGGTT
TGCTGTCGCTAAGGATTTCTCTGAGGACACC
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