CF835974
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835974 vs. ExPASy Swiss-Prot
Match: TPP2_ARATH (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.207e-55 Identity = 116/214 (54.21%), Postives = 154/214 (71.96%), Query Frame = 2 Query: 62 PNYQPKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTVP-ESDYVDKGGTT--DKIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVAT 694 P +P A+ +T+A EI +G C SP+++G++SLM T P + M GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG K++ S+ ++ W++KLLN+CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLDVGDR++AEKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ Sbjct: 67 PRARP-ASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGLGISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSN------GGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVAS 269
BLAST of CF835974 vs. ExPASy Swiss-Prot
Match: TPP1_ARATH (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana GN=TPP1 PE=2 SV=2) HSP 1 Score: 214.542 bits (545), Expect = 4.207e-55 Identity = 127/234 (54.27%), Postives = 160/234 (68.38%), Query Frame = 2 Query: 2 ECLPLHRVFCHSKKTDLHPPPNYQPKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASIIPFLQGSKWLPCNEPGTVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL---QEIGFSSGDVFIKRIVAT 694 E L R F H K D P +P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SIIPFLQGSKW+ P D VDKGGT E+ NG S W++KLL+VCS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLD GDR++AEKVSYFF++PEVSDIVIF+APPIL E G+SS DVFIKRIVA+ Sbjct: 30 ESLVRPRFFSH--KRDFDRSPRNRPASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSIIPFLQGSKWIK-----NPPVIDDVDKGGTVCDDD-DDKESRNGGS-------GWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVAS 242
BLAST of CF835974 vs. ExPASy Swiss-Prot
Match: PLSP1_ARATH (Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1 PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.410e-26 Identity = 63/131 (48.09%), Postives = 85/131 (64.89%), Query Frame = 2 Query: 299 TVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 691 + P D D GG G ++ V + + WL + SDDA+ F A+ VS F+ F+AEPR IPS SM PT DVGDR++AEKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA Sbjct: 75 SAPSLDSGDGGGGD-----GGDDDKGEVEEKNRLFPEWL----DFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVA 196
BLAST of CF835974 vs. ExPASy Swiss-Prot
Match: LEP1_SYNY3 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803) GN=lepB1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16 Identity = 40/76 (52.63%), Postives = 54/76 (71.05%), Query Frame = 2 Query: 464 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 691 AL ++ L + F+AEPR IPS SM PTL+ GDR++ EKVSY F P+V DI++F P +LQ G+ G FIKR++A Sbjct: 23 ALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQAFIKRVIA 98 The following BLAST results are available for this feature:
BLAST of CF835974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835974 ID=CF835974; Name=CF835974; organism=Citrus sinensis; type=EST; length=696bpback to top |