CF835981

Overview
NameCF835981
Unique NameCF835981
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10981 contig Csv1_Contig10981:34..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835981 vs. ExPASy Swiss-Prot
Match: MGDP1_MOUSE (Magnesium-dependent phosphatase 1 OS=Mus musculus GN=Mdp1 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.268e-25
Identity = 64/158 (40.51%), Postives = 93/158 (58.86%), Query Frame = 3
Query:   99 VPRLVVFDLDYTLWPFYCEC--------------RSKR-EMPSLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 527
            +P+L VFDLDYTLWPF+ +               R +R +   LYP    +L  L+  G+ VA ASR+     AN  LE  ++   F+ +EI+     K  HF+R+H +TGVPF+ M+FFDDE+RNI  V ++GVT I + +G++L  L QGL  F++
Sbjct:    4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDLGKYFIQREIYPG--SKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTCIHIRDGMSLQTLTQGLETFAK 159          
BLAST of CF835981 vs. ExPASy Swiss-Prot
Match: MGDP1_HUMAN (Magnesium-dependent phosphatase 1 OS=Homo sapiens GN=MDP1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.963e-25
Identity = 66/158 (41.77%), Postives = 91/158 (57.59%), Query Frame = 3
Query:   99 VPRLVVFDLDYTLWPFYCEC--------------RSKREMP-SLYPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIKSMFVAKEIFSSWSHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKFSQ 527
            +P+L VFDLDYTLWPF+ +               R +R     LYP    +L  L+  G+  A ASR+   + AN  LE  ++   FV +EI+     K  HF+R+  +TG+PF+ M+FFDDE RNI  VSK+GVT I + NG+NL  L QGL  F++
Sbjct:    4 LPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQDVRLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLFRYFVHREIYPG--SKITHFERLQQKTGIPFSQMIFFDDERRNIVDVSKLGVTCIHIQNGMNLQTLSQGLETFAK 159          
BLAST of CF835981 vs. ExPASy Swiss-Prot
Match: MGDP1_SCHPO (Putative magnesium-dependent phosphatase P8B7.31 OS=Schizosaccharomyces pombe GN=SPBP8B7.31 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.333e-17
Identity = 58/164 (35.37%), Postives = 88/164 (53.66%), Query Frame = 3
Query:  102 PRLVVFDLDYTLWPFYCECR-------SKREMPSL----------YPHAKGILHALKDKGIDVAVASRSPSPDIANTFLEKLNIK---SMFVAKEIFS---SW-SHKTDHFQRIHSRTGVPFNSMLFFDDEDRNIDAVSKMGVTGILVGNGVNLGALRQGLTKF 521
            P+ VVFDLDYTLWP + +         SK +   L          Y    GIL  L+++ + + VASR+ +P  A   L  + +    S+  A E F+   +W   K DHF+ IH+ +G+ +  M+FFDDE RN + V ++GVT  LV +G+N  +  QG+ K+
Sbjct:    8 PKCVVFDLDYTLWPLWIDTHVTAPFKPSKNDPGVLIDKYGTEICFYSDITGILQELRNQKVTLCVASRTCAPKYAKQALNLMKVPIDGSLKPAIEFFTYVKAWPGSKMDHFKEIHNESGIDYREMVFFDDESRNRE-VERLGVTFCLVPDGLNRASFEQGINKW 170          
The following BLAST results are available for this feature:
BLAST of CF835981 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
MGDP1_MOUSE2.268e-2540.51Magnesium-dependent phosphatase 1 OS=Mus musculus ... [more]
MGDP1_HUMAN2.963e-2541.77Magnesium-dependent phosphatase 1 OS=Homo sapiens ... [more]
MGDP1_SCHPO1.333e-1735.37Putative magnesium-dependent phosphatase P8B7.31 O... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS03_02D18_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02D18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835981 ID=CF835981; Name=CF835981; organism=Citrus sinensis; type=EST; length=740bp
TCCAACGGCAACCCTGCAAAAGAAAAGACATTTGAGAAGAGATGGGTGAA
GAAAAAGTGAAAGAAGAAGCGATGGGGATAATTGGAATGTTCCAAGTTGT
CCCTCGTTTAGTCGTTTTCGATCTTGATTACACTCTCTGGCCTTTCTACT
GTGAATGTCGCTCCAAACGTGAAATGCCATCTTTGTATCCTCATGCTAAA
GGCATATTACATGCTCTCAAGGACAAAGGGATTGATGTAGCTGTTGCTTC
TCGGTCGCCGAGCCCTGATATAGCAAACACTTTTCTCGAAAAATTGAACA
TCAAGTCCATGTTTGTTGCAAAGGAGATTTTTTCCAGTTGGTCACATAAG
ACCGATCACTTCCAGAGAATTCATTCTAGAACTGGAGTTCCTTTTAACTC
GATGCTCTTTTTTGATGATGAGGATCGGAACATTGATGCGGTTTCAAAAA
TGGGGGTGACAGGCATTTTGGTTGGTAATGGGGTTAATCTTGGAGCATTA
AGGCAAGGTCTTACAAAATTCTCGCAAAACTGGAATACATCTCAGAAGAA
CAAGCAAAAATGGATATCCAAGTTCTCTCAAAAGCCAGATGCATCTGAGA
AGATAGACCAGAAATGAAGAGCTCTGTATAAGGGCATTTGCTCATTCTTA
CACCAATTTAACACCCTGAAAATTGTTTCCATCGCTGTTGTGGATTATTT
TGAAAATCCAGATCTGGTTATGAACTGATTAGTATTGTTT
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