CF835992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835992 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 277.715 bits (709), Expect = 5.587e-74 Identity = 137/163 (84.05%), Postives = 152/163 (93.25%), Query Frame = -2 Query: 357 VVSSLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSE 845 + SS+KHGEGK+TSLGFDMQTVGK+LAYTLRSETRF+NFR+NKA AGLSVTHLGDS+SAG+KVEDK I +K FR+VM+GGAMTSR D AYGG+LEAQLRD DYPLGR LTTLGLSVMDWHGDLAIG NIQSQVPIGRS+N+I RANLNNRGAGQVS+RVNSSE Sbjct: 1016 MASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSVRVNSSE 1178
BLAST of CF835992 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 271.937 bits (694), Expect = 3.066e-72 Identity = 135/163 (82.82%), Postives = 150/163 (92.02%), Query Frame = -2 Query: 357 VVSSLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSE 845 + SS+KHGEG++TSLGFDMQ GK+LAYT+RSETRF+ FRKNKA AGLSVT LGDS+SAG+KVEDKLI NKRFR+VM+GGAMTSR DVAYGG+LEAQ RD DYPLGR L+TLGLSVMDWHGDLAIG NIQSQVPIGRS+N+I RANLNNRGAGQVSIRVNSSE Sbjct: 898 LASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSIRVNSSE 1060
BLAST of CF835992 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.484e-42 Identity = 80/160 (50.00%), Postives = 118/160 (73.75%), Query Frame = -2 Query: 357 SLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSE 836 S KHGE +T GFD+Q VGK LAY +R ET+F N RKNK G SVT LG++++ GVK+ED++ + KR +V + G M S+ D AYG +LE +LR+AD+P+G+ ++ GLS++ W GDLA+G N+QSQV +GR++ + RA LNN+ +GQ+++R +SS+ Sbjct: 1312 SAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWRGDLALGANLQSQVSVGRNSKIALRAGLNNKMSGQITVRTSSSD 1471
BLAST of CF835992 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 2.085e-20 Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = -2 Query: 357 SLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSE 806 S+ D+Q+ G+DL Y+ + T+ F+ N G+ +T G G K+ED L+V KR ++ G M A GGS EA +R DYP+ L ++ + + +L + +Q+Q R TN+ N+NNR G++++++NSSE Sbjct: 605 SVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSE 754 The following BLAST results are available for this feature:
BLAST of CF835992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835992 ID=CF835992; Name=CF835992; organism=Citrus sinensis; type=EST; length=846bpback to top |