CF835993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835993 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.808e-113 Identity = 198/242 (81.82%), Postives = 223/242 (92.15%), Query Frame = 1 Query: 4 LDSSNQWLVRPVLETHGWDHDVGYEGINAERLFVVKNKIPISFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLIPPIEKVAGLF 729 LDSSNQWLVRPVLETHGWDHD+GYEG+NAERLFVVK KIPIS SGQVTKDKKDANVQ+E+ SS+KHGEGK+TSLGFDMQTVGK+LAYTLRSETRF+NFR+NKA AGLSVTHLGDS+SAG+KVEDK I +K FR+VM+GGAMTSR D AYGG+LEAQLRD DYPLGR LTTLGLSVMDWHGDLAIG NIQSQVPIGRS+N+I RANLNNRGAGQVS+RVNSSEQLQLA++ ++P +K+ + Sbjct: 957 LDSSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRFNNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEAQLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSVRVNSSEQLQLAMVAIVPLFKKLLSYY 1198
BLAST of CF835993 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 1.296e-111 Identity = 195/238 (81.93%), Postives = 222/238 (93.28%), Query Frame = 1 Query: 4 LDSSNQWLVRPVLETHGWDHDVGYEGINAERLFVVKNKIPISFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLIPPIEKV 717 LD+SNQWLVRPVLETHGWDHD+GYEG+NAERLFVVK+KIP+SFSGQVTKDKKDA+VQ+E+ SS+KHGEG++TSLGFDMQ GK+LAYT+RSETRF+ FRKNKA AGLSVT LGDS+SAG+KVEDKLI NKRFR+VM+GGAMTSR DVAYGG+LEAQ RD DYPLGR L+TLGLSVMDWHGDLAIG NIQSQVPIGRS+N+I RANLNNRGAGQVSIRVNSSEQLQLA++ L+P +K+ Sbjct: 839 LDTSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSIRVNSSEQLQLAVVALVPLFKKL 1076
BLAST of CF835993 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.829e-66 Identity = 115/233 (49.36%), Postives = 171/233 (73.39%), Query Frame = 1 Query: 4 LDSSNQWLVRPVLETHGWDHDVGYEGINAERLFVVKNKIPISFSGQVTKDKKDANVQMEVVSSLKHGEGKATSLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLIP 702 L+ ++Q L RPVL+THGWDHD GY+G+NAE + ++ P + + QVTKDKK+ N+ ++ S KHGE +T GFD+Q VGK LAY +R ET+F N RKNK G SVT LG++++ GVK+ED++ + KR +V + G M S+ D AYG +LE +LR+AD+P+G+ ++ GLS++ W GDLA+G N+QSQV +GR++ + RA LNN+ +GQ+++R +SS+QLQ+AL ++P Sbjct: 1250 LEPTSQLLTRPVLDTHGWDHDCGYDGVNAEHSLALASRFPATATVQVTKDKKEFNIHLDSSVSAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWRGDLALGANLQSQVSVGRNSKIALRAGLNNKMSGQITVRTSSSDQLQIALTAILP 1482
BLAST of CF835993 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 6.147e-37 Identity = 78/233 (33.48%), Postives = 129/233 (55.36%), Query Frame = 1 Query: 4 LDSSNQWLVRPVLETHGWDHDVGYEGINAERLFVVKNKIPISFSGQVTKDKKDANVQMEVVSSLKHGEGKAT-SLGFDMQTVGKDLAYTLRSETRFSNFRKNKAMAGLSVTHLGDSLSAGVKVEDKLIVNKRFRVVMTGGAMTSRSDVAYGGSLEAQLRDADYPLGRSLTTLGLSVMDWHGDLAIGCNIQSQVPIGRSTNMIGRANLNNRGAGQVSIRVNSSEQLQLALIGLI 699 + + +QWLVRPV + GWD DVG++GIN E + + S +GQV++DK+ +Q E ++ + T S+ D+Q+ G+DL Y+ + T+ F+ N G+ +T G G K+ED L+V KR ++ G M A GGS EA +R DYP+ L ++ + + +L + +Q+Q R TN+ N+NNR G++++++NSSE ++ALI + Sbjct: 532 VSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTRNFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLNYGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISAL 764 The following BLAST results are available for this feature:
BLAST of CF835993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835993 ID=CF835993; Name=CF835993; organism=Citrus sinensis; type=EST; length=765bpback to top |