CF836004
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: R15A1_ARATH (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA PE=2 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 2.322e-56 Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 SMYNAEKRGKRQVMI PSSKVIIKFL+ MQKHGYIGE EYVDDHR+GKIVVELNGR+NKCGVISPRFDVGVKEI GWT RLLPSRQ+GYIVLTT AGIM HEEARRKNVGGK+ GFFY Sbjct: 13 SMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_BRANA (40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3) HSP 1 Score: 216.083 bits (549), Expect = 6.755e-56 Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 SM+NAEKRGKRQVMI PSSKVIIKFL+ MQKHGYIGE EYVDDHR+GKIVVELNGR+NKCGVISPRFDVGVKEI GWT RLLPSRQ+GYIVLTT AGIM HEEARRKNVGGK+ GFFY Sbjct: 13 SMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: R15A4_ARATH (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD PE=2 SV=3) HSP 1 Score: 216.083 bits (549), Expect = 6.755e-56 Identity = 104/118 (88.14%), Postives = 110/118 (93.22%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 SMYNAEKRGKRQVMI PSSKVIIKFL+ MQKHGYIGE EYVDDHR+GKIVVELNGR+NKCGVISPRFDVGVKEI GWT RLLPSRQ+G+IVLTT AGIM HEEARRKNVGGK+ GFFY Sbjct: 13 SMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS15A_DAUCA (40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 7.468e-55 Identity = 102/118 (86.44%), Postives = 109/118 (92.37%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 SM+NAEKRGKRQVMI PSSKV+IKFL+ MQKHGYIGE EYVDDHR+GKIVVELNGR+NKCGVISPRFDVGVKEI WT RLLPSRQ+GYIVLTT AGIM HEEARRKNVGGK+ GFFY Sbjct: 13 SMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: R15A3_ARATH (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC PE=2 SV=2) HSP 1 Score: 202.601 bits (514), Expect = 7.729e-52 Identity = 97/118 (82.20%), Postives = 106/118 (89.83%), Query Frame = -3 Query: 133 SMYNAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 486 SM NAEK+GKRQVMI PSSKVIIKFL MQKHGYI E EYVDDHR+GKIVVELNGR+N CGVISPR+D+GVKEI GWT +LLPSRQ+GYIVLTT AGIM HEEAR+KNVGGK+ GFFY Sbjct: 13 SMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGKIVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKNVGGKVLGFFY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22A_YEAST (40S ribosomal protein S22-A OS=Saccharomyces cerevisiae GN=RPS22A PE=1 SV=2) HSP 1 Score: 182.185 bits (461), Expect = 1.081e-45 Identity = 85/115 (73.91%), Postives = 99/115 (86.09%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEK GKRQV+I PSSKVIIKFL MQKHGYIGE EY+DDHR+GKIVV+LNGR+NKCGVISPRF+V + +I WT LLP+RQ+GY++LTT AGIM HEEARRK+V GK+ GF Y Sbjct: 16 NAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22_CANAL (40S ribosomal protein S22 OS=Candida albicans GN=RPS22A PE=3 SV=3) HSP 1 Score: 181.415 bits (459), Expect = 1.844e-45 Identity = 84/115 (73.04%), Postives = 98/115 (85.22%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEK GKRQV+I PSSKVIIKFL MQKHGYIGE EY+DDHR+GKIVV+LNGR+NKCGVI PRF+V + +I WT LLP+RQ+GY++LTT AGIM HEEARRK+V GK+ GF Y Sbjct: 16 NAEKTGKRQVLIRPSSKVIIKFLTVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVIQPRFNVKINDIERWTDNLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22B_YEAST (40S ribosomal protein S22-B OS=Saccharomyces cerevisiae GN=RPS22B PE=1 SV=3) HSP 1 Score: 181.415 bits (459), Expect = 1.844e-45 Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEK GKRQV++ PSSKVIIKFL MQKHGYIGE EY+DDHR+GKIVV+LNGR+NKCGVISPRF+V + +I WT LLP+RQ+GY++LTT AGIM HEEARRK+V GK+ GF Y Sbjct: 16 NAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22_CANGA (40S ribosomal protein S22 OS=Candida glabrata GN=RPS22 PE=3 SV=3) HSP 1 Score: 181.03 bits (458), Expect = 2.408e-45 Identity = 84/115 (73.04%), Postives = 99/115 (86.09%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEK GKRQV+I PSSKVIIKFL MQ+HGYIGE EY+DDHR+GKIVV+LNGR+NKCGVISPRF+V + +I WT LLP+RQ+GY++LTT AGIM HEEARRK+V GK+ GF Y Sbjct: 16 NAEKTGKRQVLIRPSSKVIIKFLQVMQRHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKHVSGKILGFVY 130
BLAST of CF836004 vs. ExPASy Swiss-Prot
Match: RS22_KLUMA (40S ribosomal protein S22 OS=Kluyveromyces marxianus GN=RPS22 PE=3 SV=3) HSP 1 Score: 180.644 bits (457), Expect = 3.145e-45 Identity = 83/115 (72.17%), Postives = 98/115 (85.22%), Query Frame = -3 Query: 133 NAEKRGKRQVMISPSSKVIIKFLLAMQKHGYIGESEYVDDHRAGKIVVELNGRVNKCGVISPRFDVGVKEIVGWTGRLLPSRQYGYIVLTTCAGIMGHEEARRKNVGGKLFGFFY 477 NAEK GKRQV+I PSSKVIIKFL MQKHGYIGE EY+DDHR+GKIVV+LNGR+NKCGVISPRF+V + ++ WT LLP+RQ+GY++LTT AGIM HEEA RK+V GK+ GF Y Sbjct: 16 NAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGKIVVQLNGRLNKCGVISPRFNVKISDVEKWTANLLPARQFGYVILTTSAGIMDHEEAHRKHVSGKILGFVY 130 The following BLAST results are available for this feature:
BLAST of CF836004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836004 ID=CF836004; Name=CF836004; organism=Citrus sinensis; type=EST; length=488bpback to top |