CF836016

Overview
NameCF836016
Unique NameCF836016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length780
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1144 contig Csv1_Contig1144:1011..1791. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 307.76 bits (787), Expect = 4.449e-83
Identity = 141/148 (95.27%), Postives = 145/148 (97.97%), Query Frame = -1
Query:  337 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMA 780
            GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL+CRFFQYSPNLRCTALEAC+HP FDELRDPNTRLPNGRPLPPLFNFKP ELSGIPPE +NRL+PEHARKQNLFMA
Sbjct:  271 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTALEACIHPLFDELRDPNTRLPNGRPLPPLFNFKPQELSGIPPEIVNRLVPEHARKQNLFMA 418          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 3.766e-82
Identity = 139/148 (93.92%), Postives = 145/148 (97.97%), Query Frame = -1
Query:  337 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMA 780
            GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDL+CRFFQYSPNLRCTA+EAC+HPFFDELRDPN RLPNGRPLPPLFNFKP ELSGIPPET++RL+PEHARKQN FMA
Sbjct:  270 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLLCRFFQYSPNLRCTAVEACIHPFFDELRDPNARLPNGRPLPPLFNFKPQELSGIPPETVDRLVPEHARKQNHFMA 417          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.800e-69
Identity = 120/143 (83.92%), Postives = 129/143 (90.21%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLRC AL++ VHPFFDELRDPN RLPNGR LPPLFNFKP EL G+P E + +L+PEHARKQ
Sbjct:  261 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCAALDSLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPVEMVAKLVPEHARKQ 403          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.657e-69
Identity = 123/148 (83.11%), Postives = 131/148 (88.51%), Query Frame = -1
Query:  337 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFMA 780
            GCV+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR PPEAVDLV R  QYSPNLR TA+EA VHPFFDELRDPNTRLPNGR LPPLFNFKP EL G   E +++LIP+HARKQ  F+A
Sbjct:  262 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRTPPEAVDLVSRLLQYSPNLRSTAMEAIVHPFFDELRDPNTRLPNGRALPPLFNFKPQELKGASLELLSKLIPDHARKQCSFLA 409          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 6.896e-68
Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLR  AL+  VHPFFDELRDPN RLPNGR LPPLFNFKP EL G+P E + +L+PEHARKQ
Sbjct:  257 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSAALDTLVHPFFDELRDPNARLPNGRFLPPLFNFKPHELKGVPLEMVAKLVPEHARKQ 399          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.536e-67
Identity = 119/143 (83.22%), Postives = 127/143 (88.81%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+ ELLLGQPLFPG SGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F+KR+PPEAVDLV R  QYSPNLR TALEA VHPFFDELRDPNTRLPNGR LPPLFNFK  EL G+P E + +L+P HARKQ
Sbjct:  262 GCVLGELLLGQPLFPGASGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFRKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFFDELRDPNTRLPNGRHLPPLFNFKANELKGVPAEMLVKLVPSHARKQ 404          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.536e-67
Identity = 119/143 (83.22%), Postives = 126/143 (88.11%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+AELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNY EFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLRCTALEA  H FFDELRDPNTRLPNGR LPPLFNFK  EL G+  E + +L+PEHARKQ
Sbjct:  261 GCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYNEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRCTALEAVTHAFFDELRDPNTRLPNGRVLPPLFNFKAHELKGVSAENLLKLVPEHARKQ 403          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.422e-67
Identity = 118/147 (80.27%), Postives = 127/147 (86.39%), Query Frame = -1
Query:  340 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQNLFM 780
            GCV+AELLLGQPLFPGE GVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+P EAVDLV R  QYSPNLRC AL+   HPFFDELRDPN RLP GR LPPLFNFKP EL G+P ET+ +L+PEHARKQ  F+
Sbjct:  263 GCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPFFDELRDPNARLPTGRFLPPLFNFKPHELKGVPVETLMKLVPEHARKQCPFL 409          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 254.603 bits (649), Expect = 4.470e-67
Identity = 117/143 (81.82%), Postives = 128/143 (89.51%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+AELLLGQPLFPGE+ VDQLVEIIKVLGTPTREEI+CMNPNYT+F+FPQIK HPWHKVF KR+PPEA+DL  R  QYSP+LRCTALEAC HPFF+ELR+PN RLPNGRPLPPLFNFK  ELSG  PE INRLIPEH R+Q
Sbjct:  260 GCVLAELLLGQPLFPGENSVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFNELREPNARLPNGRPLPPLFNFK-QELSGASPELINRLIPEHVRRQ 401          
BLAST of CF836016 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.301e-66
Identity = 117/143 (81.82%), Postives = 127/143 (88.81%), Query Frame = -1
Query:  352 GCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACVHPFFDELRDPNTRLPNGRPLPPLFNFKPPELSGIPPETINRLIPEHARKQ 780
            GCV+ ELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIK HPWHK+F KR+PPEAVDLV R  QYSPNLR TALEA VHPF+D++RDPNTRLPNGR LPPLFNFK  EL G+P E + +L+P HARKQ
Sbjct:  262 GCVLGELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPPEAVDLVSRLLQYSPNLRSTALEALVHPFYDDVRDPNTRLPNGRFLPPLFNFKVNELKGVPAEMLVKLVPPHARKQ 404          
The following BLAST results are available for this feature:
BLAST of CF836016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 100
Match NameE-valueIdentityDescription
KSG10_ARATH4.449e-8395.27Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG4_ARATH3.766e-8293.92Shaggy-related protein kinase delta OS=Arabidopsis... [more]
KSG3_ARATH2.800e-6983.92Shaggy-related protein kinase gamma OS=Arabidopsis... [more]
KSG5_ARATH3.657e-6983.11Shaggy-related protein kinase epsilon OS=Arabidops... [more]
KSG1_ARATH6.896e-6883.22Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
MSK2_MEDSA1.536e-6783.22Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
MSK1_TOBAC1.536e-6783.22Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
MSK1_MEDSA3.422e-6780.27Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
KSG6_ARATH4.470e-6781.82Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
MSK3_MEDSA1.301e-6681.82Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E13_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836016 ID=CF836016; Name=CF836016; organism=Citrus sinensis; type=EST; length=780bp
TTTTTTTTTTTTTTTTTAATATTTTACAGATTCTCATATTTTTCATCTCA
CTAAACTCGCCCATGAAACAGGGATACAACAAATTACATGATAAGTTAAA
AAAAAAAAAAAAATTGTCTTCATCCAAAGCCGTAACTCGTAATGACAAAT
AAACAAACTCAAAGCCTCAGTCAGGTCTCCCAAATTCTCCTAAACATTCC
TTCTGCAACACTCTTTCCTCACCGGAACTAAAGAGACAATGATAAATGAA
AAAACGGTGACGGATTTTTACAAGTGTCGATAAAACGTTCAAGATAAACT
TACGGAGGAGACTTGTAACAGATGCTAAGAGTGCAAAGCCATGAATAAGT
TCTGCTTACGAGCGTGCTCTGGGATGAGTCTGTTGATGGTTTCAGGTGGG
ATGCCCGAAAGCTCTGGAGGTTTAAAATTAAACAGGGGTGGAAGGGGGCG
ACCATTAGGAAGGCGGGTGTTTGGGTCCCTTAATTCATCAAAGAAAGGGT
GAACACAAGCTTCCAGAGCAGTGCATCGTAAGTTGGGAGAGTACTGGAAA
AATCTACAGACGAGGTCCACAGCTTCTGGGGGTAAACGCTTTTGGAAGAC
CTTGTGCCACGGATGAGGCTTTATCTGTGGGAACTTAAATTCTGTATAGT
TTGGATTCATGCACTTTATCTCCTCTCGGGTTGGTGTTCCCAAAACCTTG
ATAATCTCAACTAGTTGGTCAACTCCACTTTCACCAGGAAACAAAGGCTG
TCCAAGAAGCAACTCAGCCATCACACAACC
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