CF836017

Overview
NameCF836017
Unique NameCF836017
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length801
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1144 contig Csv1_Contig1144:1..801. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG10_ARATH (Shaggy-related protein kinase kappa OS=Arabidopsis thaliana GN=ASK10 PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 1.398e-71
Identity = 131/175 (74.86%), Postives = 146/175 (83.43%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            VDWL R++ E R+RD+V+ D++RDSEPDIIDG GAE GHVIRTT+ GRNG S+Q VSYI+EHVVGTGSFG+VFQAKCRETGE+VAIKKVLQDKRYKNRELQIMQMLDHPN VALKH FFS TD               TVNR+AR+YSR +Q MPLIYVKLYTYQICRALAYIHN
Sbjct:   26 VDWLTRDLAETRIRDKVETDDERDSEPDIIDGAGAEPGHVIRTTLRGRNGQSRQTVSYISEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNAVALKHSFFSRTDNEEVYLNLVLEFVPETVNRVARSYSRTNQLMPLIYVKLYTYQICRALAYIHN 200          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG4_ARATH (Shaggy-related protein kinase delta OS=Arabidopsis thaliana GN=ASK4 PE=2 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.068e-71
Identity = 129/175 (73.71%), Postives = 146/175 (83.43%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            VDWL R+MLEM++RD+ + DE+RDSEPDIIDGVGAE GHVI TT+ GRNG S+Q VSYIAEHVVGTGSFG+VFQAKCRETGE+VAIKKVLQDKRYKNRELQIMQMLDHPN+V LKH F+S T+               TVNR AR+YSR++Q MPLIYVKLYTYQICR LAY+HN
Sbjct:   25 VDWLSRDMLEMKIRDKTEADEERDSEPDIIDGVGAEPGHVITTTLPGRNGQSRQTVSYIAEHVVGTGSFGMVFQAKCRETGEVVAIKKVLQDKRYKNRELQIMQMLDHPNVVCLKHSFYSRTENEEVYLNLVLEFVPETVNRTARSYSRMNQLMPLIYVKLYTYQICRGLAYLHN 199          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: MSK1_MEDSA (Glycogen synthase kinase-3 homolog MsK-1 OS=Medicago sativa GN=MSK-1 PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 1.149e-57
Identity = 110/173 (63.58%), Postives = 133/173 (76.88%), Query Frame = 3
Query:  279 DWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            D L  EM +M++RD      DR+ E  ++DG G ETGH+I TTIGGRNG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN+V+LKHCFFSTT+K              TV+R+ ++YS+++QRMP+IYVKLYTYQI RAL+YIH
Sbjct:   25 DILPEEMSDMKIRD------DREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIH 191          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: MSK3_MEDSA (Glycogen synthase kinase-3 homolog MsK-3 OS=Medicago sativa GN=MSK-3 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.560e-57
Identity = 111/176 (63.07%), Postives = 136/176 (77.27%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEP-DIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            V+ L  EM +M++RD      D++ E   I+DG G ETGH+I TTIGG+NG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN+V+LKHCFFSTT+K              TV+R+ R+Y++++QRMP+IYVKLY+YQICRALAYIHN
Sbjct:   22 VEKLPEEMNDMKIRD------DKEMEAATIVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVSRVIRHYNKMNQRMPMIYVKLYSYQICRALAYIHN 191          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.560e-57
Identity = 110/175 (62.86%), Postives = 132/175 (75.43%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            VD L  E+L MR++D      D++ E  ++DG   E GHVI TTIGG+NG  KQ +SY+AE  VG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN+V LKHCFFSTT+K              TV+R+ R+YS+++QRMPLIYVKLY+YQICR+LAYIHN
Sbjct:   23 VDKLPDEILGMRIKD------DKEMEAHVVDGNSTEAGHVIVTTIGGKNGQPKQTISYMAERAVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVTLKHCFFSTTEKDELYLNLVLEFVPETVHRVIRHYSKMNQRMPLIYVKLYSYQICRSLAYIHN 191          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG1_ARATH (Shaggy-related protein kinase alpha OS=Arabidopsis thaliana GN=ASK1 PE=2 SV=3)

HSP 1 Score: 221.861 bits (564), Expect = 3.344e-57
Identity = 109/174 (62.64%), Postives = 134/174 (77.01%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            VD L  EM +M++RD      D++ E  ++DG G ETGH+I TTIGGRNG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQD+RYKNRELQ M++LDHPN+V+LKHCFFSTT+K              TV+R+ ++Y++++QRMPLIYVKLYTYQI RAL+YIH
Sbjct:   18 VDKLPEEMNDMKIRD------DKEMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLIYVKLYTYQIFRALSYIH 185          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG5_ARATH (Shaggy-related protein kinase epsilon OS=Arabidopsis thaliana GN=ASK5 PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 9.728e-57
Identity = 105/165 (63.64%), Postives = 129/165 (78.18%), Query Frame = 3
Query:  303 EMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            EM+++D      D++ E  ++DG G ETGH+I TTIGG+NG  KQ +SY+AE +VG GSFG+VFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN+V+LKHCFFSTT+K              TV R++++YSR +QRMP+IYVKLYTYQICRALAYIH
Sbjct:   32 EMKIKD------DKEMEAAVVDGNGTETGHIIVTTIGGKNGQPKQTISYMAERIVGQGSFGIVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVYRVSKHYSRANQRMPIIYVKLYTYQICRALAYIH 190          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: MSK1_TOBAC (Shaggy-related protein kinase NtK-1 OS=Nicotiana tabacum GN=NTK-1 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.830e-56
Identity = 109/175 (62.29%), Postives = 133/175 (76.00%), Query Frame = 3
Query:  276 VDWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIHN 800
            VD L  EM +MR+RD      D++ E  I+DG G ETGH+I TTIGGR+G  KQ +SY+AE +VG GSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQ M++LDHPN+V LKHCFFSTT+K              TV+R+ ++Y++++QRMPLI VKLYTYQI RAL+YIH+
Sbjct:   22 VDRLPEEMNDMRIRD------DKEIEAAIVDGNGTETGHIIVTTIGGRHGQPKQTISYMAERIVGQGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVCLKHCFFSTTEKDEVYLNLVLEYVPETVHRVIKHYNKLNQRMPLILVKLYTYQIFRALSYIHH 190          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG8_ARATH (Shaggy-related protein kinase theta OS=Arabidopsis thaliana GN=ASK8 PE=2 SV=3)

HSP 1 Score: 213.001 bits (541), Expect = 1.553e-54
Identity = 104/174 (59.77%), Postives = 133/174 (76.44%), Query Frame = 3
Query:  279 DWLGREMLEMRLRDQVD-NDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            D L   M+EM++RD+ + N ED+D E  +++G G ETG VI TT+GGR+G  KQ +SY+A+ VVGTGSFGVVFQAKC ETGE VAIKKVLQDKRYKNRELQIM++ DHPN+V L+H FFSTTDK              TV R +++Y++++Q MP+I+V+LYTYQICRAL Y+H
Sbjct:   81 DQLPDVMIEMKIRDERNANREDKDMETTVVNGSGTETGQVITTTVGGRDGKPKQTISYMAQRVVGTGSFGVVFQAKCLETGEQVAIKKVLQDKRYKNRELQIMRLQDHPNVVRLRHSFFSTTDKDELYLNLVLEYVPETVYRASKHYTKMNQHMPIIFVQLYTYQICRALNYLH 254          
BLAST of CF836017 vs. ExPASy Swiss-Prot
Match: KSG3_ARATH (Shaggy-related protein kinase gamma OS=Arabidopsis thaliana GN=ASK3 PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 2.028e-54
Identity = 104/173 (60.12%), Postives = 132/173 (76.30%), Query Frame = 3
Query:  279 DWLGREMLEMRLRDQVDNDEDRDSEPDIIDGVGAETGHVIRTTIGGRNGNSKQKVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKXXXXXXXXXXXXXXTVNRIARNYSRIHQRMPLIYVKLYTYQICRALAYIH 797
            D L  EM +M+++D      D++ E  I++G   ETGH+I TTIGGRNG  KQ +SY+AE VVG GSFGVVFQAKC ETGE VAIKKVLQD+RYKNRELQ M++LDHPN+V+LKHCFFSTT+K              TV+R+ ++Y++++QRMPL+YVKLYTYQI R+L+YIH
Sbjct:   23 DRLPEEMKDMKIQD------DKEMEATIVNGNVTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDRRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYNKLNQRMPLVYVKLYTYQIFRSLSYIH 189          
The following BLAST results are available for this feature:
BLAST of CF836017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
KSG10_ARATH1.398e-7174.86Shaggy-related protein kinase kappa OS=Arabidopsis... [more]
KSG4_ARATH4.068e-7173.71Shaggy-related protein kinase delta OS=Arabidopsis... [more]
MSK1_MEDSA1.149e-5763.58Glycogen synthase kinase-3 homolog MsK-1 OS=Medica... [more]
MSK3_MEDSA2.560e-5763.07Glycogen synthase kinase-3 homolog MsK-3 OS=Medica... [more]
MSK2_MEDSA2.560e-5762.86Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG1_ARATH3.344e-5762.64Shaggy-related protein kinase alpha OS=Arabidopsis... [more]
KSG5_ARATH9.728e-5763.64Shaggy-related protein kinase epsilon OS=Arabidops... [more]
MSK1_TOBAC2.830e-5662.29Shaggy-related protein kinase NtK-1 OS=Nicotiana t... [more]
KSG8_ARATH1.553e-5459.77Shaggy-related protein kinase theta OS=Arabidopsis... [more]
KSG3_ARATH2.028e-5460.12Shaggy-related protein kinase gamma OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E13_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836017 ID=CF836017; Name=CF836017; organism=Citrus sinensis; type=EST; length=801bp
TTTAATTGCTTCCATTTTCATCTCATAAGCGTTCAAATTTTGTGAAGCTG
AAAGCTGCAGAATGCGTGGAATTTGCTTCCACTTCTCGTTCAAGCGCTTC
CAGGAAGATAGGTGTTTGGGTGGTACAGAAGGCACGACCTCAGAGCATCT
GGAGGGTAGCGAATACTAGTATCTGGAATACTCTCGAGTTTGTATAAATG
GCATCTGCCAGCCTAGGGAATGGGGGAGTGGGCAGTTCCAGGTCTGTTAA
CGGCTTCAAGAGTTCATCAAGTTCGGTTGACTGGTTGGGGAGAGAAATGC
TTGAAATGAGATTGCGGGACCAGGTGGACAATGATGAAGACAGAGATAGT
GAACCAGATATCATTGATGGTGTGGGTGCTGAAACTGGACACGTCATACG
AACAACGATTGGTGGTCGAAATGGCAATTCTAAGCAGAAAGTTAGTTATA
TAGCTGAGCATGTGGTTGGAACTGGTTCTTTTGGTGTTGTCTTTCAAGCA
AAATGTAGAGAAACTGGAGAGATTGTTGCTATCAAGAAGGTTCTCCAAGA
CAAGCGCTATAAGAATAGGGAGTTACAGATTATGCAGATGTTGGACCATC
CAAATATTGTTGCCCTTAAGCATTGTTTCTTTTCAACAACAGACAAGGAA
GAGCTTTACTTGAATCTTGTGCTTGAATATGTTCCTGAAACCGTTAATCG
AATTGCAAGGAACTACAGCAGGATCCACCAGCGGATGCCCTTAATATATG
TTAAACTCTATACCTATCAGATCTGTAGGGCACTTGCTTATATACATAAT
T
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