CF836031

Overview
NameCF836031
Unique NameCF836031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length813
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1145 contig Csv1_Contig1145:1..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.724e-70
Identity = 135/197 (68.53%), Postives = 154/197 (78.17%), Query Frame = -1
Query:  223 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 813
            SV+L+GGPSW V LGRRD RTAN+  A+ +LP+PF+ L  L  +FTNVGLN N DLVALSGAHTFGRAQC+ FS RLFNF+ TGNPDP            +CPQGG+G  +TNLD +TPD FDN+YFSNLQ N GLLQSDQELFST GA TI IVNNFS+N+TAFFESF  SMI MGN+S LTG+ GEIRSNCRR N
Sbjct:  132 SVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVN-DLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLDPTTPDTFDNNYFSNLQTNRGLLQSDQELFSTSGAPTIAIVNNFSANQTAFFESFVQSMINMGNISPLTGSNGEIRSNCRRPN 327          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER54_ARATH (Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=2 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 6.281e-67
Identity = 125/205 (60.98%), Postives = 157/205 (76.59%), Query Frame = -1
Query:  199 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRS 813
            SV+L+GGPSWTV LGRRDG TAN S A+ +LP+PF+ L+ +  +F  VGL   TD+V+LSGAHTFGR QC  F+ RLFNFNGTGNPDP            LCPQ G+ + +TNLDLSTPD FDN+YF+NLQ+NNGLLQSDQELFS  G+ T+PIVN+F+SN+T FFE+F  SMI+MGN+S LTG+ GEIR +C+ VN  + +T +
Sbjct:  139 SVSLAGGPSWTVLLGRRDGLTANLSGANSSLPSPFEGLNNITSKFVAVGLK-TTDVVSLSGAHTFGRGQCVTFNNRLFNFNGTGNPDPTLNSTLLSSLQQLCPQNGSNTGITNLDLSTPDAFDNNYFTNLQSNNGLLQSDQELFSNTGSATVPIVNSFASNQTLFFEAFVQSMIKMGNISPLTGSSGEIRQDCKVVNGQSSATEA 342          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER53_ARATH (Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=1 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 5.878e-65
Identity = 122/199 (61.31%), Postives = 155/199 (77.89%), Query Frame = -1
Query:  217 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 813
            SV+L+GGPSWTV LGRRD  TAN + A+ ++P+P ++L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLFNF+GTGNPDP            LCPQ G+ S +TNLDLSTPD FDN+YF+NLQ+N+GLLQSDQELFST G+ TI IV +F+SN+T FF++FA SMI MGN+S LTG+ GEIR +C++VN +
Sbjct:  138 SVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVNGS 335          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER22_ARATH (Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 2.234e-64
Identity = 128/215 (59.53%), Postives = 151/215 (70.23%), Query Frame = -1
Query:  169 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 813
            SV LSGGP W VPLGRRD   A  +LA+  LP+PF  L  LK  F +VGLN  +DLVALSG HTFGRAQCQF + RL+NFNGT +PDP            LCPQ GNG+VL N D+ TPD FD+ Y++NL+   GL+QSDQELFSTPGADTIP+VN +SS+ + FF +F  +MIRMGNL  LTGTQGEIR NCR VN         +D G+VSSI
Sbjct:  137 SVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFFNLTQLKTAFADVGLNRTSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNSPDPSLNPTYLVELRRLCPQNGNGTVLVNFDVVTPDAFDSQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNQYSSDMSVFFRAFIDAMIRMGNLRPLTGTQGEIRQNCRVVNPRIRVV--ENDDGVVSSI 349          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER3_ARMRU (Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 3.810e-64
Identity = 130/215 (60.47%), Postives = 150/215 (69.77%), Query Frame = -1
Query:  169 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 813
            SV LSGGP W VPLGRRD   A   LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFGRAQCQF + RL+NFNGT  PDP            LCPQ GNG+VL N D+ TP+ FD  Y++NL+   GL+QSDQELFSTPGADTIP+VN +SSN  AFF +F  +MIRMGNL  LTGTQGEIR NCR VN+        +D G+VSSI
Sbjct:  137 SVLLSGGPWWPVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRAQCQFVTPRLYNFNGTNRPDPTLDPTYLVQLRALCPQNGNGTVLVNFDVVTPNTFDRQYYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTFAFFGAFVDAMIRMGNLRPLTGTQGEIRQNCRVVNSR--IRGMENDDGVVSSI 349          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.470e-63
Identity = 120/199 (60.30%), Postives = 152/199 (76.38%), Query Frame = -1
Query:  217 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNAN 813
            SV+L+GGPSWTV LGRRD  TAN + A+  +P+PF+ L  +  +F+ VGLN N DLVALSGAHTFGRA+C  F+ RLFNF+GT  PDP            LCPQ G+ S +TNLDLSTPD FDN+YF+NLQ+NNGLLQSDQELFST G+ TI +V +F+SN+T FF++FA SMI MGN+S LTG+ GEIR +C++V+ +
Sbjct:  108 SVSLTGGPSWTVLLGRRDSLTANLAGANSAIPSPFEGLSNITSKFSAVGLNTN-DLVALSGAHTFGRARCGVFNNRLFNFSGTNGPDPTLNSTLLSSLQQLCPQNGSASTITNLDLSTPDAFDNNYFANLQSNNGLLQSDQELFSTLGSATIAVVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVDGS 305          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 9.385e-63
Identity = 122/198 (61.62%), Postives = 144/198 (72.73%), Query Frame = -1
Query:  220 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNA 813
            SV LSGGPSW VPLGRRD   A   LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFGRA+C F + RL+NFNGT  PDP            LCP+ GNG+VL N D+ TP+ FDN +++NL+   GL+QSDQELFSTPGADTIP+VN +SSN  +FF +FA +MIRMGNL  LTGTQGEIR NCR VN+
Sbjct:  108 SVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNLRNGKGLIQSDQELFSTPGADTIPLVNLYSSNTLSFFGAFADAMIRMGNLRPLTGTQGEIRQNCRVVNS 305          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.731e-62
Identity = 127/215 (59.07%), Postives = 145/215 (67.44%), Query Frame = -1
Query:  169 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNLSTRSSSDGGLVSSI 813
            SV LSGGP W VPLGRRD   A  +LA+  LP+PF TL  LK  F +VGLN  +DLVALSG HTFG+AQCQF + RL+NFNGT  PDP            LCPQ GNG+VL N D  TP  FD  Y++NL    GL+QSDQ LFSTPGADTIP+VN +SSN   FF +F  +MIRMGNL  LTGTQGEIR NCR VN         +D G+VSSI
Sbjct:  137 SVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLLNGKGLIQSDQVLFSTPGADTIPLVNQYSSNTFVFFGAFVDAMIRMGNLKPLTGTQGEIRQNCRVVNPRIRVV--ENDDGVVSSI 349          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.770e-61
Identity = 117/197 (59.39%), Postives = 150/197 (76.14%), Query Frame = -1
Query:  223 VNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGN-GSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGADTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVN 810
            V L+ GPSW V  GR+D  TANRS A+ ++P+PF+TL ++  +FTN G+ D TDLVALSGAHTFGRA+C  F QRLFNFNG+GNPD             +CPQGGN G+  TNLD+STP+ FDNDYF+NLQ+N GLLQ+DQELFST G+ TI IVN ++ ++T FF+ F  SMI++GN+S LTGT G+IR++C+RVN
Sbjct:  129 VVLAKGPSWQVLFGRKDSLTANRSGANSDIPSPFETLAVMIPQFTNKGM-DLTDLVALSGAHTFGRARCGTFEQRLFNFNGSGNPDLTVDATFLQTLQGICPQGGNNGNTFTNLDISTPNDFDNDYFTNLQSNQGLLQTDQELFSTSGSATIAIVNRYAGSQTQFFDDFVSSMIKLGNISPLTGTNGQIRTDCKRVN 324          
BLAST of CF836031 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.402e-58
Identity = 115/202 (56.93%), Postives = 138/202 (68.32%), Query Frame = -1
Query:  211 SVNLSGGPSWTVPLGRRDGRTANRSLADQNLPTPFQTLDLLKGRFTNVGLNDNTDLVALSGAHTFGRAQCQFFSQRLFNFNGTGNPDPXXXXXXXXXXXXLCPQGGNGSVLTNLDLSTPDGFDNDYFSNLQANNGLLQSDQELFSTPGA-DTIPIVNNFSSNETAFFESFAVSMIRMGNLSLLTGTQGEIRSNCRRVNANNL 813
            SVNL+GGPSW VPLGRRD R A   LA+ NLP P  TL  LK  F NVGLN  +DLVALSG HTFG+ QC+F   RL+NF+ TG PDP             CP+ GN SVL + DL TP  FDN Y+ NL+   GL+QSDQELFS+P A DTIP+V +++     FF +F  +M RMGN++ LTGTQGEIR NCR VN+N+L
Sbjct:  117 SVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDFDLRTPTVFDNKYYVNLKEQKGLIQSDQELFSSPNATDTIPLVRSYADGTQTFFNAFVEAMNRMGNITPLTGTQGEIRLNCRVVNSNSL 318          
The following BLAST results are available for this feature:
BLAST of CF836031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER15_IPOBA2.724e-7068.53Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER54_ARATH6.281e-6760.98Peroxidase 54 OS=Arabidopsis thaliana GN=PER54 PE=... [more]
PER53_ARATH5.878e-6561.31Peroxidase 53 OS=Arabidopsis thaliana GN=PER53 PE=... [more]
PER22_ARATH2.234e-6459.53Peroxidase 22 OS=Arabidopsis thaliana GN=PER22 PE=... [more]
PER3_ARMRU3.810e-6460.47Peroxidase C3 OS=Armoracia rusticana GN=PRXC3 PE=3... [more]
PERA2_ARMRU2.470e-6360.30Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PERE5_ARMRU9.385e-6361.62Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER23_ARATH2.731e-6259.07Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]
PERX_TOBAC1.770e-6159.39Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER1C_ARMRU1.402e-5856.93Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02E22_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836031 ID=CF836031; Name=CF836031; organism=Citrus sinensis; type=EST; length=813bp
CCCCTCAGTTTTTTTTTTTTTTTTCCATTTCCAACGGGCTCATAATTTTA
TTCACATTTTGAAAATATTGTTAGGACAAACACGAGACAAGGTACCTTAG
TTTGTTACCCACAAACTCTCAACAGCAAAACTACTTCACACAGTTTTATT
TTATGCTTTCATGATTTAGATAGAGCTGACCAAACCGCCATCTGATGATG
ATCTGGTTGATAAATTGTTTGCATTAACCCTTCTGCAGTTTGACCTGATC
TCTCCTTGAGTCCCTGTTAGAAGGCTTAAATTCCCCATTCTGATCATAGA
AACCGCAAAGCTTTCAAAGAAAGCAGTTTCGTTGCTGCTAAAGTTGTTGA
CAATGGGAATGGTATCGGCGCCGGGTGTCGAAAACAGCTCTTGATCACTC
TGTAAAAGGCCATTGTTAGCTTGAAGATTGGAGAAATAATCGTTGTCAAA
ACCATCCGGTGTTGAGAGATCAAGATTCGTTAGGACGCTGCCATTGCCAC
CTTGCGGGCACAGCTGCTGCAGTTGTGCTAAGAGAGTTGCGTTCAGCGTT
GGGTCTGGATTGCCAGTTCCATTGAAATTGAATAATCTTTGGCTGAAAAA
TTGACACTGTGCCCTTCCAAAAGTGTGAGCGCCGGAGAGTGCAACCAGAT
CAGTATTGTCGTTGAGACCGACATTTGTAAATCTGCCTTTGAGCAAATCA
AGAGTCTGAAATGGTGTTGGAAGATTCTGATCTGCAAGGCTCCTGTTCGC
TGTCCTGCCGTCTCTTCTTCCCAGTGGAACTGTCCATGAAGGACCACCTG
ACAAATTGACGGA
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