CF836087
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFRS2_BOVIN (Splicing factor, arginine/serine-rich 2 OS=Bos taurus GN=SFRS2 PE=2 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 4.494e-21 Identity = 51/103 (49.51%), Postives = 74/103 (71.84%), Query Frame = 2 Query: 59 FGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG--PNAERIQKG 361 +GR PPD+ SL V N+T+RT+ D L +F+KYG+V D++IPRDR T +SRGFAFVR+ +A+ A+D +DG V+DGRE+ VQ A+YG P++ ++G Sbjct: 3 YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRG 104
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: RSP4_CAEEL (Probable splicing factor, arginine/serine-rich 4 OS=Caenorhabditis elegans GN=rsp-4 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.715e-17 Identity = 44/100 (44.00%), Postives = 66/100 (66.00%), Query Frame = 2 Query: 65 RSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG-PNAERIQKG 361 R PDI SL + N++++TT +DL F++YG + D+ IPRD+ + S+GF FVR+ +A+ A+DR DG++VDGRE+ V AKY P+ ER +G Sbjct: 9 RRAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGRELRVTLAKYDRPSDERGGRG 108
BLAST of CF836087 vs. ExPASy Swiss-Prot
Match: SFR2B_HUMAN (Splicing factor, arginine/serine-rich 2B OS=Homo sapiens GN=SFRS2B PE=1 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.145e-16 Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 2 Query: 74 PPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYG 334 PPD+ +L V N+T+RT+ D L +F+KYG+V D++IPR+ T RGFAFVR+ +AQ A +DG +DGRE+ VQ A+YG Sbjct: 7 PPDVDGMITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYG 93 The following BLAST results are available for this feature:
BLAST of CF836087 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836087 ID=CF836087; Name=CF836087; organism=Citrus sinensis; type=EST; length=745bpback to top |