CF836106

Overview
NameCF836106
Unique NameCF836106
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF836106_ssr102 microsatellite CF836106_ssr102:102..122. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1154 contig Csv1_Contig1154:1..569. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP16_ARATH (Serine carboxypeptidase-like 16 OS=Arabidopsis thaliana GN=SCPL16 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 2.585e-48
Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            A S S +K+LPGF+GPLPFELETGY+GVGE  + Q+FYYF+KSE NP+ DPLLLWL+GGPGCS+F+GL YE GP+ F V  YNGS+PTL    YSWTK A+I+++D PVGTG+SY++ PLA    D    ++VD+F  K
Sbjct:   21 ADSSSIIKYLPGFEGPLPFELETGYIGVGEEDEDQMFYYFIKSESNPKTDPLLLWLSGGPGCSSFTGLIYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPLADIPSDTGSAKRVDEFLRK 159          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP15_ARATH (Serine carboxypeptidase-like 15 OS=Arabidopsis thaliana GN=SCPL15 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 7.522e-48
Identity = 85/139 (61.15%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            A S S +++LPGF+GPLPFELETGY+GVG+  + QLFYYF+KSE NP EDPLL+WLTGGPGCS+FSGL YE GP+ F V  YNGS+PTL    YSWTK A+I+++D PVGTG+SY++ P A    D   V++V++F  K
Sbjct:   22 ADSSSIIRYLPGFEGPLPFELETGYIGVGQKEEDQLFYYFIKSENNPEEDPLLVWLTGGPGCSSFSGLVYENGPLAFKVETYNGSVPTLVSTTYSWTKVANIIYLDQPVGTGFSYSRNPFADIPSDTGSVKRVNEFVRK 160          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP4_ARATH (Serine carboxypeptidase-like 4 OS=Arabidopsis thaliana GN=SCPL4 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.368e-47
Identity = 83/137 (60.58%), Postives = 108/137 (78.83%), Query Frame = 1
Query:  151 SYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            S S VKFLPGF+GPLPFELETGY+GVGE  + QLFYYF+KSE+NP+EDPLLLWLTGGPGCSA SGL Y+ GP+   +  YNG+LP+L    YSWTK +S++F+D PVGTG+SY++T L ++  D  + +++ +F  K
Sbjct:   29 SASIVKFLPGFEGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYQNGPLAMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQLFNKPSDTGEAKRIHEFLQK 165          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP6_ARATH (Serine carboxypeptidase-like 6 OS=Arabidopsis thaliana GN=SCPL6 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 8.316e-47
Identity = 83/137 (60.58%), Postives = 107/137 (78.10%), Query Frame = 1
Query:  151 SYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            S S VK LPGF+GPLPFELETGY+GVGE  + QLFYYF+KSE+NP+EDPLLLWLTGGPGCSA SGL YE GP+   +  YNG+LP+L    YSWTK +S++F+D PVGTG+SY++T L ++  D  + +++ +F  K
Sbjct:   29 SASVVKSLPGFEGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPKEDPLLLWLTGGPGCSAISGLLYENGPLTMKLDVYNGTLPSLVSTTYSWTKNSSMIFLDQPVGTGFSYSRTELFNKPSDTGEAKRIHEFLQK 165          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP13_ARATH (Serine carboxypeptidase-like 13 OS=Arabidopsis thaliana GN=SCPL13 PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 8.316e-47
Identity = 83/139 (59.71%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            A S S VKFLPGF+GPLPFELETGY+G+GE  + QLFYYF+KSEKNP EDPLLLWL+GGPGCS+ +GL +E GP+      YNGS+P+L    YSWTK A+I+F+D PVG+G+SY++TPL  +  D  +V+++ +F  K
Sbjct:   20 AHSGSIVKFLPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSEKNPEEDPLLLWLSGGPGCSSLTGLLFENGPVALKFEVYNGSVPSLVSTTYSWTKMANIIFLDQPVGSGFSYSRTPLVDKISDTGEVKRIYEFLQK 158          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP19_ARATH (Serine carboxypeptidase-like 19 OS=Arabidopsis thaliana GN=SCPL19 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.086e-46
Identity = 82/130 (63.08%), Postives = 104/130 (80.00%), Query Frame = 1
Query:  163 VKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQF 552
            VK LPGF+GPLPFELETGYV +GESGD +LFYYFVKSE+NP  DPL++WLTGGPGCS+  GL +  GP+ F   EYNG++P L L  +SWTK A+IL++++P G+GYSYAKT  A ++ D KQ+ Q+DQF
Sbjct:   27 VKSLPGFEGPLPFELETGYVSIGESGDVELFYYFVKSERNPENDPLMIWLTGGPGCSSICGLLFANGPLAFKGDEYNGTVPPLELTSFSWTKVANILYLEAPAGSGYSYAKTRRAFESSDTKQMHQIDQF 156          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP14_ARATH (Serine carboxypeptidase-like 14 OS=Arabidopsis thaliana GN=SCPL14 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.086e-46
Identity = 81/139 (58.27%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  145 AASYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            A S S +K+LPGF+GPLPFELETGY+GVG+  + Q+FYYF+KSE NP EDPLL+WL+GGPGCS+F+GL YE GP+ F V  YNGS+PTL    YSWTK A+I+++D PVG G+SY++ P A +  D    + V++F  K
Sbjct:   21 ADSSSIIKYLPGFEGPLPFELETGYIGVGDEDEDQMFYYFIKSESNPEEDPLLVWLSGGPGCSSFTGLVYENGPLGFKVEAYNGSIPTLVSTTYSWTKVANIIYLDQPVGAGFSYSRNPFADRPSDTGSAKLVNEFVRK 159          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP7_ARATH (Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.853e-46
Identity = 82/137 (59.85%), Postives = 107/137 (78.10%), Query Frame = 1
Query:  151 SYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            S S VK LPGF GPLPFELETGY+GVGE  + QLFYYF+KSE+NP+EDPLLLWL+GGPGCS+ SGL YE GP+N  +  YNG+LP+L    YSWTK +SI+++D PVGTG+SY++T L ++  D  + +++ +F  K
Sbjct:   25 SASIVKSLPGFDGPLPFELETGYIGVGEEEEVQLFYYFIKSERNPQEDPLLLWLSGGPGCSSISGLLYENGPVNVKIEVYNGTLPSLVSTTYSWTKVSSIIYLDQPVGTGFSYSRTKLVNKPSDSGEAKRIHEFLHK 161          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP17_ARATH (Serine carboxypeptidase-like 17 OS=Arabidopsis thaliana GN=SCPL17 PE=2 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 7.040e-46
Identity = 84/137 (61.31%), Postives = 105/137 (76.64%), Query Frame = 1
Query:  151 SYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            S ST++FLPGFQGPLPFELETGY+GVGE+   Q+FYYF+KSE NP +DPLLLWL+GGP CS+F+ L YE GPI F   EYNGS+P+L    Y+WTK ASIL++D PVGTG+SY++ PLA    D    + V++F  K
Sbjct:   26 SGSTIRFLPGFQGPLPFELETGYIGVGEAEKDQMFYYFIKSESNPEKDPLLLWLSGGPFCSSFTALIYENGPIAFKAEEYNGSIPSLVSTTYAWTKVASILYLDQPVGTGFSYSRNPLADIPSDTGVAKPVNEFLHK 162          
BLAST of CF836106 vs. ExPASy Swiss-Prot
Match: SCP2_ARATH (Serine carboxypeptidase-like 2 OS=Arabidopsis thaliana GN=SCPL2 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.201e-45
Identity = 79/137 (57.66%), Postives = 107/137 (78.10%), Query Frame = 1
Query:  151 SYSTVKFLPGFQGPLPFELETGYVGVGESGDAQLFYYFVKSEKNPREDPLLLWLTGGPGCSAFSGLAYEIGPINFNVVEYNGSLPTLHLNPYSWTKEASILFVDSPVGTGYSYAKTPLASQAGDFKQVQQVDQFSSK 561
            S S VKFLPGF+GPLPFELETGY+G+GE  + QLFYYF+KSE+NP+EDPL+LWLTGGPGCS+ SGL +E GP+   +  YNG+LP+L    YSWTK +S++F+D PVGTG+SY++T   ++  D  + +++ +F  K
Sbjct:   29 SASIVKFLPGFEGPLPFELETGYIGIGEEEEVQLFYYFIKSERNPKEDPLILWLTGGPGCSSISGLLFENGPLTMKLDVYNGTLPSLVSTTYSWTKTSSMIFLDQPVGTGFSYSRTQQFNKPSDSGEAKRIHEFLQK 165          
The following BLAST results are available for this feature:
BLAST of CF836106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
SCP16_ARATH2.585e-4861.15Serine carboxypeptidase-like 16 OS=Arabidopsis tha... [more]
SCP15_ARATH7.522e-4861.15Serine carboxypeptidase-like 15 OS=Arabidopsis tha... [more]
SCP4_ARATH6.368e-4760.58Serine carboxypeptidase-like 4 OS=Arabidopsis thal... [more]
SCP6_ARATH8.316e-4760.58Serine carboxypeptidase-like 6 OS=Arabidopsis thal... [more]
SCP13_ARATH8.316e-4759.71Serine carboxypeptidase-like 13 OS=Arabidopsis tha... [more]
SCP19_ARATH1.086e-4663.08Serine carboxypeptidase-like 19 OS=Arabidopsis tha... [more]
SCP14_ARATH1.086e-4658.27Serine carboxypeptidase-like 14 OS=Arabidopsis tha... [more]
SCP7_ARATH1.853e-4659.85Serine carboxypeptidase-like 7 OS=Arabidopsis thal... [more]
SCP17_ARATH7.040e-4661.31Serine carboxypeptidase-like 17 OS=Arabidopsis tha... [more]
SCP2_ARATH1.201e-4557.66Serine carboxypeptidase-like 2 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02G20_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02G20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836106 ID=CF836106; Name=CF836106; organism=Citrus sinensis; type=EST; length=569bp
TGAAGATTGTTCCCTAGTTGTTTCTCAAAGAAACTGGTTGGTTAAGACTT
AACATGCTGGAAAAGCCGAAAACAAACGCCAATGGACAAGCTTTGTTTTC
CTCTTCTTCTTCTTCTTCTTCTTGTACAGCTTTGCATGCAGCTTGCAGCT
TCTTACTCAACTGTTAAATTTCTTCCGGGATTCCAGGGCCCCCTCCCCTT
TGAACTTGAAACTGGGTATGTAGGAGTAGGTGAGTCGGGGGACGCACAGC
TCTTCTATTACTTTGTGAAGTCGGAGAAAAATCCAAGAGAGGACCCTCTC
TTGCTTTGGCTTACTGGTGGCCCTGGCTGCTCTGCCTTCTCAGGTCTTGC
TTATGAAATTGGTCCAATAAATTTCAACGTAGTGGAGTACAACGGGAGCT
TGCCTACTTTGCACTTGAATCCCTACTCATGGACAAAGGAAGCCAGCATA
TTATTTGTGGATTCGCCTGTTGGCACTGGATATTCCTACGCAAAAACCCC
ACTTGCCTCTCAAGCCGGTGACTTCAAACAAGTTCAGCAGGTTGACCAAT
TTTCTTCGAAAGTGGCTAT
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