CF836125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNGC4_ARATH (Cyclic nucleotide-gated ion channel 4 OS=Arabidopsis thaliana GN=CNGC4 PE=2 SV=2) HSP 1 Score: 306.605 bits (784), Expect = 7.514e-83 Identity = 151/192 (78.65%), Postives = 159/192 (82.81%), Query Frame = -3 Query: 92 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPNQDDFD 667 DDLVLENICDRVKSLIFTKGE I KEGD VQRMLFVVRGHLQSSQ+L + +KSCCMLGPGNFSGDELLSWCLRRPF+ER EAFGL+AEDVKYVTQHFRYTFV EKVKRSARYYSPGWRTWAAVA+QLAWRRYKHRLTLTSLSFI LGED+LRLY A+LTSPKPN DDFD Sbjct: 501 DDLVLENICDRVKSLIFTKGETIQKEGDAVQRMLFVVRGHLQSSQLLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLDAEDVKYVTQHFRYTFVNEKVKRSARYYSPGWRTWAAVAVQLAWRRYKHRLTLTSLSFIRPRRPLSRCASLGEDKLRLYAAILTSPKPNPDDFD 692
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNGC2_ARATH (Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis thaliana GN=CNGC2 PE=1 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.532e-43 Identity = 86/187 (45.99%), Postives = 115/187 (61.50%), Query Frame = -3 Query: 107 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIXXXXXXXXXXXLGEDRLRLYTALLTSPKPN 667 DDL+L+NICDR K +F+K E I +EGDPVQRM+F++RG ++ Q L + + L PG + GDELLSWCLRRPF++R EAF L +ED++Y+T HFRY F E++KR+ARYYS WRTWAAV IQ+AWRR + R ++ E RL Y A+ S +P+ Sbjct: 536 DDLILDNICDRAKPRVFSKDEKIIREGDPVQRMIFIMRGRVKRIQSLSKGVLATSTLEPGGYLGDELLSWCLRRPFLDRLPPSSATFVCLENIEAFSLGSEDLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQMAWRRRRKRTRGENIGGSMSPVSENSIEGNSERRLLQYAAMFMSIRPH 722
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25 Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = -3 Query: 206 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQS--SQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSL 667 D+ +L+ IC+R+K + T+G + +EGDPV MLF++RGHL S + + C++GPG+F G+ELL+W L + EAF L+AED+++V FR K+ ++ R+YS WRTWAA IQ AWRR++ R T L Sbjct: 476 DERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCLIGPGDFCGEELLTWALDPRPVVILPSSTRTVKAICEVEAFALKAEDLQFVASQFRRLHTKQ-LRHKFRFYSHQWRTWAACFIQAAWRRHRKRKYKTEL 630
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNG14_ARATH (Probable cyclic nucleotide-gated ion channel 14 OS=Arabidopsis thaliana GN=CNGC14 PE=2 SV=2) HSP 1 Score: 115.546 bits (288), Expect = 2.457e-25 Identity = 65/157 (41.40%), Postives = 88/157 (56.05%), Query Frame = -3 Query: 203 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQIL--HNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLS 667 DD +L+ IC+R+ S + T+G I +EGDPV MLF++RG L+SS + L PG+F G+ELL+W L EAF L+A D+K+V FR K K++ + RYYS WRTWAA +Q+AWRRYK + SLS Sbjct: 486 DDQLLDAICERLASSLSTQGNYIVREGDPVTEMLFIIRGKLESSTTNGGRTGFFNSITLRPGDFCGEELLAWALLPKSTVNLPSSTRTVRALEEVEAFALQAGDLKFVANQFRRLHSK-KLQHTFRYYSHQWRTWAACFVQVAWRRYKRKKLAKSLS 641
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNG17_ARATH (Probable cyclic nucleotide-gated ion channel 17 OS=Arabidopsis thaliana GN=CNGC17 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.080e-24 Identity = 64/159 (40.25%), Postives = 89/159 (55.97%), Query Frame = -3 Query: 197 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQIL--HNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFI 667 DD +L+ IC+R+ S + T+G + +EGD + MLF++RG L+SS + +L PG+F G+ELLSW L EAF L AED+K+V FR K K++ + R+YS WRTWAA IQ AWRRYK R+ +L+ I Sbjct: 486 DDQLLDAICERLVSSLCTEGTYLVREGDLISEMLFIIRGRLESSTTNGGRTGFFNSIILRPGDFCGEELLSWALLPKSTLNLPSSTRTVRALVEVEAFALRAEDLKFVANQFRRLHSK-KLQHTFRFYSHHWRTWAACFIQAAWRRYKRRVMENNLTAI 643
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.336e-22 Identity = 61/157 (38.85%), Postives = 82/157 (52.23%), Query Frame = -3 Query: 203 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQIL--HNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLS 667 DD +L+ IC + S + T G I +EGDPV MLFV+RG ++SS + + L PG+F G+ELL+W L EAF L AED+K+V F+ +K++ + RYYS WR W A +Q AWRRYK R LS Sbjct: 454 DDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNSTTLRPGDFCGEELLTWALMPNSTLNLPSSTRSVRALSEVEAFALSAEDLKFVAHQFK-RLQSKKLQHAFRYYSHQWRAWGACFVQSAWRRYKRRKLAKELS 609
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 5.663e-22 Identity = 57/150 (38.00%), Postives = 86/150 (57.33%), Query Frame = -3 Query: 224 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQS--SQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR 667 D+ +L+ IC+R+K +FT+ I +EGDPV M+F++RG L+S + + + +L G+F G+ELL+W L EAF LEAE++K+V FR ++ V+++ R+YS WRTWA+ IQ AWRRY R Sbjct: 507 DERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQ-VQQTFRFYSQQWRTWASCFIQAAWRRYSRR 655
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNG16_ARATH (Probable cyclic nucleotide-gated ion channel 16 OS=Arabidopsis thaliana GN=CNGC16 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 58/150 (38.67%), Postives = 79/150 (52.67%), Query Frame = -3 Query: 224 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQSSQI--LHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR 667 DD +L+ IC+R+ + TK + +EGDPV MLF++RG ++SS + + L PG+F G+ELL+W L EAF L AED+K+V FR K K++ + RYYS WR W IQ AWRRY R Sbjct: 462 DDQLLDAICERLVPSLNTKDTYVIREGDPVNEMLFIIRGQMESSTTDGGRSGFFNSITLRPGDFCGEELLTWALVPNINHNLPLSTRTVRTLSEVEAFALRAEDLKFVANQFRRLHSK-KLQHAFRYYSHQWRAWGTCFIQAAWRRYMKR 610
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21 Identity = 57/150 (38.00%), Postives = 86/150 (57.33%), Query Frame = -3 Query: 224 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQS--SQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHR 667 D+ +L+ IC+R+K ++T+ I +EGDPV MLF++RG L+S + + + +L G+F G+ELL+W L EAF LEAE++K+V FR ++ V+++ R+YS WRTWAA IQ AWRR+ R Sbjct: 513 DERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFNRGLLKEGDFCGEELLTWALDPKAGSNLPSSTRTVKALTEVEAFALEAEELKFVASQFRRLHSRQ-VQQTFRFYSQQWRTWAACFIQAAWRRHLRR 661
BLAST of CF836125 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21 Identity = 58/156 (37.18%), Postives = 86/156 (55.13%), Query Frame = -3 Query: 206 DDLVLENICDRVKSLIFTKGEVITKEGDPVQRMLFVVRGHLQS--SQILHNNIKSCCMLGPGNFSGDELLSWCLRRPFIERXXXXXXXXXXXXXXEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSL 667 D+ +L+ IC+R+K +FT+ + +EGDPV MLF++RG L+S + + + +L G+F GDELL+W L EAF L A+++K+V FR ++ V+ + R+YS WRTWAA +Q AWRRY R L L Sbjct: 519 DERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLPSSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQ-VQHTFRFYSQQWRTWAACFMQAAWRRYIKRKKLEQL 673 The following BLAST results are available for this feature:
BLAST of CF836125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836125 ID=CF836125; Name=CF836125; organism=Citrus sinensis; type=EST; length=669bpback to top |