CF836130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA1_ORYSJ (Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica GN=IAA1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 2.340e-48 Identity = 99/150 (66.00%), Postives = 117/150 (78.00%), Query Frame = -3 Query: 214 SSNDNKHCEEND---AMASTTTPATKAQVVGWPPVRAYRKNAMKGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALED-MFSFLTIRNHVN-ERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPR 648 SS+D +N A A+ PA KA+VVGWPPVR++RKNA+ + KFVKVAV+GAPYLRKVDLE Y Y +LL AL+D FS TIR + ERK++D VNG EYVPTYEDKDGDWMLVGDVPWKMFVE+C+R+RLMKSSEA+ LAPR Sbjct: 49 SSSDAADAADNSSPLAAAADAPPAPKARVVGWPPVRSFRKNAL--AAKFVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFADDERKLVDAVNGTEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPR 196
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA15_ORYSJ (Auxin-responsive protein IAA15 OS=Oryza sativa subsp. japonica GN=IAA15 PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 2.860e-46 Identity = 95/156 (60.90%), Postives = 117/156 (75.00%), Query Frame = -3 Query: 211 SSSNDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAM-------KGSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALED-MFSFLTIRNHVNER-KIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRT 651 +S+ D+ + A+ + P+ KA+VVGWPPVRA+RKNA+ KFVKVAV+GAPYLRKVDLE Y Y +LL+AL+D FS TIR NE K++D V+G EYVPTYEDKDGDWMLVGDVPWKMFVE+C+R+RLMKSSEA+ LAPR+ Sbjct: 56 ASATDDDPDNRLGSTATESPPSPKARVVGWPPVRAFRKNALAALAAASSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQDKFFSHFTIRKLGNEEMKLVDAVSGNEYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLAPRS 211
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA17_ARATH (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana GN=IAA17 PE=1 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 6.043e-45 Identity = 89/153 (58.17%), Postives = 109/153 (71.24%), Query Frame = -3 Query: 187 PATKAQVVGWPPVRAYRKNAMKGSCK---------FVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH---------VNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 591 P KAQVVGWPPVR+YRKN M K FVKV+++GAPYLRK+DL +Y SY EL +AL +MFS T+ H +NERK++D VN +YVP+YEDKDGDWMLVGDVPW MFV++CKR+RLMK S+AIGLAPR K S++ Sbjct: 77 PPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPEAAAFVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEGMIDFMNERKLMDLVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLAPRAMEKCKSRA 229 HSP 2 Score: 25.409 bits (54), Expect = 6.043e-45 Identity = 11/14 (78.57%), Postives = 11/14 (78.57%), Query Frame = -2 Query: 656 GRKRGFLETVDLNL 697 G KRGF ETVDL L Sbjct: 29 GNKRGFSETVDLKL 42
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA14_ARATH (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana GN=IAA14 PE=1 SV=2) HSP 1 Score: 175.637 bits (444), Expect = 1.026e-44 Identity = 92/175 (52.57%), Postives = 115/175 (65.71%), Query Frame = -3 Query: 187 NDNKHCEENDAMASTTTPATKAQVVGWPPVRAYRKNAMK---------------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH--------VNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 642 N N +E + + P KAQVVGWPPVR YRKN M G+ FVKV+++GAPYLRKVDL++Y SY++L AL MFS T+ ++ +NE K++D +N EYVP+YEDKDGDWMLVGDVPW MFVESCKR+R+MK SEAIGLAPR K ++S Sbjct: 54 NTNGAPKEKTFLKDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSYGAQGMIDFMNESKVMDLLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKNRS 228 HSP 2 Score: 25.7942 bits (55), Expect = 1.026e-44 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 656 RTKAGRKRGFLETVDLNL 709 ++ G KRGF ETVDL L Sbjct: 24 KSGVGNKRGFSETVDLKL 41
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.112e-43 Identity = 89/172 (51.74%), Postives = 113/172 (65.70%), Query Frame = -3 Query: 187 PATKAQVVGWPPVRAYRKNAMKG-----------------------------SCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH--------VNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 591 P KAQVVGWPPVR++RKN M G + +VKV+++GAPYLRK+DL++Y +YQ+L +AL MFS TI N+ +NE K+ID +NG +YVPTYEDKDGDWMLVGDVPW+MFV+SCKR+R+MK SEAIGLAPR K ++S Sbjct: 65 PPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGMKDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236 HSP 2 Score: 23.483 bits (49), Expect = 1.112e-43 Identity = 11/16 (68.75%), Postives = 11/16 (68.75%), Query Frame = -2 Query: 656 KAGRKRGFLETVDLNL 703 K KRGF ETVDL L Sbjct: 25 KNNGKRGFSETVDLKL 40
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 1.329e-43 Identity = 96/162 (59.26%), Postives = 111/162 (68.52%), Query Frame = -3 Query: 187 ATKAQVVGWPPVRAYRKNAM-----KG----------------SCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRN-------HVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 588 A KAQVVGWPPVR+YRKN + KG + FVKV+++GAPYLRKVDL++Y SY EL ALE MFS TI N +NE KI D +NG EYVPTYEDKDGDWMLVGDVPW+MFVESCKR+R+MK SEAIGLAPR K ++S Sbjct: 116 APKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNGMNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.469e-42 Identity = 91/173 (52.60%), Postives = 114/173 (65.90%), Query Frame = -3 Query: 187 ASTTTPATKAQVVGWPPVRAYRKNAMKGS-----------------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI----------RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 606 +S T PA+KAQVVGWPP+R++RKN+M S C +VKV++EGAPYLRK+DL+ Y SY EL SALE MFS TI R+ +NE ++ D + G EYV TYEDKD DWMLVGDVPW+MF+ SCK++R+MKSSEAIGLAPR K S++ Sbjct: 133 SSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA7_ARATH (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana GN=IAA7 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 7.682e-42 Identity = 87/172 (50.58%), Postives = 108/172 (62.79%), Query Frame = -3 Query: 202 EENDAMASTTTPATKAQVVGWPPVRAYRKNAMK-----------------------GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTIRNH--------VNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAK 624 +E + + P KAQVVGWPPVR YRKN M VKV+++GAPYLRKVDL++Y SYQ+L AL MFS T+ N+ +NE K+++ +N EYVP+YEDKDGDWMLVGDVPW+MFVESCKR+R+MK SEA+GLAPR K Sbjct: 66 KEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNFGGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTMGNYGAQGMIDFMNESKLMNLLNSSEYVPSYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAVGLAPRAMEK 237 HSP 2 Score: 25.0238 bits (53), Expect = 7.682e-42 Identity = 11/18 (61.11%), Postives = 13/18 (72.22%), Query Frame = -2 Query: 656 RTKAGRKRGFLETVDLNL 709 ++ G KRGF ETVDL L Sbjct: 29 KSAVGSKRGFSETVDLML 46
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA23_ORYSJ (Auxin-responsive protein IAA23 OS=Oryza sativa subsp. japonica GN=IAA23 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.770e-41 Identity = 87/143 (60.84%), Postives = 102/143 (71.33%), Query Frame = -3 Query: 202 ASTTTPATKAQVVGWPPVRAYRKNAMK---GSCKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMF-SFLTIRN----HVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAK 606 A P+ KA+ VGWPPVRAYR+NA++ K VKVAV+GAPYLRKVDL + Y LL AL MF S L +R K++D V G EYVPTYEDKDGDWMLVGDVPWKMFVESCKR+RLMKSSEA+ L+PR ++ Sbjct: 51 ADAKPPSPKARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMKSSEAVNLSPRRSSR 193
BLAST of CF836130 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 164.851 bits (416), Expect = 4.000e-40 Identity = 84/175 (48.00%), Postives = 115/175 (65.71%), Query Frame = -3 Query: 187 EENDAMASTTTPATKAQVVGWPPVRAYRKN-------AMKGS------------CKFVKVAVEGAPYLRKVDLEIYHSYQELLSALEDMFSFLTI----------RNHVNERKIIDNVNGVEYVPTYEDKDGDWMLVGDVPWKMFVESCKRVRLMKSSEAIGLAPRTPAKNSSKS 624 EE + PA KAQVVGWPP+R+YRKN A+KG C +VKV+++GAPYLRKVDL++Y +Y+EL ALE MFS T+ R+ +++ +++D NG E V TYEDKD DWMLVGDVPW+MF +SC+R+R+MK S+A+GLAPR K+ +++ Sbjct: 92 EEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266 The following BLAST results are available for this feature:
BLAST of CF836130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF836130 ID=CF836130; Name=CF836130; organism=Citrus sinensis; type=EST; length=716bpback to top |