CF836133

Overview
NameCF836133
Unique NameCF836133
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2224 contig Csv1_Contig2224:7..727. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH23_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS=Arabidopsis thaliana GN=XTH23 PE=2 SV=1)

HSP 1 Score: 367.851 bits (943), Expect = 3.161e-101
Identity = 167/215 (77.67%), Postives = 195/215 (90.70%), Query Frame = 1
Query:   73 MAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYK 717
            MA     T+++++  S ++ + ++NF +D +ITWGDGRG+I NNG LL+LSLDKASGSGFQSK+EYLFGKIDMQ+KLV GNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFT GKGDREQQF LWFDPT+DFHTYS+LWNPQRI+F VDG+PIREFKN+ES G LFPKNQPMR+YSSLWNA++WATRGGL+KTDW++APFTASY+
Sbjct:    1 MAMISYSTIVVALLASFMICSVSANFQRDVEITWGDGRGQITNNGDLLTLSLDKASGSGFQSKNEYLFGKIDMQIKLVAGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTQGKGDREQQFKLWFDPTSDFHTYSILWNPQRIIFSVDGTPIREFKNMESQGTLFPKNQPMRMYSSLWNAEEWATRGGLVKTDWSKAPFTASYR 215          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH25_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS=Arabidopsis thaliana GN=XTH25 PE=2 SV=2)

HSP 1 Score: 355.14 bits (910), Expect = 2.121e-97
Identity = 166/221 (75.11%), Postives = 187/221 (84.62%), Query Frame = 1
Query:   58 IDCSTMAYSKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            +D ST   S  FTL +S   +      A  F  +FDITWGDGRGK+LNNG+LL+LSLD+ASGSGFQ+K EYLFGKIDMQLKLVPGNSAGTVTAYYLKS G TWDEIDFEFLGNL+GDPYT+HTNV+T GKGDREQQFHLWFDPTADFHTYSVLWNP  IVF VD  P+REFKNL+  G+ +PK QPMR+YSSLWNAD WATRGGL+KTDW++APFTASY+N
Sbjct:    1 MDRSTFILSLLFTLTVSTT-TLFSPVFAGTFDTEFDITWGDGRGKVLNNGELLTLSLDRASGSGFQTKKEYLFGKIDMQLKLVPGNSAGTVTAYYLKSKGDTWDEIDFEFLGNLTGDPYTMHTNVYTQGKGDREQQFHLWFDPTADFHTYSVLWNPHHIVFMVDDIPVREFKNLQHMGIQYPKLQPMRLYSSLWNADQWATRGGLVKTDWSKAPFTASYRN 220          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH24_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 24 OS=Arabidopsis thaliana GN=XTH24 PE=1 SV=2)

HSP 1 Score: 353.984 bits (907), Expect = 4.724e-97
Identity = 163/210 (77.62%), Postives = 188/210 (89.52%), Query Frame = 1
Query:   91 FTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            FT L+  A S     SA++F  D ++ WG+GRGKILNNGQLL+LSLDK+SGSGFQSK+EYLFGKIDMQ+KLVPGNSAGTVT +YLKS GSTWDEIDFEFLGN+SGDPYTLHTNV+T GKGD+EQQFHLWFDPTA+FHTYS+LWNPQRI+  VD +PIREFKN ES GVLFPKN+PMR+Y+SLWNADDWATRGGL+KTDW++APF ASY+N
Sbjct:    9 FTTLLVAAFS----VSAADFNTDVNVAWGNGRGKILNNGQLLTLSLDKSSGSGFQSKTEYLFGKIDMQIKLVPGNSAGTVTTFYLKSEGSTWDEIDFEFLGNMSGDPYTLHTNVYTQGKGDKEQQFHLWFDPTANFHTYSILWNPQRIILTVDDTPIREFKNYESLGVLFPKNKPMRMYASLWNADDWATRGGLVKTDWSKAPFMASYRN 214          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH22_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 22 OS=Arabidopsis thaliana GN=XTH22 PE=1 SV=1)

HSP 1 Score: 351.673 bits (901), Expect = 2.344e-96
Identity = 159/209 (76.08%), Postives = 190/209 (90.91%), Query Frame = 1
Query:   94 TLLISIAISSLMVASAS-NFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYK 717
            T L+ + +S ++ +S S NF +D +ITWGDGRG+I NNG+LL+LSLDK+SGSGFQSK+EYLFGK+ MQ+KLVPGNSAGTVT  YLKSPG+TWDEIDFEFLGN SG+PYTLHTNV+T GKGD+EQQF LWFDPTA+FHTY++LWNPQRI+F VDG+PIREFKN+ES G LFPKN+PMR+YSSLWNADDWATRGGL+KTDW++APFTASY+
Sbjct:    4 TYLLPLFLSLIITSSVSANFQRDVEITWGDGRGQIKNNGELLTLSLDKSSGSGFQSKNEYLFGKVSMQMKLVPGNSAGTVTTLYLKSPGTTWDEIDFEFLGNSSGEPYTLHTNVYTQGKGDKEQQFKLWFDPTANFHTYTILWNPQRIIFTVDGTPIREFKNMESLGTLFPKNKPMRMYSSLWNADDWATRGGLVKTDWSKAPFTASYR 212          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH21_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS=Arabidopsis thaliana GN=XTH21 PE=2 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 2.426e-93
Identity = 152/209 (72.73%), Postives = 179/209 (85.65%), Query Frame = 1
Query:   94 TLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            ++ + + +S L+V    +F QD DITWGDGRG ILNNG LL+L LD++SGSGFQSK+EYL+GK+DMQ+KLVPGNSAGTVT +YLKS G TWDEIDFEFLGN+SGDPY +HTNV+T GKGDREQQF+LWFDPTA FH YS+LWNP  IVFY+DG PIREFKNLE  GV +PKNQPMR+Y SLWNADDWATRGGL+KT+W+Q PF AS+ N
Sbjct:   10 SISLFLGLSILLVVHGKDFNQDIDITWGDGRGNILNNGTLLNLGLDQSSGSGFQSKAEYLYGKVDMQIKLVPGNSAGTVTTFYLKSQGLTWDEIDFEFLGNVSGDPYIVHTNVYTQGKGDREQQFYLWFDPTAAFHNYSILWNPSHIVFYIDGKPIREFKNLEVLGVAYPKNQPMRMYGSLWNADDWATRGGLVKTNWSQGPFVASFMN 218          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: BRU1_SOYBN (Brassinosteroid-regulated protein BRU1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 1.204e-92
Identity = 155/208 (74.52%), Postives = 177/208 (85.10%), Query Frame = 1
Query:   97 LLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            +L+ I +S+++   A +FYQDFD+TWG  R KI N GQLLSLSLDK SGSGF+SK EYLFG+IDMQLKLV GNSAGTVTAYYL S G T DEIDFEFLGNLSGDPY LHTN+FT GKG+REQQF+LWFDPT +FHTYS++W PQ I+F VD +PIR FKN E  GV FPKNQPMRIYSSLWNADDWATRGGL+KTDW++APFTA Y+N
Sbjct:   15 MLVGIVVSTMVATCAGSFYQDFDLTWGGDRAKIFNGGQLLSLSLDKVSGSGFKSKKEYLFGRIDMQLKLVAGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYILHTNIFTQGKGNREQQFYLWFDPTRNFHTYSIIWKPQHIIFLVDNTPIRVFKNAEPLGVPFPKNQPMRIYSSLWNADDWATRGGLVKTDWSKAPFTAYYRN 222          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH13_ARATH (Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS=Arabidopsis thaliana GN=XTH13 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 4.735e-89
Identity = 151/213 (70.89%), Postives = 179/213 (84.04%), Query Frame = 1
Query:   82 SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            +K   LL+S+ +  L+  SA +FY +FDITWG+GR  I+ +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLV GNSAGTVTAYYL S G TWDEIDFEFLGN++G PY LHTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASYK+
Sbjct:    6 TKQSLLLLSLLL--LISLSAGSFYDNFDITWGNGRANIVESGQLLTCTLDKISGSGFQSKKEYLFGKIDMKMKLVAGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVLHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYKS 216          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH14_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 14 OS=Arabidopsis thaliana GN=XTH14 PE=1 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 6.184e-89
Identity = 152/211 (72.04%), Postives = 172/211 (81.52%), Query Frame = 1
Query:   97 LLISIAISS---LMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            LL+S+ ++    ++ ASA NFY+ FDITWG+GR  I  NGQLL+ +LDK SGSGFQSK EYLFGKIDM+LKLV GNSAGTVTAYYL S G+ WDEIDFEFLGN +G PYT+HTNVFT GKGDRE QF LWFDPTADFHTY+V WNP  I+F VDG PIR FKN E NGV +PKNQPMRIYSSLW ADDWAT GG +K DW+ APF ASY+N
Sbjct:   10 LLLSLLLAIGFFVVAASAGNFYESFDITWGNGRANIFENGQLLTCTLDKVSGSGFQSKKEYLFGKIDMKLKLVAGNSAGTVTAYYLSSKGTAWDEIDFEFLGNRTGHPYTIHTNVFTGGKGDREMQFRLWFDPTADFHTYTVHWNPVNIIFLVDGIPIRVFKNNEKNGVAYPKNQPMRIYSSLWEADDWATEGGRVKIDWSNAPFKASYRN 220          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH12_ARATH (Probable xyloglucan endotransglucosylase/hydrolase protein 12 OS=Arabidopsis thaliana GN=XTH12 PE=2 SV=1)

HSP 1 Score: 323.553 bits (828), Expect = 6.837e-88
Identity = 149/213 (69.95%), Postives = 176/213 (82.63%), Query Frame = 1
Query:   82 SKNFTLLISIAISSLMVASASNFYQDFDITWGDGRGKILNNGQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            +K   LL++  +  + VA+ S FY  FDITWG GR  I  +GQLL+ +LDK SGSGFQSK EYLFGKIDM++KLVPGNSAGTVTAYYL S G TWDEIDFEFLGN++G PY +HTNVFT GKG+RE QF+LWFDPTADFHTY+VLWNP  I+F VDG PIR FKN E+NGV +PK+QPM+IYSSLW ADDWAT+GG +KTDWT APF+ASY++
Sbjct:    6 TKQSPLLLASLLILIGVATGS-FYDSFDITWGAGRANIFESGQLLTCTLDKTSGSGFQSKKEYLFGKIDMKIKLVPGNSAGTVTAYYLSSKGETWDEIDFEFLGNVTGQPYVIHTNVFTGGKGNREMQFYLWFDPTADFHTYTVLWNPLNIIFLVDGIPIRVFKNNEANGVAYPKSQPMKIYSSLWEADDWATQGGKVKTDWTNAPFSASYRS 217          
BLAST of CF836133 vs. ExPASy Swiss-Prot
Match: XTH20_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 20 OS=Arabidopsis thaliana GN=XTH20 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.788e-87
Identity = 143/195 (73.33%), Postives = 171/195 (87.69%), Query Frame = 1
Query:  139 ASNFYQDFDITWGDGRGKILNN-GQLLSLSLDKASGSGFQSKSEYLFGKIDMQLKLVPGNSAGTVTAYYLKSPGSTWDEIDFEFLGNLSGDPYTLHTNVFTNGKGDREQQFHLWFDPTADFHTYSVLWNPQRIVFYVDGSPIREFKNLESNGVLFPKNQPMRIYSSLWNADDWATRGGLIKTDWTQAPFTASYKN 720
            A +F++D  I WGDGRGKIL+N G LLSLSLDK SGSGFQS  E+L+GK+++Q+KLVPGNSAGTVT +YLKSPG+TWDEIDFEFLGN+SG PYTLHTNV+T G GD+EQQFHLWFDPT DFHTY ++WNPQR++F +DG PIREFKN E+ GV FPK+QPMR+Y+SLW A+ WATRGGL KTDW++APFTA Y+N
Sbjct:   26 AGSFHKDVQIHWGDGRGKILDNVGNLLSLSLDKFSGSGFQSHQEFLYGKVEVQMKLVPGNSAGTVTTFYLKSPGTTWDEIDFEFLGNISGHPYTLHTNVYTKGTGDKEQQFHLWFDPTVDFHTYCIIWNPQRVIFTIDGIPIREFKNSEALGVPFPKHQPMRLYASLWEAEHWATRGGLEKTDWSKAPFTAFYRN 220          
The following BLAST results are available for this feature:
BLAST of CF836133 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
XTH23_ARATH3.161e-10177.67Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH25_ARATH2.121e-9775.11Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH24_ARATH4.724e-9777.62Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH22_ARATH2.344e-9676.08Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH21_ARATH2.426e-9372.73Probable xyloglucan endotransglucosylase/hydrolase... [more]
BRU1_SOYBN1.204e-9274.52Brassinosteroid-regulated protein BRU1 OS=Glycine ... [more]
XTH13_ARATH4.735e-8970.89Putative xyloglucan endotransglucosylase/hydrolase... [more]
XTH14_ARATH6.184e-8972.04Xyloglucan endotransglucosylase/hydrolase protein ... [more]
XTH12_ARATH6.837e-8869.95Probable xyloglucan endotransglucosylase/hydrolase... [more]
XTH20_ARATH5.788e-8773.33Xyloglucan endotransglucosylase/hydrolase protein ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02H14_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02H14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836133 ID=CF836133; Name=CF836133; organism=Citrus sinensis; type=EST; length=722bp
GAGAGAGAGCCCTTAAATACCAACCCTTATAAGCTGCTTTCTGAAAACTC
CCTCTTTATTGATTGCAGTACTATGGCTTACTCGAAAAATTTTACCCTGC
TCATCTCTATAGCAATCAGCTCTTTGATGGTTGCTTCTGCTAGTAATTTC
TACCAAGACTTTGATATCACTTGGGGAGATGGCCGTGGTAAGATACTCAA
CAACGGCCAGCTTCTCTCCCTCTCCCTTGACAAAGCCTCAGGCTCAGGCT
TCCAGTCCAAGAGCGAGTACCTTTTTGGCAAAATCGACATGCAACTCAAG
CTTGTCCCTGGCAATTCTGCCGGCACAGTCACCGCCTACTACTTAAAATC
ACCAGGATCAACATGGGATGAGATAGACTTCGAATTCTTGGGGAATTTAA
GTGGTGATCCTTATACTCTTCATACTAATGTGTTCACAAATGGCAAAGGT
GACAGAGAGCAACAATTCCACCTCTGGTTTGACCCCACTGCTGACTTTCA
CACCTATTCCGTTCTCTGGAATCCCCAACGTATTGTCTTCTATGTTGATG
GCTCGCCAATTAGAGAGTTCAAGAACTTGGAATCAAACGGCGTACTCTTT
CCCAAAAACCAGCCGATGAGGATTTACTCGAGTCTCTGGAACGCCGATGA
CTGGGCCACGAGAGGTGGCCTTATCAAAACTGACTGGACCCAAGCTCCCT
TCACTGCTTCTTACAAAAACTT
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