CF836134
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836134 vs. ExPASy Swiss-Prot
Match: PUB6_ARATH (U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 3.177e-32 Identity = 78/123 (63.41%), Postives = 90/123 (73.17%), Query Frame = -1 Query: 195 IEQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGHQDDDSSEKLKPTYTPTPDHAPES--KPLCKSISRRK-MGKAFSFLWKSKSYSV 554 +EQEQAVSCL +LC G+E C QMVLQEGVIP+LVSISVNGS RGRDK+Q+LLMLFREQR RD P + ++ P P P APES KPL KSISRRK M + FSFLWK KS+S+ Sbjct: 650 VEQEQAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLMLFREQRHRDQPSPN--KEEAPRKTVSAPMAIPAPVSAPESEVKPLTKSISRRKTMTRPFSFLWK-KSHSI 769
BLAST of CF836134 vs. ExPASy Swiss-Prot
Match: PUB45_ARATH (U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 2.974e-30 Identity = 70/121 (57.85%), Postives = 88/121 (72.73%), Query Frame = -1 Query: 189 EQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQRDHPPVDIGHQDDDSSEKLKPTYTPTPDHAPESKPLCKSISRRKMGKAFSFLWKSKSYSVSQ 551 EQEQAVS L +LCN +E C +MVLQEGVIP+LVSISVNG+ RGR++AQ+LL LFRE RQRD + + +S + ++ E+KP CKS SR+KMG+AFSFLWKSKS+SV Q Sbjct: 649 EQEQAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRERAQKLLTLFRELRQRDQTHLTEPQHTEVTSP--EDGFSVASAAVTETKPQCKSASRKKMGRAFSFLWKSKSFSVYQ 767
BLAST of CF836134 vs. ExPASy Swiss-Prot
Match: PUB7_ARATH (U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7 PE=1 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 2.356e-27 Identity = 73/132 (55.30%), Postives = 87/132 (65.91%), Query Frame = -1 Query: 189 EQEQAVSCLFLLCNGNEKCCQMVLQEGVIPALVSISVNGSTRGRDKAQRLLMLFREQRQ--------RDHPPVDIGHQDDDSSEKLKPTYTPTPDHAPESKP--LCKSISRRK-MGKAFSFLWKSKSYSVSQ 551 EQEQAVSCL +LCNG E C QMVLQEGVIP+LVSISVNG+ RGR+K+Q+LLMLFRE+RQ RD PP + S+ TP + +P L KS+SRRK M + FSF WK KSYSV + Sbjct: 652 EQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGTPRGREKSQKLLMLFREERQQRDQPSSNRDEPPQKEPARKSLSAPLSVHGSTPASASVQDYEPRVLSKSMSRRKSMARPFSFFWK-KSYSVRE 782 The following BLAST results are available for this feature:
BLAST of CF836134 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836134 ID=CF836134; Name=CF836134; organism=Citrus sinensis; type=EST; length=554bpback to top |