CF836138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: SGAT_ARATH (Serine--glyoxylate aminotransferase OS=Arabidopsis thaliana GN=AGT1 PE=1 SV=2) HSP 1 Score: 324.324 bits (830), Expect = 3.945e-88 Identity = 154/177 (87.01%), Postives = 169/177 (95.48%), Query Frame = -2 Query: 185 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNNIPMIPSRI 715 +KS++VFFDW DY+KFY LGT+WPYTPSIQLLYGLRAALDLIFEEGLEN+I RH RLGKATRLAVEAWGLKNCTQKEEW S+TVTAV+VPPHI+ SEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLG++NELQLLGCLAGVEMILKDVGYPV +GSGVAAAS YLQ++IP+IPSRI Sbjct: 225 SKSLKVFFDWNDYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENIIARHARLGKATRLAVEAWGLKNCTQKEEWISNTVTAVMVPPHIDGSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGCLAGVEMILKDVGYPVVMGSGVAAASTYLQHHIPLIPSRI 401
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: SGAA_METEA (Serine--glyoxylate aminotransferase OS=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) GN=sgaA PE=3 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 5.569e-50 Identity = 100/165 (60.61%), Postives = 123/165 (74.55%), Query Frame = -2 Query: 209 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNN 703 RV+FDW+D K G F PYTP + LLYGLR AL +FEEGLENV RH LG+ATR AV AWGLK C + EW SDTVTA++ P +++++I++ A+ RYNL+LG GL++VAGKVFRIGH+G LNEL LLG +AG EM L D G V GSGVAAAS+YL+ N Sbjct: 234 RVYFDWEDQKKQNPTGYF-PYTPPLPLLYGLREALACLFEEGLENVYHRHAVLGEATRQAVAAWGLKTCAKSPEWNSDTVTAILAPEGVDAAKIIKHAYVRYNLALGAGLSQVAGKVFRIGHVGDLNELSLLGAIAGAEMSLIDNGVKVTPGSGVAAASSYLREN 397
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: SGAA_HYPME (Serine--glyoxylate aminotransferase OS=Hyphomicrobium methylovorum GN=sgaA PE=3 SV=2) HSP 1 Score: 186.037 bits (471), Expect = 1.677e-46 Identity = 93/165 (56.36%), Postives = 118/165 (71.52%), Query Frame = -2 Query: 209 RVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYLQNN 703 R FF ++D IK + G F+PYTP+ QLL GLR +LDL+F EGL+NV RH RL R AV+AWGLK C ++ +W+SDTV+A++VP I+S+ I + A+ RYN S GLGLNKVAGKVFRIGHLG L+E+ + G L EM LKD G +KLGSG AA+ Y N Sbjct: 226 RCFFSFEDMIKTNDQG-FFPYTPATQLLRGLRTSLDLLFAEGLDNVFARHTRLASGVRAAVDAWGLKLCAKEPKWYSDTVSAILVPEGIDSNAITKTAYYRYNTSFGLGLNKVAGKVFRIGHLGMLDEVMIGGALFAAEMALKDNGVNLKLGSGTGAAAEYFSKN 389
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: Y959_METJA (Uncharacterized aminotransferase MJ0959 OS=Methanocaldococcus jannaschii GN=MJ0959 PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.608e-26 Identity = 70/163 (42.94%), Postives = 94/163 (57.67%), Query Frame = -2 Query: 218 VRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYPVKLGSGVAAASAYL 706 V + D Y K+Y PYTPS+ L Y L ALDL+ EEG+EN ++RH RL KATR +EA G++ KE S TVT+ P I S+ +YN+ + G +AGK+FRIGH+G E ++L LA VE+ LK++G+ VK SGV A L Sbjct: 222 VGFYLDLLAYKKYYEEKKQTPYTPSVNLTYALNVALDLVLEEGIENRVKRHERLAKATRAGLEAMGIE-LFAKERARSVTVTSAKYPEGIEDSKFRGILSNKYNIVVAGGQKHLAGKIFRIGHMGICGEKEVLATLACVELALKELGFEVK-ESGVEVAKEVL 382
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: DHSS_SYNP1 (Soluble hydrogenase, small subunit OS=Synechococcus sp. (strain PCC 6716) PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 51/144 (35.42%), Postives = 87/144 (60.42%), Query Frame = -2 Query: 218 PYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYP-VKLGSGVAAASAYL 646 P+TP + L + L+ AL+++ EGLE + +RH+RL +ATR A++A L + S +TAV P + + I +R++++L G + + G++FRIGHLG + + +L ++ +E +L ++GY G+GVAAAS L Sbjct: 240 PFTPPVNLFFALKTALEMMQAEGLEAIFQRHQRLMQATRAAMKALNLP-LYAADSCASPAITAV-APQGVEAENIRSLMKKRFDIALAGGQDHLKGQIFRIGHLGFVGDRDILAAVSALEAVLAELGYTNFTPGAGVAAASRVL 381
BLAST of CF836138 vs. ExPASy Swiss-Prot
Match: DHSS_ANACY (Soluble hydrogenase 42 kDa subunit OS=Anabaena cylindrica PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.252e-17 Identity = 55/169 (32.54%), Postives = 95/169 (56.21%), Query Frame = -2 Query: 212 AKSVRVFFDWKDYIKFYNLGTFWPYTPSIQLLYGLRAALDLIFEEGLENVIERHRRLGKATRLAVEAWGLKNCTQKEEWFSDTVTAVIVPPHINSSEIVRRAWQRYNLSLGLGLNKVAGKVFRIGHLGHLNELQLLGCLAGVEMILKDVGYP-VKLGSGVAAASAYLQN 715 AK + + D Y K T P+TP + L+ L L ++ +EGLE++ RH R ATR A++A L +E S +TAV P + + +I +R++++L G + ++ K+FR+GHLG +++ +L C+A +E++L ++G+ G+GVAAA+ N Sbjct: 218 AKLPKYYLDLGKYRKATAKNTT-PFTPPVNLMVALHTTLGMMKKEGLESIFTRHERQKNATRAAMKALNLP-LFAADECASPAITAVATPG-MEADKIRSLMKKRFDIALAGGQDHLSNKIFRVGHLGFVSDRDILSCIASLEVVLLELGHENFNSGAGVAAAARVFSN 383 The following BLAST results are available for this feature:
BLAST of CF836138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF836138 ID=CF836138; Name=CF836138; organism=Citrus sinensis; type=EST; length=716bpback to top |