CF836158

Overview
NameCF836158
Unique NameCF836158
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3666 contig Csv1_Contig3666:120..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 363.614 bits (932), Expect = 6.926e-100
Identity = 159/212 (75.00%), Postives = 175/212 (82.55%), Query Frame = -3
Query:  152 FLTLYLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 787
            F+    T    ATF+I NNCP+TVWAAAVPGGG+RLDRGQNW +N   GTK AR+W RT C FDGAGRG+CQTGDC GLLQCQA+G PPNTLAE+ALNQF NLDF DIS +DGFNV MEFS  SGGC R I+CTADI GQCPNELR PGGCN PC VFKT+++CCNSG CG T FS+FFK+RCPDAYSYPKDD TS FTCP GTNYKVVFCP
Sbjct:   14 FIAFLFTCARGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.355e-87
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = -3
Query:  152 ATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 754
            A F+I N C YTVWAA+VP GGG +L+ GQ+W ++V  GTK AR+WART C FDG+GRG CQTGDCGG+L C+AYG+PPNTLAE+ LN F NLDF DIS +DGFNVPM+FS  S GC R I CTADI GQCP+EL+  GGCN PC VFKT+++CCNSG CGPT +SRFFK+RCPDAYSYPKDD  S FTC GGT+Y+VVFCP
Sbjct:    1 ARFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.311e-87
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = -3
Query:  152 FLTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 787
            FL  ++T+  AATF++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK ARIW RTNC FDG GRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:    3 FLLAFVTYTYAATFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 2.311e-87
Identity = 145/216 (67.13%), Postives = 168/216 (77.78%), Query Frame = -3
Query:  152 FLTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 787
            FL  ++T+  AAT ++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK ARIW RTNC FDGAGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   11 FLLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 321.627 bits (823), Expect = 3.018e-87
Identity = 145/210 (69.05%), Postives = 166/210 (79.05%), Query Frame = -3
Query:  152 YLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 775
            ++   +AATFDI N C YTVWAAA PGGGRRLD GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG  PNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E+CC +  G CGPT  SRFFKERCPDAYSYP+DD TS+FTCP GTNY+VVFCP
Sbjct:   19 FVAVTHAATFDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 317.775 bits (813), Expect = 4.359e-86
Identity = 142/216 (65.74%), Postives = 168/216 (77.78%), Query Frame = -3
Query:  152 FLTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 787
            FL   +T+  AAT ++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK AR+W RTNC F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF  LDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP ELRVPGGCN PC  F  +++CC  G CGPT FS+FFK+RCPDAYSYP+DD TS FTCPGG TNY+V+FCP
Sbjct:   11 FLLALVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 315.464 bits (807), Expect = 2.163e-85
Identity = 143/211 (67.77%), Postives = 166/211 (78.67%), Query Frame = -3
Query:  152 LYLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGK--CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 778
            L ++   AATF+I N C YTVWAAA PGGGRRLD GQ+W L+V  GTK ARIW RTNC FD +GRGRCQTGDC G LQC  +G PPNTLAE+ALNQF NLDF DIS +DGFN+PMEFS  S  C+R++ CTADI GQCPN LR PGGCN PC VF+T ++CC +G+  C  T++SRFFK+RCPDAYSYP+DD TS FTC   TNY+VVFCP
Sbjct:   15 LLISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCP 223          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 314.694 bits (805), Expect = 3.690e-85
Identity = 142/210 (67.62%), Postives = 164/210 (78.10%), Query Frame = -3
Query:  152 YLTWVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 775
            ++   +AATFDI N C YTVWAAA PGGGR+L+ GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG PPNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E CC +  G CGPT  SRFFK RCPDAYSYP+DD  S+FTCP GTNY+VVFCP
Sbjct:   19 FVAVTHAATFDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.392e-84
Identity = 140/216 (64.81%), Postives = 166/216 (76.85%), Query Frame = -3
Query:  152 FLTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 787
            F  L +T+  AAT ++RNNCPYTVWAA+ P GGGRRL+RGQ W +N   GTK ARIW RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCPGG TNY+VVFCP
Sbjct:   11 FFLLCVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CF836158 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 2.239e-82
Identity = 136/215 (63.26%), Postives = 164/215 (76.28%), Query Frame = -3
Query:  152 LTLYLTWVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 784
            L  ++T+  AAT ++RNNCPYTVWAA+ P GGGRRL++GQ W +N   GTK ARIW RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    S G    I CTA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:   12 LLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
The following BLAST results are available for this feature:
BLAST of CF836158 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE6.926e-10075.00Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
P21_SOYBN1.355e-8769.80Protein P21 OS=Glycine max PE=1 SV=1[more]
TPM1_SOLLC2.311e-8767.13Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
OS13_SOLCO2.311e-8767.13Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
PRR1_TOBAC3.018e-8769.05Pathogenesis-related protein R major form OS=Nicot... [more]
OSMO_TOBAC4.359e-8665.74Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
OSL3_ARATH2.163e-8567.77Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
PRR2_TOBAC3.690e-8567.62Pathogenesis-related protein R minor form OS=Nicot... [more]
NP24_SOLLC2.392e-8464.81Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS81_SOLCO2.239e-8263.26Osmotin-like protein OSML81 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I05_f Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836158 ID=CF836158; Name=CF836158; organism=Citrus sinensis; type=EST; length=789bp
AACTCTACTTTAGAAGATTTATTAATGCCTCACGGCTTGAAGCCACAAAG
GCAAATTAAAGCCTTATTCCTTACACATATATTGCAGCGACCTTACAACG
TATAGCAGATAATTCCAACCAACAAATGATAGGCAGCTGATTCAATCTTC
ACGGGCAGAACACAACCTTATAATTAGTCCCACCAGGACAAGTGAAGACG
CTTGTTGCATCATCTTTAGGGTAACTATAAGCATCCGGGCACCTTTCCTT
GAAAAACCTGGAGAATTTTGTAGGTCCACATTTGCCTGAATTGCAACAGT
GCTCTTCGGTCTTGAACACGGGACATGGCCCATTACATCCTCCGGGAACC
CTCAATTCATTCGGGCACTGCCCGACAATATCAGCCGTACATCTAATCAC
ACGGTTGCATCCTCCGGACACCGAACTGAATTCCATAGGAACATTAAACC
CATCAATGTTCGAAATATCAATAAAATCCAAGTTTTGGAACTGGTTTAGT
GCAAATTCAGCTAAGGTGTTGGGGGGTGAGCCATAGGCTTGACATTGGAG
TAGTCCCCCACAGTCACCAGTCTGGCACCGCCCGCGCCCGGCTCCATCGA
ATTGGCAGTTCGTCCTAGCCCAGATGCGGGCTGCCTTGGTGCCGGGGTTG
ACATTAAGGGGCCAGTTTTGGCCACGGTCGAGTCTCCTGCCTCCGCCTGG
CACTGCTGCAGCCCAGACCGTGTAGGGGCAATTGTTTCTGATATCGAAAG
TGGCTGCGTTGACCCAAGTTAAGTATAGGGTGAGAAAAA
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