CF836159

Overview
NameCF836159
Unique NameCF836159
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Washington Navel Orange Shoot Meristem cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3666 contig Csv1_Contig3666:193..934. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: TLP_ACTDE (Thaumatin-like protein OS=Actinidia deliciosa GN=tlp PE=1 SV=2)

HSP 1 Score: 368.237 bits (944), Expect = 2.555e-101
Identity = 162/221 (73.30%), Postives = 181/221 (81.90%), Query Frame = 2
Query:    2 RSLLNASFLFLTLYLTLVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 664
            +SL  ++ LF+    T    ATF+I NNCP+TVWAAAVPGGG+RLDRGQNW +N   GTK AR+W RT C FDGAGRG+CQTGDC GLLQCQA+G PPNTLAE+ALNQF NLDF DIS +DGFNV MEFS  SGGC R I+CTADI GQCPNELR PGGCN PC VFKT+++CCNSG CG T FS+FFK+RCPDAYSYPKDD TS FTCP GTNYKVVFCP
Sbjct:    5 KSLSLSALLFIAFLFTCARGATFNIINNCPFTVWAAAVPGGGKRLDRGQNWIINPGAGTKGARVWPRTGCNFDGAGRGKCQTGDCNGLLQCQAFGQPPNTLAEYALNQFNNLDFFDISLVDGFNVAMEFSPTSGGCTRGIKCTADINGQCPNELRAPGGCNNPCTVFKTDQYCCNSGNCGLTNFSKFFKDRCPDAYSYPKDDQTSTFTCPAGTNYKVVFCP 225          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: PRR1_TOBAC (Pathogenesis-related protein R major form OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 4.231e-88
Identity = 149/218 (68.35%), Postives = 170/218 (77.98%), Query Frame = 2
Query:   20 SFLFLTLYLTLV-NAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 664
            +FL+   Y   V +AATFDI N C YTVWAAA PGGGRRLD GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG  PNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E+CC +  G CGPT  SRFFKERCPDAYSYP+DD TS+FTCP GTNY+VVFCP
Sbjct:   11 AFLYFGQYFVAVTHAATFDIVNKCTYTVWAAASPGGGRRLDSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKAPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEYCCTNGPGSCGPTDLSRFFKERCPDAYSYPQDDPTSLFTCPSGTNYRVVFCP 226          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: TPM1_SOLLC (Osmotin-like protein TPM-1 (Fragment) OS=Solanum lycopersicum GN=TPM-1 PE=2 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 9.426e-88
Identity = 146/218 (66.97%), Postives = 168/218 (77.06%), Query Frame = 2
Query:   23 FLFLTLYLTLVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 664
            F FL  ++T   AATF++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK ARIW RTNC FDG GRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:    1 FFFLLAFVTYTYAATFEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGDGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 218          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: P21_SOYBN (Protein P21 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.231e-87
Identity = 141/202 (69.80%), Postives = 165/202 (81.68%), Query Frame = 2
Query:   62 ATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 664
            A F+I N C YTVWAA+VP GGG +L+ GQ+W ++V  GTK AR+WART C FDG+GRG CQTGDCGG+L C+AYG+PPNTLAE+ LN F NLDF DIS +DGFNVPM+FS  S GC R I CTADI GQCP+EL+  GGCN PC VFKT+++CCNSG CGPT +SRFFK+RCPDAYSYPKDD  S FTC GGT+Y+VVFCP
Sbjct:    1 ARFEITNRCTYTVWAASVPVGGGVQLNPGQSWSVDVPAGTKGARVWARTGCNFDGSGRGGCQTGDCGGVLDCKAYGAPPNTLAEYGLNGFNNLDFFDISLVDGFNVPMDFSPTSNGCTRGISCTADINGQCPSELKTQGGCNNPCTVFKTDQYCCNSGSCGPTDYSRFFKQRCPDAYSYPKDDPPSTFTCNGGTDYRVVFCP 202          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: OS13_SOLCO (Osmotin-like protein OSML13 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 322.783 bits (826), Expect = 1.231e-87
Identity = 148/223 (66.37%), Postives = 172/223 (77.13%), Query Frame = 2
Query:   11 LNASFLFLTL-YLTLVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 664
            L +SF+F  L ++T   AAT ++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK ARIW RTNC FDGAGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP  LRVPGGCN PC  F  +++CC  G CGPT  SRFFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:    4 LRSSFVFFLLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARIWGRTNCNFDGAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPGSLRVPGGCNNPCTTFGGQQYCCTQGPCGPTDLSRFFKQRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: OSL3_ARATH (Osmotin-like protein OSM34 OS=Arabidopsis thaliana GN=OSM34 PE=2 SV=2)

HSP 1 Score: 319.701 bits (818), Expect = 1.042e-86
Identity = 148/223 (66.37%), Postives = 174/223 (78.03%), Query Frame = 2
Query:    5 SLLNASFLFLTLYL-TLVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGK--CGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 664
            +LL ++F+F  L L +   AATF+I N C YTVWAAA PGGGRRLD GQ+W L+V  GTK ARIW RTNC FD +GRGRCQTGDC G LQC  +G PPNTLAE+ALNQF NLDF DIS +DGFN+PMEFS  S  C+R++ CTADI GQCPN LR PGGCN PC VF+T ++CC +G+  C  T++SRFFK+RCPDAYSYP+DD TS FTC   TNY+VVFCP
Sbjct:    3 NLLVSTFIFSALLLISTATAATFEILNQCSYTVWAAASPGGGRRLDAGQSWRLDVAAGTKMARIWGRTNCNFDSSGRGRCQTGDCSGGLQCTGWGQPPNTLAEYALNQFNNLDFYDISLVDGFNIPMEFSPTSSNCHRIL-CTADINGQCPNVLRAPGGCNNPCTVFQTNQYCCTNGQGSCSDTEYSRFFKQRCPDAYSYPQDDPTSTFTCT-NTNYRVVFCP 223          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: OSMO_TOBAC (Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2)

HSP 1 Score: 319.316 bits (817), Expect = 1.361e-86
Identity = 146/223 (65.47%), Postives = 172/223 (77.13%), Query Frame = 2
Query:   11 LNASFLFLTLYL-TLVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEF--SSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 664
            L +SF+F  L L T   AAT ++RNNCPYTVWAA+ P GGGRRLDRGQ W +N   GTK AR+W RTNC F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF  LDF DIS +DGFN+PM F  ++ SGG    I CTA+I G+CP ELRVPGGCN PC  F  +++CC  G CGPT FS+FFK+RCPDAYSYP+DD TS FTCPGG TNY+V+FCP
Sbjct:    4 LRSSFVFFLLALVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLDRGQTWVINAPRGTKMARVWGRTNCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSGLDFWDISLVDGFNIPMTFAPTNPSGGKCHAIHCTANINGECPRELRVPGGCNNPCTTFGGQQYCCTQGPCGPTFFSKFFKQRCPDAYSYPQDDPTSTFTCPGGSTNYRVIFCP 226          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: PRR2_TOBAC (Pathogenesis-related protein R minor form OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 316.62 bits (810), Expect = 8.822e-86
Identity = 144/218 (66.06%), Postives = 167/218 (76.61%), Query Frame = 2
Query:   17 ASFLFLTLYLTLVNAATFDIRNNCPYTVWAAAVPGGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSVSGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNS--GKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGGTNYKVVFCP 664
            A   F   ++ + +AATFDI N C YTVWAAA PGGGR+L+ GQ+W +NVNPGT  ARIW RTNC FDG+GRG C+TGDC G+L+CQ YG PPNTLAEFALNQ  N DF+DIS +DGFN+PMEFS  +GGC R +RCTA I  QCP +L+  GGCN PC V KT E CC +  G CGPT  SRFFK RCPDAYSYP+DD  S+FTCP GTNY+VVFCP
Sbjct:   11 AFLCFGQYFVAVTHAATFDIVNQCTYTVWAAASPGGGRQLNSGQSWSINVNPGTVQARIWGRTNCNFDGSGRGNCETGDCNGMLECQGYGKPPNTLAEFALNQ-PNQDFVDISLVDGFNIPMEFSPTNGGC-RNLRCTAPINEQCPAQLKTQGGCNNPCTVIKTNEFCCTNGPGSCGPTDLSRFFKARCPDAYSYPQDDPPSLFTCPPGTNYRVVFCP 226          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: NP24_SOLLC (Protein NP24 OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 313.538 bits (802), Expect = 7.469e-85
Identity = 144/223 (64.57%), Postives = 170/223 (76.23%), Query Frame = 2
Query:   11 LNASF-LFLTLYLTLVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCPGG-TNYKVVFCP 664
            L +SF LF  L +T   AAT ++RNNCPYTVWAA+ P GGGRRL+RGQ W +N   GTK ARIW RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    SGG    I CTA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCPGG TNY+VVFCP
Sbjct:    4 LTSSFVLFFLLCVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLNRGQTWVINAPRGTKMARIWGRTGCNFNAAGRGTCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSGGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPGGSTNYRVVFCP 226          
BLAST of CF836159 vs. ExPASy Swiss-Prot
Match: OS81_SOLCO (Osmotin-like protein OSML81 OS=Solanum commersonii PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 2.403e-83
Identity = 140/223 (62.78%), Postives = 169/223 (75.78%), Query Frame = 2
Query:   11 LNASFLF-LTLYLTLVNAATFDIRNNCPYTVWAAAVP-GGGRRLDRGQNWPLNVNPGTKAARIWARTNCQFDGAGRGRCQTGDCGGLLQCQAYGSPPNTLAEFALNQFQNLDFIDISNIDGFNVPMEFSSV--SGGCNRVIRCTADIVGQCPNELRVPGGCNGPCPVFKTEEHCCNSGKCGPTKFSRFFKERCPDAYSYPKDDATSVFTCP-GGTNYKVVFCP 664
            L +SF+F L  ++T   AAT ++RNNCPYTVWAA+ P GGGRRL++GQ W +N   GTK ARIW RT C F+ AGRG CQTGDCGG+LQC  +G PPNTLAE+AL+QF NLDF DIS +DGFN+PM F+    S G    I CTA+I G+CP  L+VPGGCN PC  F  +++CC  G CGPT+ S+FFK+RCPDAYSYP+DD TS FTCP G TNY+VVFCP
Sbjct:    4 LRSSFIFSLLAFVTYTYAATIEVRNNCPYTVWAASTPIGGGRRLNKGQTWVINAPRGTKMARIWGRTGCNFNAAGRGSCQTGDCGGVLQCTGWGKPPNTLAEYALDQFSNLDFWDISLVDGFNIPMTFAPTKPSAGKCHAIHCTANINGECPRALKVPGGCNNPCTTFGGQQYCCTQGPCGPTELSKFFKKRCPDAYSYPQDDPTSTFTCPSGSTNYRVVFCP 226          
The following BLAST results are available for this feature:
BLAST of CF836159 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
TLP_ACTDE2.555e-10173.30Thaumatin-like protein OS=Actinidia deliciosa GN=t... [more]
PRR1_TOBAC4.231e-8868.35Pathogenesis-related protein R major form OS=Nicot... [more]
TPM1_SOLLC9.426e-8866.97Osmotin-like protein TPM-1 (Fragment) OS=Solanum l... [more]
P21_SOYBN1.231e-8769.80Protein P21 OS=Glycine max PE=1 SV=1[more]
OS13_SOLCO1.231e-8766.37Osmotin-like protein OSML13 OS=Solanum commersonii... [more]
OSL3_ARATH1.042e-8666.37Osmotin-like protein OSM34 OS=Arabidopsis thaliana... [more]
OSMO_TOBAC1.361e-8665.47Osmotin OS=Nicotiana tabacum GN=AP24 PE=1 SV=2[more]
PRR2_TOBAC8.822e-8666.06Pathogenesis-related protein R minor form OS=Nicot... [more]
NP24_SOLLC7.469e-8564.57Protein NP24 OS=Solanum lycopersicum PE=1 SV=2[more]
OS81_SOLCO2.403e-8362.78Osmotin-like protein OSML81 OS=Solanum commersonii... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS03_02I05_r Washington Navel Orange Shoot Meristem cDNA Library Citrus sinensis cDNA clone CS_PEa02I05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF836159 ID=CF836159; Name=CF836159; organism=Citrus sinensis; type=EST; length=742bp
ACGATCTTTATTAAATGCATCCTTCCTTTTTCTCACCCTATACTTAACTT
TGGTCAACGCAGCCACTTTCGATATCAGAAACAATTGCCCCTACACGGTC
TGGGCTGCAGCAGTGCCAGGCGGAGGCAGGAGACTCGACCGTGGCCAAAA
CTGGCCCCTTAATGTCAACCCCGGCACCAAGGCAGCCCGCATCTGGGCTA
GGACGAACTGCCAATTCGATGGAGCCGGGCGCGGGCGGTGCCAGACTGGT
GACTGTGGGGGACTACTCCAATGTCAAGCCTATGGCTCACCCCCCAACAC
CTTAGCTGAATTTGCACTAAACCAGTTCCAAAACTTGGATTTTATTGATA
TTTCGAACATTGATGGGTTTAATGTTCCTATGGAATTCAGTTCGGTGTCC
GGAGGATGCAACCGTGTGATTAGATGTACGGCTGATATTGTCGGGCAGTG
CCCGAATGAATTGAGGGTTCCCGGAGGATGTAATGGGCCATGTCCCGTGT
TCAAGACCGAAGAGCACTGTTGCAATTCAGGCAAATGTGGACCTACAAAA
TTCTCCAGGTTTTTCAAGGAAAGGTGCCCGGATGCTTATAGTTACCCTAA
AGATGATGCAACAAGCGTCTTCACTTGTCCTGGTGGGACTAATTATAAGG
TTGTGTTCTGCCCGTGAAGATTGAATCAGCTGCCTATCATTTGTTGGTTG
GAATTATCTGCTATACGTTGTAAGGTCGCTGCAATATATGTG
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